RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 RTL9Q8NET4 1388 aa18.87■□□□□ 0.61
DDX39A-211ENST00000590239 NRXN2Q9P2S2 1712 aa18.87■□□□□ 0.61
DDX39A-211ENST00000590239 SF3B3Q15393 1217 aaKnown RBP18.86■□□□□ 0.61
DDX39A-211ENST00000590239 GCC1Q96CN9 775 aa18.86■□□□□ 0.61
DDX39A-211ENST00000590239 NLRP3Q96P20 1036 aa18.86■□□□□ 0.61
DDX39A-211ENST00000590239 DCTPP1Q9H773 170 aa18.86■□□□□ 0.61
DDX39A-211ENST00000590239 MYH3P11055 1940 aa18.86■□□□□ 0.61
DDX39A-211ENST00000590239 CCDC152Q4G0S7 254 aa18.85■□□□□ 0.61
DDX39A-211ENST00000590239 SMC5Q8IY18 1101 aa18.85■□□□□ 0.61
DDX39A-211ENST00000590239 MTFR1LQ9H019 292 aa18.85■□□□□ 0.61
DDX39A-211ENST00000590239 NOP58Q9Y2X3 529 aaKnown RBP18.85■□□□□ 0.61
DDX39A-211ENST00000590239 CHMP3Q9Y3E7 222 aa18.85■□□□□ 0.61
DDX39A-211ENST00000590239 RFX5P48382 616 aaPredicted RBP18.84■□□□□ 0.61
DDX39A-211ENST00000590239 IFIT5Q13325 482 aaKnown RBP18.84■□□□□ 0.61
DDX39A-211ENST00000590239 CCDC57Q2TAC2 916 aa18.84■□□□□ 0.61
DDX39A-211ENST00000590239 FAM161AQ3B820 660 aa18.84■□□□□ 0.61
DDX39A-211ENST00000590239 COPRSQ9NQ92 184 aa18.84■□□□□ 0.61
DDX39A-211ENST00000590239 HSP90AB4PQ58FF6 505 aa18.83■□□□□ 0.6
DDX39A-211ENST00000590239 BRIP1Q9BX63 1249 aa18.83■□□□□ 0.6
DDX39A-211ENST00000590239 GREM2Q9H772 168 aa18.83■□□□□ 0.6
DDX39A-211ENST00000590239 ANKRD18BA2A2Z9 1011 aa18.82■□□□□ 0.6
DDX39A-211ENST00000590239 KLRG2A4D1S0 409 aaPredicted RBP18.82■□□□□ 0.6
DDX39A-211ENST00000590239 PSDA5PKW4 1024 aaPredicted RBP18.82■□□□□ 0.6
DDX39A-211ENST00000590239 PTPN12Q05209 780 aaKnown RBP18.82■□□□□ 0.6
DDX39A-211ENST00000590239 C3orf67Q6ZVT6 689 aa18.82■□□□□ 0.6
DDX39A-211ENST00000590239 CCDC24Q8N4L8 307 aa18.82■□□□□ 0.6
DDX39A-211ENST00000590239 SURF6O75683 361 aaKnown RBP18.81■□□□□ 0.6
DDX39A-211ENST00000590239 ZBTB7AO95365 584 aa18.81■□□□□ 0.6
DDX39A-211ENST00000590239 ITGA6P23229 1130 aa18.81■□□□□ 0.6
DDX39A-211ENST00000590239 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
DDX39A-211ENST00000590239 RAB11FIP3O75154 756 aa18.8■□□□□ 0.6
DDX39A-211ENST00000590239 CRY2Q49AN0 593 aa18.8■□□□□ 0.6
DDX39A-211ENST00000590239 CCDC85AQ96PX6 553 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-211ENST00000590239 TNRC6CQ9HCJ0 1690 aaKnown RBP18.79■□□□□ 0.6
DDX39A-211ENST00000590239 CIAO1O76071 339 aa18.79■□□□□ 0.6
DDX39A-211ENST00000590239 POLD1P28340 1107 aa18.79■□□□□ 0.6
DDX39A-211ENST00000590239 PDE6BP35913 854 aa18.79■□□□□ 0.6
DDX39A-211ENST00000590239 G3BP1Q13283 466 aaKnown RBP eCLIP18.79■□□□□ 0.6
DDX39A-211ENST00000590239 TAF7LQ5H9L4 462 aa18.79■□□□□ 0.6
DDX39A-211ENST00000590239 ERC1Q8IUD2 1116 aa18.79■□□□□ 0.6
DDX39A-211ENST00000590239 CDC5LQ99459 802 aaKnown RBP18.79■□□□□ 0.6
DDX39A-211ENST00000590239 PA2G4Q9UQ80 394 aaKnown RBP18.79■□□□□ 0.6
DDX39A-211ENST00000590239 EXOC6BQ9Y2D4 811 aa18.79■□□□□ 0.6
DDX39A-211ENST00000590239 KLHDC4Q8TBB5 520 aa18.78■□□□□ 0.6
DDX39A-211ENST00000590239 PDZRN3Q9UPQ7 1066 aa18.78■□□□□ 0.6
DDX39A-211ENST00000590239 ATF5Q9Y2D1 282 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-211ENST00000590239 EYA2O00167 538 aa18.77■□□□□ 0.6
DDX39A-211ENST00000590239 HOXA10P31260 410 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-211ENST00000590239 NUCB1Q02818 461 aa18.77■□□□□ 0.6
DDX39A-211ENST00000590239 IFFO2Q5TF58 517 aa18.77■□□□□ 0.6
DDX39A-211ENST00000590239 DDX46Q7L014 1031 aaKnown RBP18.77■□□□□ 0.6
DDX39A-211ENST00000590239 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
DDX39A-211ENST00000590239 SEC31BQ9NQW1 1179 aa18.77■□□□□ 0.6
DDX39A-211ENST00000590239 C10orf71Q711Q0 1435 aa18.76■□□□□ 0.59
DDX39A-211ENST00000590239 ANKRD31Q8N7Z5 1873 aa18.76■□□□□ 0.59
DDX39A-211ENST00000590239 OS9Q13438 667 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-211ENST00000590239 KIF1BPQ96EK5 621 aa18.76■□□□□ 0.59
DDX39A-211ENST00000590239 ZNF594Q96JF6 807 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-211ENST00000590239 IGHMBP2P38935 993 aaKnown RBP18.75■□□□□ 0.59
DDX39A-211ENST00000590239 IL15P40933 162 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-211ENST00000590239 ANKRD45Q5TZF3 282 aa18.75■□□□□ 0.59
DDX39A-211ENST00000590239 LDHAL6AQ6ZMR3 332 aa18.75■□□□□ 0.59
DDX39A-211ENST00000590239 ANKRD18AQ8IVF6 992 aa18.75■□□□□ 0.59
DDX39A-211ENST00000590239 RBM17Q96I25 401 aaKnown RBP18.75■□□□□ 0.59
DDX39A-211ENST00000590239 SGIP1Q9BQI5 828 aa18.75■□□□□ 0.59
DDX39A-211ENST00000590239 LRRCC1Q9C099 1032 aa18.75■□□□□ 0.59
DDX39A-211ENST00000590239 SIL1Q9H173 461 aa18.75■□□□□ 0.59
DDX39A-211ENST00000590239 ZBTB47Q9UFB7 747 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-211ENST00000590239 SRGNP10124 158 aa18.74■□□□□ 0.59
DDX39A-211ENST00000590239 NPR1P16066 1061 aa18.74■□□□□ 0.59
DDX39A-211ENST00000590239 RPS8P62241 208 aaKnown RBP18.74■□□□□ 0.59
DDX39A-211ENST00000590239 ATG9AQ7Z3C6 839 aa18.74■□□□□ 0.59
DDX39A-211ENST00000590239 CHD1LQ86WJ1 897 aa18.74■□□□□ 0.59
DDX39A-211ENST00000590239 RHPN1Q8TCX5 695 aa18.74■□□□□ 0.59
DDX39A-211ENST00000590239 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
DDX39A-211ENST00000590239 PTGER2P43116 358 aa18.73■□□□□ 0.59
DDX39A-211ENST00000590239 GRAPQ13588 217 aa18.73■□□□□ 0.59
DDX39A-211ENST00000590239 GRAPLQ8TC17 118 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-211ENST00000590239 MPHOSPH8Q99549 860 aa18.73■□□□□ 0.59
DDX39A-211ENST00000590239 CNNM1Q9NRU3 951 aa18.73■□□□□ 0.59
DDX39A-211ENST00000590239 RIPOR2Q9Y4F9 1068 aa18.73■□□□□ 0.59
DDX39A-211ENST00000590239 H0YIN7 160 aa18.72■□□□□ 0.59
DDX39A-211ENST00000590239 APBB1O00213 710 aa18.72■□□□□ 0.59
DDX39A-211ENST00000590239 SASH1O94885 1247 aa18.72■□□□□ 0.59
DDX39A-211ENST00000590239 YY1P25490 414 aa18.72■□□□□ 0.59
DDX39A-211ENST00000590239 LRRC24Q50LG9 513 aa18.72■□□□□ 0.59
DDX39A-211ENST00000590239 C2CD5Q86YS7 1000 aa18.72■□□□□ 0.59
DDX39A-211ENST00000590239 CELF1Q92879 486 aaKnown RBP18.72■□□□□ 0.59
DDX39A-211ENST00000590239 PUS3Q9BZE2 481 aaKnown RBP18.72■□□□□ 0.59
DDX39A-211ENST00000590239 SPON1Q9HCB6 807 aa18.72■□□□□ 0.59
DDX39A-211ENST00000590239 BSDC1Q9NW68 430 aaPredicted RBP18.72■□□□□ 0.59
DDX39A-211ENST00000590239 BBOX1O75936 387 aa18.71■□□□□ 0.59
DDX39A-211ENST00000590239 STYK1Q6J9G0 422 aa18.71■□□□□ 0.59
DDX39A-211ENST00000590239 MASTLQ96GX5 879 aa18.71■□□□□ 0.59
DDX39A-211ENST00000590239 MROH5Q6ZUA9 1318 aa18.71■□□□□ 0.59
DDX39A-211ENST00000590239 KIF13BQ9NQT8 1826 aa18.7■□□□□ 0.58
DDX39A-211ENST00000590239 TMC4Q7Z404 712 aa18.7■□□□□ 0.58
DDX39A-211ENST00000590239 LNPKQ9C0E8 428 aa18.7■□□□□ 0.58
DDX39A-211ENST00000590239 GPR108Q9NPR9 543 aa18.7■□□□□ 0.58
DDX39A-211ENST00000590239 CEP126Q9P2H0 1117 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms