RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 ZNF827Q17R98 1081 aa13.02□□□□□ -0.33
NEDD4L-224ENST00000588712 RTL9Q8NET4 1388 aa13.02□□□□□ -0.33
NEDD4L-224ENST00000588712 MYH3P11055 1940 aa13.02□□□□□ -0.33
NEDD4L-224ENST00000588712 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 MSH5O43196 834 aa13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 NFIXQ14938 502 aa13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 PDE4AP27815 886 aa13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 TM4SF1P30408 202 aa13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 SF3B3Q15393 1217 aaKnown RBP13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 SMIM5Q71RC9 77 aa13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 OSBPL3Q9H4L5 887 aa13.01□□□□□ -0.33
NEDD4L-224ENST00000588712 EYA2O00167 538 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 ITGA6P23229 1130 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 ERFEQ4G0M1 354 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 COL23A1Q86Y22 540 aaPredicted RBP13□□□□□ -0.33
NEDD4L-224ENST00000588712 GPATCH3Q96I76 525 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 PA2G4Q9UQ80 394 aaKnown RBP13□□□□□ -0.33
NEDD4L-224ENST00000588712 EP400Q96L91 3159 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 AOX1Q06278 1338 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
NEDD4L-224ENST00000588712 HCLS1P14317 486 aaPredicted RBP13□□□□□ -0.33
NEDD4L-224ENST00000588712 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 PLEKHM2Q8IWE5 1019 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 SYNE4Q8N205 404 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 CNBD1Q8NA66 436 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 GPR108Q9NPR9 543 aa13□□□□□ -0.33
NEDD4L-224ENST00000588712 SMARCA5O60264 1052 aaPredicted RBP12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 IFIT2P09913 472 aaKnown RBP12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 ST5P78524 1137 aa12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 BMP2KLQ5H9B9 411 aa12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 SIL1Q9H173 461 aa12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 LAMB2P55268 1798 aa12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 RIC1Q4ADV7 1423 aa12.99□□□□□ -0.33
NEDD4L-224ENST00000588712 PNPLA7Q6ZV29 1317 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 SERPINB2P05120 415 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 MX1P20591 662 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 LDHAL6AQ6ZMR3 332 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 GREM2Q9H772 168 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 STAP2Q9UGK3 403 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 AKAP2Q9Y2D5 859 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 SASH1O94885 1247 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 KLHDC4Q8TBB5 520 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 MPHOSPH8Q99549 860 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 IL1RAPL2Q9NP60 686 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 QSER1Q2KHR3 1735 aa12.98□□□□□ -0.33
NEDD4L-224ENST00000588712 ERC2O15083 957 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 PDE1AP54750 535 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 DEFB132Q7Z7B7 95 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 SLC16A10Q8TF71 515 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 MROH5Q6ZUA9 1318 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 ATG9AQ7Z3C6 839 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 C16orf71Q8IYS4 520 aaPredicted RBP12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 CNNM1Q9NRU3 951 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
NEDD4L-224ENST00000588712 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.33
NEDD4L-224ENST00000588712 POLRMTO00411 1230 aaKnown RBP12.96□□□□□ -0.33
NEDD4L-224ENST00000588712 AACSQ86V21 672 aa12.96□□□□□ -0.33
NEDD4L-224ENST00000588712 CCDC85AQ96PX6 553 aaPredicted RBP12.96□□□□□ -0.33
NEDD4L-224ENST00000588712 SALL3Q9BXA9 1300 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 TFCP2Q12800 502 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 TTC22Q5TAA0 569 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 PRR5LQ6MZQ0 368 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 ANKRD18AQ8IVF6 992 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 ECHDC1Q9NTX5 307 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 ZNF594Q96JF6 807 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 RIPOR2Q9Y4F9 1068 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
NEDD4L-224ENST00000588712 GLRX3O76003 335 aaKnown RBP12.94□□□□□ -0.34
NEDD4L-224ENST00000588712 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
NEDD4L-224ENST00000588712 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 METTL24Q5JXM2 366 aa12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 EAF2Q96CJ1 260 aaPredicted RBP12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 BRIP1Q9BX63 1249 aa12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 BSDC1Q9NW68 430 aaPredicted RBP12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 ABCC12Q96J65 1359 aa12.93□□□□□ -0.34
NEDD4L-224ENST00000588712 PDE8BO95263 885 aa12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 MMP10P09238 476 aa12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 PDE6BP35913 854 aa12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 RPS8P62241 208 aaKnown RBP12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 DDR1Q08345 913 aa12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 OTUD7AQ8TE49 926 aaPredicted RBP12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 RPGRQ92834 1020 aaKnown RBP12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 KLRG2A4D1S0 409 aaPredicted RBP12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 RBM17Q96I25 401 aaKnown RBP12.92□□□□□ -0.34
NEDD4L-224ENST00000588712 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms