RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
SMARCA4-211ENST00000586921 PRAMEF22A3QJZ6 481 aa17.22■□□□□ 0.35
SMARCA4-211ENST00000586921 H0YGN5 161 aa17.22■□□□□ 0.35
SMARCA4-211ENST00000586921 EGFRP00533 1210 aa17.22■□□□□ 0.35
SMARCA4-211ENST00000586921 KIAA2012Q0VF49 1180 aa17.22■□□□□ 0.35
SMARCA4-211ENST00000586921 HLFQ16534 295 aa17.22■□□□□ 0.35
SMARCA4-211ENST00000586921 DPF2Q92785 391 aa17.22■□□□□ 0.35
SMARCA4-211ENST00000586921 ZBTB12Q9Y330 459 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-211ENST00000586921 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-211ENST00000586921 DPP8Q6V1X1 898 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-211ENST00000586921 CDCA5Q96FF9 252 aa17.21■□□□□ 0.35
SMARCA4-211ENST00000586921 TRIM17Q9Y577 477 aa17.21■□□□□ 0.35
SMARCA4-211ENST00000586921 YDJCA8MPS7 323 aa17.2■□□□□ 0.34
SMARCA4-211ENST00000586921 FKBP1BP68106 108 aa17.2■□□□□ 0.34
SMARCA4-211ENST00000586921 RBM26Q5T8P6 1007 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-211ENST00000586921 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
SMARCA4-211ENST00000586921 GGA3Q9NZ52 723 aa17.2■□□□□ 0.34
SMARCA4-211ENST00000586921 TM4SF4P48230 202 aa17.19■□□□□ 0.34
SMARCA4-211ENST00000586921 KCNQ3O43525 872 aa17.18■□□□□ 0.34
SMARCA4-211ENST00000586921 MORC1Q86VD1 984 aa17.18■□□□□ 0.34
SMARCA4-211ENST00000586921 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
SMARCA4-211ENST00000586921 PITPNM2Q9BZ72 1349 aa17.18■□□□□ 0.34
SMARCA4-211ENST00000586921 PSMD14O00487 310 aa17.17■□□□□ 0.34
SMARCA4-211ENST00000586921 KIF4BQ2VIQ3 1234 aa17.17■□□□□ 0.34
SMARCA4-211ENST00000586921 OTOP1Q7RTM1 612 aa17.17■□□□□ 0.34
SMARCA4-211ENST00000586921 MPNDQ8N594 471 aa17.17■□□□□ 0.34
SMARCA4-211ENST00000586921 CFHR5Q9BXR6 569 aa17.17■□□□□ 0.34
SMARCA4-211ENST00000586921 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 SREBF2Q12772 1141 aa17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 NBPF10Q6P3W6 841 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 R3HDMLQ9H3Y0 253 aa17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-211ENST00000586921 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-211ENST00000586921 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-211ENST00000586921 ARMC5Q96C12 935 aa17.15■□□□□ 0.34
SMARCA4-211ENST00000586921 POLR3GLQ9BT43 218 aa17.15■□□□□ 0.34
SMARCA4-211ENST00000586921 TMEM106CQ9BVX2 250 aa17.15■□□□□ 0.34
SMARCA4-211ENST00000586921 MKRN3Q13064 507 aaKnown RBP17.14■□□□□ 0.33
SMARCA4-211ENST00000586921 ASTN2O75129 1339 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-211ENST00000586921 GPTP24298 496 aa17.13■□□□□ 0.33
SMARCA4-211ENST00000586921 MOB2Q70IA6 237 aa17.13■□□□□ 0.33
SMARCA4-211ENST00000586921 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
SMARCA4-211ENST00000586921 PTPN22Q9Y2R2 807 aa17.13■□□□□ 0.33
SMARCA4-211ENST00000586921 ABCC4O15439 1325 aa17.13■□□□□ 0.33
SMARCA4-211ENST00000586921 UBE2Q2LH0YL09 131 aa17.12■□□□□ 0.33
SMARCA4-211ENST00000586921 UBN2Q6ZU65 1347 aa17.12■□□□□ 0.33
SMARCA4-211ENST00000586921 NUP98P52948 1817 aa17.12■□□□□ 0.33
SMARCA4-211ENST00000586921 SUSD4Q5VX71 490 aa17.11■□□□□ 0.33
SMARCA4-211ENST00000586921 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
SMARCA4-211ENST00000586921 CEMIPQ8WUJ3 1361 aa17.11■□□□□ 0.33
SMARCA4-211ENST00000586921 ERVV-1B6SEH8 477 aa17.1■□□□□ 0.33
SMARCA4-211ENST00000586921 BBOX1O75936 387 aa17.1■□□□□ 0.33
SMARCA4-211ENST00000586921 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
SMARCA4-211ENST00000586921 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-211ENST00000586921 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
SMARCA4-211ENST00000586921 DBNDD1Q9H9R9 158 aa17.1■□□□□ 0.33
SMARCA4-211ENST00000586921 DUOX1Q9NRD9 1551 aa17.1■□□□□ 0.33
SMARCA4-211ENST00000586921 NTSR2O95665 410 aa17.09■□□□□ 0.33
SMARCA4-211ENST00000586921 TTLL12Q14166 644 aaPredicted RBP17.09■□□□□ 0.33
SMARCA4-211ENST00000586921 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
SMARCA4-211ENST00000586921 LAMA3Q16787 3333 aa17.08■□□□□ 0.33
SMARCA4-211ENST00000586921 ZNF609O15014 1411 aa17.08■□□□□ 0.32
SMARCA4-211ENST00000586921 MAP3K15Q6ZN16 1313 aa17.08■□□□□ 0.32
SMARCA4-211ENST00000586921 NGEFQ8N5V2 710 aa17.08■□□□□ 0.32
SMARCA4-211ENST00000586921 ERO1AQ96HE7 468 aa17.08■□□□□ 0.32
SMARCA4-211ENST00000586921 SCARF1Q14162 830 aa17.07■□□□□ 0.32
SMARCA4-211ENST00000586921 WASHC4Q2M389 1173 aa17.07■□□□□ 0.32
SMARCA4-211ENST00000586921 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
SMARCA4-211ENST00000586921 KIF6Q6ZMV9 814 aa17.07■□□□□ 0.32
SMARCA4-211ENST00000586921 ZNF333Q96JL9 665 aa17.07■□□□□ 0.32
SMARCA4-211ENST00000586921 PANK3Q9H999 370 aa17.07■□□□□ 0.32
SMARCA4-211ENST00000586921 RTL9Q8NET4 1388 aa17.06■□□□□ 0.32
SMARCA4-211ENST00000586921 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
SMARCA4-211ENST00000586921 PPP1R42Q7Z4L9 355 aa17.06■□□□□ 0.32
SMARCA4-211ENST00000586921 ECE2O60344 883 aa17.05■□□□□ 0.32
SMARCA4-211ENST00000586921 CD99L2Q8TCZ2 262 aa17.05■□□□□ 0.32
SMARCA4-211ENST00000586921 EFCC1Q9HA90 598 aa17.05■□□□□ 0.32
SMARCA4-211ENST00000586921 KCNQ5Q9NR82 932 aa17.05■□□□□ 0.32
SMARCA4-211ENST00000586921 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-211ENST00000586921 DPF3Q92784 378 aa17.04■□□□□ 0.32
SMARCA4-211ENST00000586921 COL25A1Q9BXS0 654 aaPredicted RBP17.04■□□□□ 0.32
SMARCA4-211ENST00000586921 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
SMARCA4-211ENST00000586921 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
SMARCA4-211ENST00000586921 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-211ENST00000586921 SLC9C1Q4G0N8 1177 aa17.03■□□□□ 0.32
SMARCA4-211ENST00000586921 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-211ENST00000586921 NBPF11Q86T75 865 aa17.03■□□□□ 0.32
SMARCA4-211ENST00000586921 ZNF34Q8IZ26 560 aa17.03■□□□□ 0.32
SMARCA4-211ENST00000586921 PRO3102Q9H379 93 aa17.03■□□□□ 0.32
SMARCA4-211ENST00000586921 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-211ENST00000586921 NF2P35240 595 aa17.02■□□□□ 0.32
SMARCA4-211ENST00000586921 GRAPQ13588 217 aa17.02■□□□□ 0.32
SMARCA4-211ENST00000586921 DOK7Q18PE1 504 aa17.02■□□□□ 0.32
SMARCA4-211ENST00000586921 PARP10Q53GL7 1025 aa17.02■□□□□ 0.32
SMARCA4-211ENST00000586921 PRAMEF18Q5VWM3 479 aa17.02■□□□□ 0.32
SMARCA4-211ENST00000586921 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms