RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 GRIPAP1Q4V328 841 aa21.88■■□□□ 1.09
DNMT1-212ENST00000587197 CRAMP1Q96RY5 1269 aa21.88■■□□□ 1.09
DNMT1-212ENST00000587197 TMX4Q9H1E5 349 aaPredicted RBP21.88■■□□□ 1.09
DNMT1-212ENST00000587197 RRAGCQ9HB90 399 aa21.88■■□□□ 1.09
DNMT1-212ENST00000587197 FKBP4Q02790 459 aaKnown RBP eCLIP21.87■■□□□ 1.09
DNMT1-212ENST00000587197 TNRC6CQ9HCJ0 1690 aaKnown RBP21.86■■□□□ 1.09
DNMT1-212ENST00000587197 H7C1W4 665 aa21.86■■□□□ 1.09
DNMT1-212ENST00000587197 HSPA6P17066 643 aa21.86■■□□□ 1.09
DNMT1-212ENST00000587197 SLC4A10Q6U841 1118 aa21.86■■□□□ 1.09
DNMT1-212ENST00000587197 SYNE4Q8N205 404 aa21.86■■□□□ 1.09
DNMT1-212ENST00000587197 FAM89AQ96GI7 184 aa21.86■■□□□ 1.09
DNMT1-212ENST00000587197 SRCIN1Q9C0H9 1055 aa21.86■■□□□ 1.09
DNMT1-212ENST00000587197 RCAN3Q9UKA8 241 aa21.86■■□□□ 1.09
DNMT1-212ENST00000587197 CDHR2Q9BYE9 1310 aa21.85■■□□□ 1.09
DNMT1-212ENST00000587197 IRS4O14654 1257 aaPredicted RBP21.85■■□□□ 1.09
DNMT1-212ENST00000587197 VEGFAP15692 232 aaPredicted RBP21.85■■□□□ 1.09
DNMT1-212ENST00000587197 ATF7IPQ6VMQ6 1270 aa21.85■■□□□ 1.09
DNMT1-212ENST00000587197 RBM46Q8TBY0 533 aaKnown RBP21.85■■□□□ 1.09
DNMT1-212ENST00000587197 TIAM2Q8IVF5 1701 aa21.85■■□□□ 1.09
DNMT1-212ENST00000587197 DICER1Q9UPY3 1922 aaKnown RBP21.84■■□□□ 1.09
DNMT1-212ENST00000587197 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.09
DNMT1-212ENST00000587197 CCT4P50991 539 aaKnown RBP21.83■■□□□ 1.09
DNMT1-212ENST00000587197 ZKSCAN2Q63HK3 967 aa21.83■■□□□ 1.09
DNMT1-212ENST00000587197 PPEF1O14829 653 aaPredicted RBP21.82■■□□□ 1.08
DNMT1-212ENST00000587197 TRIM27P14373 513 aa21.82■■□□□ 1.08
DNMT1-212ENST00000587197 CASP7P55210 303 aa21.82■■□□□ 1.08
DNMT1-212ENST00000587197 PSMD1Q99460 953 aa21.82■■□□□ 1.08
DNMT1-212ENST00000587197 ABCC4O15439 1325 aa21.81■■□□□ 1.08
DNMT1-212ENST00000587197 GRM8O00222 908 aa21.81■■□□□ 1.08
DNMT1-212ENST00000587197 FSTL1Q12841 308 aa21.81■■□□□ 1.08
DNMT1-212ENST00000587197 SF3B3Q15393 1217 aaKnown RBP21.81■■□□□ 1.08
DNMT1-212ENST00000587197 FRAT1Q92837 279 aaPredicted RBP21.81■■□□□ 1.08
DNMT1-212ENST00000587197 PLA2G12BQ9BX93 195 aa21.81■■□□□ 1.08
DNMT1-212ENST00000587197 PDE8AO60658 829 aa21.8■■□□□ 1.08
DNMT1-212ENST00000587197 IARSP41252 1262 aaKnown RBP21.8■■□□□ 1.08
DNMT1-212ENST00000587197 INTS3Q68E01 1043 aaKnown RBP21.8■■□□□ 1.08
DNMT1-212ENST00000587197 OLFM4Q6UX06 510 aa21.8■■□□□ 1.08
DNMT1-212ENST00000587197 C3orf67Q6ZVT6 689 aa21.8■■□□□ 1.08
DNMT1-212ENST00000587197 DDX46Q7L014 1031 aaKnown RBP21.8■■□□□ 1.08
DNMT1-212ENST00000587197 UBE3BQ7Z3V4 1068 aa21.8■■□□□ 1.08
DNMT1-212ENST00000587197 ZNF277Q9NRM2 450 aaPredicted RBP21.8■■□□□ 1.08
DNMT1-212ENST00000587197 UTYO14607 1347 aa21.8■■□□□ 1.08
DNMT1-212ENST00000587197 BBOX1O75936 387 aa21.79■■□□□ 1.08
DNMT1-212ENST00000587197 RTL5Q5HYW3 569 aaPredicted RBP21.79■■□□□ 1.08
DNMT1-212ENST00000587197 SMC1BQ8NDV3 1235 aa21.79■■□□□ 1.08
DNMT1-212ENST00000587197 JDP2Q8WYK2 163 aa21.79■■□□□ 1.08
DNMT1-212ENST00000587197 C9orf78Q9NZ63 289 aaPredicted RBP21.79■■□□□ 1.08
DNMT1-212ENST00000587197 JARID2Q92833 1246 aaPredicted RBP21.78■■□□□ 1.08
DNMT1-212ENST00000587197 APLP1P51693 650 aa21.77■■□□□ 1.08
DNMT1-212ENST00000587197 ATP6V0A2Q9Y487 856 aa21.77■■□□□ 1.08
DNMT1-212ENST00000587197 DDNO94850 711 aaPredicted RBP21.76■■□□□ 1.07
DNMT1-212ENST00000587197 MS4A1P11836 297 aa21.76■■□□□ 1.07
DNMT1-212ENST00000587197 TMC4Q7Z404 712 aa21.76■■□□□ 1.07
DNMT1-212ENST00000587197 WDR90Q96KV7 1748 aa21.76■■□□□ 1.07
DNMT1-212ENST00000587197 USP44Q9H0E7 712 aa21.76■■□□□ 1.07
DNMT1-212ENST00000587197 IQCA1LA6NCM1 817 aa21.75■■□□□ 1.07
DNMT1-212ENST00000587197 CTSWP56202 376 aa21.75■■□□□ 1.07
DNMT1-212ENST00000587197 CCDC152Q4G0S7 254 aa21.75■■□□□ 1.07
DNMT1-212ENST00000587197 SP8Q8IXZ3 490 aa21.75■■□□□ 1.07
DNMT1-212ENST00000587197 DZIP1LQ8IYY4 767 aaKnown RBP21.75■■□□□ 1.07
DNMT1-212ENST00000587197 SUPT20HQ8NEM7 779 aa21.75■■□□□ 1.07
DNMT1-212ENST00000587197 GRAPQ13588 217 aa21.74■■□□□ 1.07
DNMT1-212ENST00000587197 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.74■■□□□ 1.07
DNMT1-212ENST00000587197 TTLL11Q8NHH1 800 aa21.74■■□□□ 1.07
DNMT1-212ENST00000587197 GRAPLQ8TC17 118 aaPredicted RBP21.74■■□□□ 1.07
DNMT1-212ENST00000587197 VPS33BQ9H267 617 aa21.74■■□□□ 1.07
DNMT1-212ENST00000587197 TNNQ9UQP3 1299 aa21.74■■□□□ 1.07
DNMT1-212ENST00000587197 SNED1Q8TER0 1413 aa21.73■■□□□ 1.07
DNMT1-212ENST00000587197 DDX60Q8IY21 1712 aaKnown RBP21.73■■□□□ 1.07
DNMT1-212ENST00000587197 CSF1RP07333 972 aa21.73■■□□□ 1.07
DNMT1-212ENST00000587197 NBPF7P0C2Y1 421 aaPredicted RBP21.73■■□□□ 1.07
DNMT1-212ENST00000587197 FTSJ3Q8IY81 847 aaKnown RBP21.73■■□□□ 1.07
DNMT1-212ENST00000587197 LARGE2Q8N3Y3 721 aa21.73■■□□□ 1.07
DNMT1-212ENST00000587197 CLUAP1Q96AJ1 413 aa21.73■■□□□ 1.07
DNMT1-212ENST00000587197 RTL9Q8NET4 1388 aa21.73■■□□□ 1.07
DNMT1-212ENST00000587197 LAMB2P55268 1798 aa21.72■■□□□ 1.07
DNMT1-212ENST00000587197 POTECB2RU33 542 aa21.72■■□□□ 1.07
DNMT1-212ENST00000587197 FZD9O00144 591 aa21.72■■□□□ 1.07
DNMT1-212ENST00000587197 EIF6P56537 245 aaKnown RBP21.72■■□□□ 1.07
DNMT1-212ENST00000587197 HDAC5Q9UQL6 1122 aa21.72■■□□□ 1.07
DNMT1-212ENST00000587197 DPP8Q6V1X1 898 aaPredicted RBP21.71■■□□□ 1.07
DNMT1-212ENST00000587197 MPNDQ8N594 471 aa21.71■■□□□ 1.07
DNMT1-212ENST00000587197 TMEM57Q8N5G2 664 aa21.71■■□□□ 1.07
DNMT1-212ENST00000587197 L3MBTL3Q96JM7 780 aaPredicted RBP21.71■■□□□ 1.07
DNMT1-212ENST00000587197 FOXO4P98177 505 aa21.7■■□□□ 1.06
DNMT1-212ENST00000587197 SUCLG2Q96I99 432 aa21.7■■□□□ 1.06
DNMT1-212ENST00000587197 PPIP5K2O43314 1243 aa21.69■■□□□ 1.06
DNMT1-212ENST00000587197 GNAI3P08754 354 aa21.69■■□□□ 1.06
DNMT1-212ENST00000587197 RLBP1P12271 317 aa21.69■■□□□ 1.06
DNMT1-212ENST00000587197 PDE3AQ14432 1141 aa21.69■■□□□ 1.06
DNMT1-212ENST00000587197 NIM1KQ8IY84 436 aa21.69■■□□□ 1.06
DNMT1-212ENST00000587197 GPC2Q8N158 579 aa21.69■■□□□ 1.06
DNMT1-212ENST00000587197 KAZALD1Q96I82 304 aa21.69■■□□□ 1.06
DNMT1-212ENST00000587197 RABL6Q3YEC7 729 aaPredicted RBP21.68■■□□□ 1.06
DNMT1-212ENST00000587197 EPHA10Q5JZY3 1008 aa21.68■■□□□ 1.06
DNMT1-212ENST00000587197 RTFDC1Q9BY42 306 aaPredicted RBP21.68■■□□□ 1.06
DNMT1-212ENST00000587197 ZNF541Q9H0D2 1346 aa21.68■■□□□ 1.06
DNMT1-212ENST00000587197 UBTFL1P0CB47 393 aaPredicted RBP21.67■■□□□ 1.06
DNMT1-212ENST00000587197 RPS8P62241 208 aaKnown RBP21.67■■□□□ 1.06
DNMT1-212ENST00000587197 CDC5LQ99459 802 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms