RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 SIX5Q8N196 739 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 SALL2Q9Y467 1007 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-202ENST00000577598 TSPAN6O43657 245 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 MCCD1P59942 119 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-202ENST00000577598 APOBRQ0VD83 1088 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 RGL3Q3MIN7 710 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 REM2Q8IYK8 340 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-202ENST00000577598 CHPFQ8IZ52 775 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 ANKIB1Q9P2G1 1089 aa6.39□□□□□ -1.39
BRIP1-202ENST00000577598 PRPF40AO75400 957 aaKnown RBP6.38□□□□□ -1.39
BRIP1-202ENST00000577598 ABCB5Q2M3G0 1257 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 ESCO1Q5FWF5 840 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 SPECC1Q5M775 1068 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 ICE2Q659A1 982 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 PLD6Q8N2A8 252 aaKnown RBP6.38□□□□□ -1.39
BRIP1-202ENST00000577598 FGRP09769 529 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 BIRC3Q13489 604 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 C6orf132Q5T0Z8 1188 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 CPXCR1Q8N123 301 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 TLR6Q9Y2C9 796 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 TNFAIP3P21580 790 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 MASP1P48740 699 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 LLGL1Q15334 1064 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 ZNF654Q8IZM8 581 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 EPS8L3Q8TE67 593 aaKnown RBP6.38□□□□□ -1.39
BRIP1-202ENST00000577598 LGR4Q9BXB1 951 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 PDZRN3Q9UPQ7 1066 aa6.38□□□□□ -1.39
BRIP1-202ENST00000577598 KPNA6O60684 536 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 SSRP1Q08945 709 aaKnown RBP6.37□□□□□ -1.39
BRIP1-202ENST00000577598 CHAF1AQ13111 956 aaPredicted RBP6.37□□□□□ -1.39
BRIP1-202ENST00000577598 USPL1Q5W0Q7 1092 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 RSPH9Q9H1X1 276 aaPredicted RBP6.37□□□□□ -1.39
BRIP1-202ENST00000577598 POLIQ9UNA4 740 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ZNF232Q9UNY5 417 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.37□□□□□ -1.39
BRIP1-202ENST00000577598 TBX3O15119 743 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 PDE8AO60658 829 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 PGRP06401 933 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 CTSHP09668 335 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 CCND1P24385 295 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ASIC2Q16515 512 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 OCLNQ16625 522 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ARHGAP29Q52LW3 1261 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 NXPE4Q6UWF7 544 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 GK5Q6ZS86 529 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ZBTB33Q86T24 672 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 FERD3LQ96RJ6 166 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ARHGEF10LQ9HCE6 1279 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 AKAP2Q9Y2D5 859 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 RPGRIP1LQ68CZ1 1315 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 SMAD7O15105 426 aaKnown RBP6.37□□□□□ -1.39
BRIP1-202ENST00000577598 AKAP10O43572 662 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 DIAPH1O60610 1272 aaKnown RBP6.37□□□□□ -1.39
BRIP1-202ENST00000577598 KRT20P35900 424 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 PICALMQ13492 652 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 PTPN21Q16825 1174 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 WWC2Q6AWC2 1192 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ZBTB46Q86UZ6 589 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.37□□□□□ -1.39
BRIP1-202ENST00000577598 CRELD1Q96HD1 420 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 MS4A3Q96HJ5 214 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 MYCBPQ99417 103 aaPredicted RBP6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ARNT2Q9HBZ2 717 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 ZNF652Q9Y2D9 606 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 PCDHGB6Q9Y5F9 930 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 PCDHGB3Q9Y5G1 929 aa6.37□□□□□ -1.39
BRIP1-202ENST00000577598 PIP4K2BP78356 416 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 RAPGEF1Q13905 1077 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 FBF1Q8TES7 1133 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 TSPAN10Q9H1Z9 355 aaPredicted RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 GINM1Q9NU53 330 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 SWAP70Q9UH65 585 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 PCDHB11Q9Y5F2 797 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 PPP1R12BO60237 982 aaPredicted RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 HSP90AA1P07900 732 aaKnown RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 SKOR2Q2VWA4 1001 aaPredicted RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 PROX2Q3B8N5 592 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 LINC01559Q495D7 138 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 RSRC2Q7L4I2 434 aaKnown RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 KHSRPQ92945 711 aaKnown RBP eCLIP6.36□□□□□ -1.393e-7■■■■□ 21.4
BRIP1-202ENST00000577598 C9orf78Q9NZ63 289 aaPredicted RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 DMTF1Q9Y222 760 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 LUC7L2Q9Y383 392 aaKnown RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 EIF3JO75822 258 aaKnown RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 L1CAMP32004 1257 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 CCDC92Q53HC0 331 aaPredicted RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 CCDC30Q5VVM6 783 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 JARID2Q92833 1246 aaPredicted RBP6.36□□□□□ -1.39
BRIP1-202ENST00000577598 SIL1Q9H173 461 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 MAPK8IP1Q9UQF2 711 aa6.36□□□□□ -1.39
BRIP1-202ENST00000577598 A6NCN8 305 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 TREHO43280 583 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 PPFIA3O75145 1194 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 RAPGEF3O95398 923 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 CNGB1Q14028 1251 aaPredicted RBP6.35□□□□□ -1.39
BRIP1-202ENST00000577598 CCDC85BQ15834 202 aaPredicted RBP6.35□□□□□ -1.39
BRIP1-202ENST00000577598 COBLL1Q53SF7 1204 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 TMEM92Q6UXU6 159 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 RNF39Q9H2S5 420 aa6.35□□□□□ -1.39
BRIP1-202ENST00000577598 DDX41Q9UJV9 622 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms