RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 FAM89AQ96GI7 184 aa21.57■■□□□ 1.04
CDK5RAP3-206ENST00000578018 LMOD1P29536 600 aaPredicted RBP21.56■■□□□ 1.04
CDK5RAP3-206ENST00000578018 TRIM28Q13263 835 aaKnown RBP21.56■■□□□ 1.04
CDK5RAP3-206ENST00000578018 MKRN1Q9UHC7 482 aaKnown RBP21.56■■□□□ 1.04
CDK5RAP3-206ENST00000578018 CNTNAP1P78357 1384 aa21.56■■□□□ 1.04
CDK5RAP3-206ENST00000578018 ELL2O00472 640 aaPredicted RBP21.55■■□□□ 1.04
CDK5RAP3-206ENST00000578018 SF3B3Q15393 1217 aaKnown RBP21.55■■□□□ 1.04
CDK5RAP3-206ENST00000578018 CCDC184Q52MB2 194 aa21.55■■□□□ 1.04
CDK5RAP3-206ENST00000578018 MAP1SQ66K74 1059 aaPredicted RBP21.55■■□□□ 1.04
CDK5RAP3-206ENST00000578018 TMC4Q7Z404 712 aa21.55■■□□□ 1.04
CDK5RAP3-206ENST00000578018 MPNDQ8N594 471 aa21.55■■□□□ 1.04
CDK5RAP3-206ENST00000578018 HSPA1AP0DMV8 641 aaKnown RBP21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 HSPA1BP0DMV9 641 aaKnown RBP21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 EPS15P42566 896 aa21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 GOLGA2Q08379 1002 aa21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 KIAA2012Q0VF49 1180 aa21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 CNTROBQ8N137 903 aa21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 C8orf58Q8NAV2 365 aa21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 PHAXQ9H814 394 aaKnown RBP21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 ZNRF3Q9ULT6 936 aa21.54■■□□□ 1.04
CDK5RAP3-206ENST00000578018 TMEM88BA6NKF7 163 aa21.53■■□□□ 1.04
CDK5RAP3-206ENST00000578018 COL13A1Q5TAT6 717 aaPredicted RBP21.53■■□□□ 1.04
CDK5RAP3-206ENST00000578018 RIC3Q7Z5B4 369 aa21.53■■□□□ 1.04
CDK5RAP3-206ENST00000578018 CXCL9Q07325 125 aa21.52■■□□□ 1.04
CDK5RAP3-206ENST00000578018 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.04
CDK5RAP3-206ENST00000578018 CELF1Q92879 486 aaKnown RBP21.52■■□□□ 1.04
CDK5RAP3-206ENST00000578018 IRS4O14654 1257 aaPredicted RBP21.51■■□□□ 1.03
CDK5RAP3-206ENST00000578018 GPRC5DQ9NZD1 345 aa21.51■■□□□ 1.03
CDK5RAP3-206ENST00000578018 USP50Q70EL3 339 aaPredicted RBP21.5■■□□□ 1.03
CDK5RAP3-206ENST00000578018 ZBTB38Q8NAP3 1195 aaPredicted RBP21.5■■□□□ 1.03
CDK5RAP3-206ENST00000578018 TRPM7Q96QT4 1865 aa21.49■■□□□ 1.03
CDK5RAP3-206ENST00000578018 TSPYL6Q8N831 410 aa21.49■■□□□ 1.03
CDK5RAP3-206ENST00000578018 MYD88Q99836 296 aa21.49■■□□□ 1.03
CDK5RAP3-206ENST00000578018 GMPSP49915 693 aaPredicted RBP21.48■■□□□ 1.03
CDK5RAP3-206ENST00000578018 CCDC27Q2M243 656 aa21.48■■□□□ 1.03
CDK5RAP3-206ENST00000578018 CCDC30Q5VVM6 783 aa21.48■■□□□ 1.03
CDK5RAP3-206ENST00000578018 CIAPIN1Q6FI81 312 aa21.48■■□□□ 1.03
CDK5RAP3-206ENST00000578018 TSR2Q969E8 191 aaKnown RBP21.48■■□□□ 1.03
CDK5RAP3-206ENST00000578018 ADARB2Q9NS39 739 aaKnown RBP21.48■■□□□ 1.03
CDK5RAP3-206ENST00000578018 CDHR2Q9BYE9 1310 aa21.48■■□□□ 1.03
CDK5RAP3-206ENST00000578018 YDJCA8MPS7 323 aa21.47■■□□□ 1.03
CDK5RAP3-206ENST00000578018 CCDC191Q8NCU4 936 aa21.47■■□□□ 1.03
CDK5RAP3-206ENST00000578018 CHMP4AQ9BY43 222 aa21.47■■□□□ 1.03
CDK5RAP3-206ENST00000578018 RAD17O75943 681 aa21.46■■□□□ 1.03
CDK5RAP3-206ENST00000578018 DDX58O95786 925 aaKnown RBP21.46■■□□□ 1.03
CDK5RAP3-206ENST00000578018 VEGFBP49765 207 aa21.46■■□□□ 1.03
CDK5RAP3-206ENST00000578018 WWC1Q8IX03 1113 aa21.46■■□□□ 1.03
CDK5RAP3-206ENST00000578018 METTL22Q9BUU2 404 aaPredicted RBP21.46■■□□□ 1.03
CDK5RAP3-206ENST00000578018 NSFL1CQ9UNZ2 370 aaKnown RBP21.46■■□□□ 1.03
CDK5RAP3-206ENST00000578018 RASSF10A6NK89 507 aa21.45■■□□□ 1.02
CDK5RAP3-206ENST00000578018 PCCAP05165 728 aaPredicted RBP21.45■■□□□ 1.02
CDK5RAP3-206ENST00000578018 GPSM2P81274 684 aa21.45■■□□□ 1.02
CDK5RAP3-206ENST00000578018 TNIP1Q15025 636 aa21.45■■□□□ 1.02
CDK5RAP3-206ENST00000578018 CWC25Q9NXE8 425 aaPredicted RBP21.45■■□□□ 1.02
CDK5RAP3-206ENST00000578018 MYH3P11055 1940 aa21.45■■□□□ 1.02
CDK5RAP3-206ENST00000578018 HSP90B1P14625 803 aaKnown RBP21.44■■□□□ 1.02
CDK5RAP3-206ENST00000578018 RPS8P62241 208 aaKnown RBP21.44■■□□□ 1.02
CDK5RAP3-206ENST00000578018 FMR1Q06787 632 aaKnown RBP eCLIP21.44■■□□□ 1.02
CDK5RAP3-206ENST00000578018 POLLQ9UGP5 575 aa21.44■■□□□ 1.02
CDK5RAP3-206ENST00000578018 WASHC4Q2M389 1173 aa21.43■■□□□ 1.02
CDK5RAP3-206ENST00000578018 BCL2L13Q9BXK5 485 aa21.43■■□□□ 1.02
CDK5RAP3-206ENST00000578018 SEC31BQ9NQW1 1179 aa21.43■■□□□ 1.02
CDK5RAP3-206ENST00000578018 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
CDK5RAP3-206ENST00000578018 THSD7BQ9C0I4 1608 aa21.43■■□□□ 1.02
CDK5RAP3-206ENST00000578018 SCN9AQ15858 1988 aa21.43■■□□□ 1.02
CDK5RAP3-206ENST00000578018 TRAF5O00463 557 aa21.42■■□□□ 1.02
CDK5RAP3-206ENST00000578018 PDE8AO60658 829 aa21.42■■□□□ 1.02
CDK5RAP3-206ENST00000578018 IL16Q14005 1332 aa21.42■■□□□ 1.02
CDK5RAP3-206ENST00000578018 KSR2Q6VAB6 950 aa21.42■■□□□ 1.02
CDK5RAP3-206ENST00000578018 DBNDD1Q9H9R9 158 aa21.42■■□□□ 1.02
CDK5RAP3-206ENST00000578018 MRS2Q9HD23 443 aa21.42■■□□□ 1.02
CDK5RAP3-206ENST00000578018 ABT1Q9ULW3 272 aaKnown RBP21.42■■□□□ 1.02
CDK5RAP3-206ENST00000578018 C6orf229H3BNL8 230 aa21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 DEFB115Q30KQ5 88 aa21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 TWISTNBQ3B726 338 aaPredicted RBP21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 CCDC152Q4G0S7 254 aa21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 NCBP3Q53F19 620 aaKnown RBP21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 TNS4Q8IZW8 715 aa21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 TBC1D16Q8TBP0 767 aa21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 JARID2Q92833 1246 aaPredicted RBP21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
CDK5RAP3-206ENST00000578018 CACNA1FO60840 1977 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 SHTN1A0MZ66 631 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 RIMBP2O15034 1052 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 IGKV5-2P06315 115 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 TRPM4Q8TD43 1214 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 GPR101Q96P66 508 aaPredicted RBP21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 EYA3Q99504 573 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
CDK5RAP3-206ENST00000578018 RTL9Q8NET4 1388 aa21.39■■□□□ 1.02
CDK5RAP3-206ENST00000578018 SPEF2Q9C093 1822 aa21.39■■□□□ 1.02
CDK5RAP3-206ENST00000578018 FOXN1O15353 648 aa21.39■■□□□ 1.01
CDK5RAP3-206ENST00000578018 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.01
CDK5RAP3-206ENST00000578018 CST9Q5W186 159 aa21.39■■□□□ 1.01
CDK5RAP3-206ENST00000578018 PGAP2Q9UHJ9 254 aa21.39■■□□□ 1.01
CDK5RAP3-206ENST00000578018 CNOT7Q9UIV1 285 aaKnown RBP21.39■■□□□ 1.01
CDK5RAP3-206ENST00000578018 PSME4Q14997 1843 aa21.39■■□□□ 1.01
CDK5RAP3-206ENST00000578018 PSMD14O00487 310 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms