RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 TWISTNBQ3B726 338 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-210ENST00000590061 CCDC30Q5VVM6 783 aa9.35□□□□□ -0.91
SMAD4-210ENST00000590061 FMNL2Q96PY5 1086 aa9.35□□□□□ -0.91
SMAD4-210ENST00000590061 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
SMAD4-210ENST00000590061 CACNA1FO60840 1977 aa9.35□□□□□ -0.91
SMAD4-210ENST00000590061 CANXP27824 592 aaKnown RBP9.34□□□□□ -0.91
SMAD4-210ENST00000590061 RXRBP28702 533 aa9.34□□□□□ -0.91
SMAD4-210ENST00000590061 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
SMAD4-210ENST00000590061 ARHGAP45Q92619 1136 aa9.34□□□□□ -0.91
SMAD4-210ENST00000590061 ERBB4Q15303 1308 aa9.33□□□□□ -0.92
SMAD4-210ENST00000590061 EIF5BO60841 1220 aaKnown RBP9.33□□□□□ -0.92
SMAD4-210ENST00000590061 SNRPA1P09661 255 aaKnown RBP9.33□□□□□ -0.92
SMAD4-210ENST00000590061 EXOSC9Q06265 439 aaKnown RBP9.33□□□□□ -0.92
SMAD4-210ENST00000590061 DCTN1Q14203 1278 aa9.33□□□□□ -0.92
SMAD4-210ENST00000590061 PDE3AQ14432 1141 aa9.33□□□□□ -0.92
SMAD4-210ENST00000590061 ZNF790Q6PG37 636 aa9.33□□□□□ -0.92
SMAD4-210ENST00000590061 FAM196AQ6ZSG2 479 aa9.33□□□□□ -0.92
SMAD4-210ENST00000590061 ANKLE1Q8NAG6 615 aa9.33□□□□□ -0.92
SMAD4-210ENST00000590061 NFATC2IPQ8NCF5 419 aa9.33□□□□□ -0.92
SMAD4-210ENST00000590061 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
SMAD4-210ENST00000590061 MRC1P22897 1456 aa9.33□□□□□ -0.92
SMAD4-210ENST00000590061 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
SMAD4-210ENST00000590061 SCN11AQ9UI33 1791 aa9.32□□□□□ -0.92
SMAD4-210ENST00000590061 STARD3NLO95772 234 aa9.32□□□□□ -0.92
SMAD4-210ENST00000590061 NPM2Q86SE8 214 aaKnown RBP9.32□□□□□ -0.92
SMAD4-210ENST00000590061 THUMPD2Q9BTF0 503 aaKnown RBP9.32□□□□□ -0.92
SMAD4-210ENST00000590061 LGR6Q9HBX8 967 aa9.32□□□□□ -0.92
SMAD4-210ENST00000590061 FAM217BQ9NTX9 383 aaPredicted RBP9.32□□□□□ -0.92
SMAD4-210ENST00000590061 HDAC5Q9UQL6 1122 aa9.32□□□□□ -0.92
SMAD4-210ENST00000590061 SLC27A5Q9Y2P5 690 aa9.32□□□□□ -0.92
SMAD4-210ENST00000590061 LRRC37A3O60309 1634 aa9.31□□□□□ -0.92
SMAD4-210ENST00000590061 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-210ENST00000590061 VAMP4O75379 141 aa9.31□□□□□ -0.92
SMAD4-210ENST00000590061 RARSP54136 660 aaKnown RBP9.31□□□□□ -0.92
SMAD4-210ENST00000590061 EIF4A1P60842 406 aaKnown RBP9.31□□□□□ -0.92
SMAD4-210ENST00000590061 SEPT12Q8IYM1 358 aa9.31□□□□□ -0.92
SMAD4-210ENST00000590061 TSR2Q969E8 191 aaKnown RBP9.31□□□□□ -0.92
SMAD4-210ENST00000590061 API5Q9BZZ5 524 aaKnown RBP9.31□□□□□ -0.92
SMAD4-210ENST00000590061 GPCPD1Q9NPB8 672 aa9.31□□□□□ -0.92
SMAD4-210ENST00000590061 SMC4Q9NTJ3 1288 aa9.31□□□□□ -0.92
SMAD4-210ENST00000590061 DBF4Q9UBU7 674 aaPredicted RBP9.31□□□□□ -0.92
SMAD4-210ENST00000590061 WNK3Q9BYP7 1800 aa9.31□□□□□ -0.92
SMAD4-210ENST00000590061 PTPRCP08575 1304 aa9.31□□□□□ -0.92
SMAD4-210ENST00000590061 RNF123Q5XPI4 1314 aa9.31□□□□□ -0.92
SMAD4-210ENST00000590061 DDX58O95786 925 aaKnown RBP9.3□□□□□ -0.92
SMAD4-210ENST00000590061 ZKSCAN2Q63HK3 967 aa9.3□□□□□ -0.92
SMAD4-210ENST00000590061 KRT27Q7Z3Y8 459 aa9.3□□□□□ -0.92
SMAD4-210ENST00000590061 SPSB2Q99619 263 aa9.3□□□□□ -0.92
SMAD4-210ENST00000590061 SLC6A16Q9GZN6 736 aa9.3□□□□□ -0.92
SMAD4-210ENST00000590061 HYPKQ9NX55 129 aa9.3□□□□□ -0.92
SMAD4-210ENST00000590061 SUPT16HQ9Y5B9 1047 aaKnown RBP9.3□□□□□ -0.92
SMAD4-210ENST00000590061 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-210ENST00000590061 GIGYF1O75420 1035 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-210ENST00000590061 CLCN1P35523 988 aa9.29□□□□□ -0.92
SMAD4-210ENST00000590061 AMHR2Q16671 573 aa9.29□□□□□ -0.92
SMAD4-210ENST00000590061 PLA2G2CQ5R387 149 aa9.29□□□□□ -0.92
SMAD4-210ENST00000590061 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
SMAD4-210ENST00000590061 BRICD5Q6PL45 260 aa9.29□□□□□ -0.92
SMAD4-210ENST00000590061 FTSJ3Q8IY81 847 aaKnown RBP9.29□□□□□ -0.92
SMAD4-210ENST00000590061 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-210ENST00000590061 MARCH10Q8NA82 808 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-210ENST00000590061 RRP1P56182 461 aaKnown RBP9.28□□□□□ -0.92
SMAD4-210ENST00000590061 C8orf58Q8NAV2 365 aa9.28□□□□□ -0.92
SMAD4-210ENST00000590061 SYTL4Q96C24 671 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-210ENST00000590061 HEG1Q9ULI3 1381 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 THSD7AQ9UPZ6 1657 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 VIRMAQ69YN4 1812 aaKnown RBP9.27□□□□□ -0.93
SMAD4-210ENST00000590061 SENP3-EIF4A1A0A087X0R7 540 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 LCE2BO14633 110 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 KDM4AO75164 1064 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 ATF7IPQ6VMQ6 1270 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 RNF19BQ6ZMZ0 732 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 SSH1Q8WYL5 1049 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 PIGBQ92521 554 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 DDX21Q9NR30 783 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMAD4-210ENST00000590061 RGS12O14924 1447 aa9.27□□□□□ -0.93
SMAD4-210ENST00000590061 SIPA1L3O60292 1781 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-210ENST00000590061 LIAT1Q6ZQX7 453 aa9.26□□□□□ -0.93
SMAD4-210ENST00000590061 TRIM67Q6ZTA4 783 aa9.26□□□□□ -0.93
SMAD4-210ENST00000590061 HLA-CQ95604 372 aa9.26□□□□□ -0.93
SMAD4-210ENST00000590061 PRDM9Q9NQV7 894 aa9.26□□□□□ -0.93
SMAD4-210ENST00000590061 MIS18AQ9NYP9 233 aa9.26□□□□□ -0.93
SMAD4-210ENST00000590061 GLI3P10071 1580 aa9.25□□□□□ -0.93
SMAD4-210ENST00000590061 KDM3BQ7LBC6 1761 aa9.25□□□□□ -0.93
SMAD4-210ENST00000590061 ELL2O00472 640 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-210ENST00000590061 HOXA2O43364 376 aa9.25□□□□□ -0.93
SMAD4-210ENST00000590061 FMNL1O95466 1100 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-210ENST00000590061 CCT4P50991 539 aaKnown RBP9.25□□□□□ -0.93
SMAD4-210ENST00000590061 MSS51Q4VC12 460 aa9.25□□□□□ -0.93
SMAD4-210ENST00000590061 SLC27A3Q5K4L6 730 aa9.25□□□□□ -0.93
SMAD4-210ENST00000590061 CCDC125Q86Z20 511 aa9.25□□□□□ -0.93
SMAD4-210ENST00000590061 DZIP1LQ8IYY4 767 aaKnown RBP9.25□□□□□ -0.93
SMAD4-210ENST00000590061 FRAT1Q92837 279 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-210ENST00000590061 ZNF496Q96IT1 587 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-210ENST00000590061 ATG3Q9NT62 314 aa9.25□□□□□ -0.93
SMAD4-210ENST00000590061 DDX19BQ9UMR2 479 aa9.25□□□□□ -0.93
SMAD4-210ENST00000590061 A0A087WZG4 1122 aa9.24□□□□□ -0.93
SMAD4-210ENST00000590061 EIF2S2P20042 333 aaKnown RBP9.24□□□□□ -0.93
SMAD4-210ENST00000590061 SLC19A1P41440 591 aa9.24□□□□□ -0.93
SMAD4-210ENST00000590061 USP46P62068 366 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms