RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 PPP1R12AO14974 1030 aaPredicted RBP6.8□□□□□ -1.32
LINC01538-201ENST00000588074 PAX3P23760 479 aa6.8□□□□□ -1.32
LINC01538-201ENST00000588074 EVA1CP58658 441 aa6.8□□□□□ -1.32
LINC01538-201ENST00000588074 EVX2Q03828 476 aa6.8□□□□□ -1.32
LINC01538-201ENST00000588074 RASA3Q14644 834 aa6.8□□□□□ -1.32
LINC01538-201ENST00000588074 GPRASP2Q96D09 838 aa6.8□□□□□ -1.32
LINC01538-201ENST00000588074 MAGEB6P1A0A0J9YX57 407 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 FOXO3O43524 673 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 TBCELQ5QJ74 424 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 ODR4Q5SWX8 454 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 ALG1LQ6GMV1 187 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 ZBTB33Q86T24 672 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 MYRIPQ8NFW9 859 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 TSR2Q969E8 191 aaKnown RBP6.79□□□□□ -1.32
LINC01538-201ENST00000588074 BORCS6Q96GS4 357 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 C12orf49Q9H741 205 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 PCDHB11Q9Y5F2 797 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 RSF1Q96T23 1441 aaPredicted RBP6.79□□□□□ -1.32
LINC01538-201ENST00000588074 HOXB3P14651 431 aaPredicted RBP6.79□□□□□ -1.32
LINC01538-201ENST00000588074 JUNDP17535 347 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 LIG1P18858 919 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 SCTRP47872 440 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 ATP2B3Q16720 1220 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 Q3C1V9 767 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 BRICD5Q6PL45 260 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 SH3BP5LQ7L8J4 393 aa6.79□□□□□ -1.32
LINC01538-201ENST00000588074 FAM126AQ9BYI3 521 aaPredicted RBP6.79□□□□□ -1.32
LINC01538-201ENST00000588074 M0R2N6 131 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 PDE6BP35913 854 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 HMGN5P82970 282 aaKnown RBP6.78□□□□□ -1.32
LINC01538-201ENST00000588074 TRDNQ13061 729 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 SH3TC2Q8TF17 1288 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 STIM2Q9P246 746 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 IGF1RP08069 1367 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 BAZ1AQ9NRL2 1556 aaPredicted RBP6.78□□□□□ -1.32
LINC01538-201ENST00000588074 CC2D2AQ9P2K1 1620 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 F6X3S4 739 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 MPHOSPH10O00566 681 aaKnown RBP6.78□□□□□ -1.32
LINC01538-201ENST00000588074 DHX16O60231 1041 aaKnown RBP6.78□□□□□ -1.32
LINC01538-201ENST00000588074 MLECQ14165 292 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 C11orf91Q3C1V1 193 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 GJD3Q8N144 294 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 JMYQ8N9B5 988 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 HNRNPLLQ8WVV9 542 aaKnown RBP6.78□□□□□ -1.32
LINC01538-201ENST00000588074 ZBED2Q9BTP6 218 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 OGFRQ9NZT2 677 aa6.78□□□□□ -1.32
LINC01538-201ENST00000588074 SMARCA4P51532 1647 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 CTAGE5O15320 804 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 NEFHP12036 1026 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 LRCH2Q5VUJ6 765 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 ANKS3Q6ZW76 656 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 ARMCX6Q7L4S7 300 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 PGBD3Q8N328 593 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 OSBPL7Q9BZF2 842 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 UPF2Q9HAU5 1272 aaKnown RBP6.77□□□□□ -1.33
LINC01538-201ENST00000588074 EVA1BQ9NVM1 165 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 NOL7Q9UMY1 257 aaKnown RBP6.77□□□□□ -1.33
LINC01538-201ENST00000588074 ATAD2Q6PL18 1390 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 SMARCA2P51531 1590 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 ESYT3A0FGR9 886 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 CCDC189A1A4V9 331 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 CCNYL3P0C7X3 344 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 SPTY2D1Q68D10 685 aaPredicted RBP6.77□□□□□ -1.33
LINC01538-201ENST00000588074 LILRB2Q8N423 598 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 MSL3Q8N5Y2 521 aaKnown RBP6.77□□□□□ -1.33
LINC01538-201ENST00000588074 PRDM9Q9NQV7 894 aa6.77□□□□□ -1.33
LINC01538-201ENST00000588074 A6NHS1 94 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 IPO8O15397 1037 aaKnown RBP6.76□□□□□ -1.33
LINC01538-201ENST00000588074 COQ9O75208 318 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 CDC45O75419 566 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 MYBPC2Q14324 1141 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 ZC3H12AQ5D1E8 599 aaKnown RBP6.76□□□□□ -1.33
LINC01538-201ENST00000588074 NBPF14Q5TI25 921 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 THAP11Q96EK4 314 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 DEPDC7Q96QD5 511 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 RPS6KC1Q96S38 1066 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 QTRT2Q9H974 415 aaKnown RBP6.76□□□□□ -1.33
LINC01538-201ENST00000588074 KLF4O43474 513 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 SLFN14P0C7P3 912 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 IRS1P35568 1242 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 EPHA4P54764 986 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 USP4Q13107 963 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 RASSF4Q9H2L5 321 aa6.76□□□□□ -1.33
LINC01538-201ENST00000588074 IBTKQ9P2D0 1353 aaPredicted RBP6.75□□□□□ -1.33
LINC01538-201ENST00000588074 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC01538-201ENST00000588074 SLC4A3P48751 1232 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 NASPP49321 788 aaPredicted RBP6.75□□□□□ -1.33
LINC01538-201ENST00000588074 GYS2P54840 703 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 DNM1Q05193 864 aaKnown RBP6.75□□□□□ -1.33
LINC01538-201ENST00000588074 TKFCQ3LXA3 575 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 MAP9Q49MG5 647 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 RNF20Q5VTR2 975 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 RPAINQ86UA6 219 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 GPKOWQ92917 476 aaPredicted RBP eCLIP6.75□□□□□ -1.33
LINC01538-201ENST00000588074 CSRNP1Q96S65 589 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 RSPH14Q9UHP6 348 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 PAXBP1Q9Y5B6 917 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 SCAPERQ9BY12 1400 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 WIZO95785 1651 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 EIF1AYO14602 144 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms