RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TBC1D10BQ4KMP7 808 aaPredicted RBP7.87□□□□□ -1.15
SMG6-219ENST00000575663 PARP10Q53GL7 1025 aa7.87□□□□□ -1.15
SMG6-219ENST00000575663 AMER1Q5JTC6 1135 aaPredicted RBP7.87□□□□□ -1.15
SMG6-219ENST00000575663 SLC51AQ86UW1 340 aa7.87□□□□□ -1.15
SMG6-219ENST00000575663 RASAL3Q86YV0 1011 aa7.87□□□□□ -1.15
SMG6-219ENST00000575663 NGEFQ8N5V2 710 aa7.87□□□□□ -1.15
SMG6-219ENST00000575663 ZNF296Q8WUU4 475 aaPredicted RBP7.87□□□□□ -1.15
SMG6-219ENST00000575663 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
SMG6-219ENST00000575663 SHTN1A0MZ66 631 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 BBOX1O75936 387 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 NTSR2O95665 410 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 FXR1P51114 621 aaKnown RBP eCLIP7.86□□□□□ -1.15
SMG6-219ENST00000575663 KIF4BQ2VIQ3 1234 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 SUSD4Q5VX71 490 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 SAMD7Q7Z3H4 446 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 SP8Q8IXZ3 490 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 ZBTB3Q9H5J0 574 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 GGA3Q9NZ52 723 aa7.86□□□□□ -1.15
SMG6-219ENST00000575663 ZBTB12Q9Y330 459 aaPredicted RBP7.86□□□□□ -1.15
SMG6-219ENST00000575663 YDJCA8MPS7 323 aa7.85□□□□□ -1.15
SMG6-219ENST00000575663 PRKAR2BP31323 418 aa7.85□□□□□ -1.15
SMG6-219ENST00000575663 NOM1Q5C9Z4 860 aaKnown RBP7.85□□□□□ -1.15
SMG6-219ENST00000575663 INTS3Q68E01 1043 aaKnown RBP7.85□□□□□ -1.15
SMG6-219ENST00000575663 DLK2Q6UY11 383 aa7.85□□□□□ -1.15
SMG6-219ENST00000575663 DDX46Q7L014 1031 aaKnown RBP7.85□□□□□ -1.15
SMG6-219ENST00000575663 TMC4Q7Z404 712 aa7.85□□□□□ -1.15
SMG6-219ENST00000575663 CDCA5Q96FF9 252 aa7.85□□□□□ -1.15
SMG6-219ENST00000575663 COL3A1P02461 1466 aaPredicted RBP7.85□□□□□ -1.15
SMG6-219ENST00000575663 GPR25O00155 361 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 PSMD14O00487 310 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 FKTNO75072 461 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 TBC1D8O95759 1140 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 HSPA5P11021 654 aaKnown RBP7.84□□□□□ -1.15
SMG6-219ENST00000575663 MYL6BP14649 208 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 SREBF2Q12772 1141 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 GRAPQ13588 217 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 RBM26Q5T8P6 1007 aaKnown RBP7.84□□□□□ -1.15
SMG6-219ENST00000575663 GIGYF2Q6Y7W6 1299 aaKnown RBP7.84□□□□□ -1.15
SMG6-219ENST00000575663 C3orf67Q6ZVT6 689 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 MCM10Q7L590 875 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 GRAPLQ8TC17 118 aaPredicted RBP7.84□□□□□ -1.15
SMG6-219ENST00000575663 UTP14AQ9BVJ6 771 aaKnown RBP7.84□□□□□ -1.15
SMG6-219ENST00000575663 LAMB4A4D0S4 1761 aa7.84□□□□□ -1.15
SMG6-219ENST00000575663 EGFRP00533 1210 aa7.83□□□□□ -1.16
SMG6-219ENST00000575663 WASHC4Q2M389 1173 aa7.83□□□□□ -1.16
SMG6-219ENST00000575663 CC2D1BQ5T0F9 858 aaKnown RBP7.83□□□□□ -1.16
SMG6-219ENST00000575663 TTLL7Q6ZT98 887 aa7.83□□□□□ -1.16
SMG6-219ENST00000575663 ZNF34Q8IZ26 560 aa7.83□□□□□ -1.16
SMG6-219ENST00000575663 PNISRQ8TF01 805 aaKnown RBP7.83□□□□□ -1.16
SMG6-219ENST00000575663 EYA3Q99504 573 aa7.83□□□□□ -1.16
SMG6-219ENST00000575663 DBNDD1Q9H9R9 158 aa7.83□□□□□ -1.16
SMG6-219ENST00000575663 RRP7AQ9Y3A4 280 aaKnown RBP7.83□□□□□ -1.16
SMG6-219ENST00000575663 PAPPA2Q9BXP8 1791 aa7.83□□□□□ -1.16
SMG6-219ENST00000575663 ERBB4Q15303 1308 aa7.82□□□□□ -1.16
SMG6-219ENST00000575663 HTATSF1O43719 755 aaKnown RBP7.82□□□□□ -1.16
SMG6-219ENST00000575663 NF2P35240 595 aa7.82□□□□□ -1.16
SMG6-219ENST00000575663 TAF7Q15545 349 aaPredicted RBP7.82□□□□□ -1.16
SMG6-219ENST00000575663 SLC10A5Q5PT55 438 aa7.82□□□□□ -1.16
SMG6-219ENST00000575663 ANGEL2Q5VTE6 544 aaKnown RBP7.82□□□□□ -1.16
SMG6-219ENST00000575663 PHACTR3Q96KR7 559 aa7.82□□□□□ -1.16
SMG6-219ENST00000575663 CFAP53Q96M91 514 aa7.82□□□□□ -1.16
SMG6-219ENST00000575663 RSPH6AQ9H0K4 717 aa7.82□□□□□ -1.16
SMG6-219ENST00000575663 NUDCQ9Y266 331 aa7.82□□□□□ -1.16
SMG6-219ENST00000575663 PITPNM2Q9BZ72 1349 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 DUOX1Q9NRD9 1551 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 G3V3G9 751 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 ECE2O60344 883 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 ALDH1A1P00352 501 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 TTLL12Q14166 644 aaPredicted RBP7.81□□□□□ -1.16
SMG6-219ENST00000575663 HSP90AB3PQ58FF7 597 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 DCAF8Q5TAQ9 597 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 CFHR5Q9BXR6 569 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 TRIM17Q9Y577 477 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 MKI67P46013 3256 aaKnown RBP7.81□□□□□ -1.16
SMG6-219ENST00000575663 AKAP11Q9UKA4 1901 aa7.81□□□□□ -1.16
SMG6-219ENST00000575663 POTEFA5A3E0 1075 aa7.8□□□□□ -1.16
SMG6-219ENST00000575663 C6orf229H3BNL8 230 aa7.8□□□□□ -1.16
SMG6-219ENST00000575663 NEFMP07197 916 aa7.8□□□□□ -1.16
SMG6-219ENST00000575663 TM4SF4P48230 202 aa7.8□□□□□ -1.16
SMG6-219ENST00000575663 TCIRG1Q13488 830 aa7.8□□□□□ -1.16
SMG6-219ENST00000575663 DCTN1Q14203 1278 aa7.8□□□□□ -1.16
SMG6-219ENST00000575663 NSFL1CQ9UNZ2 370 aaKnown RBP7.8□□□□□ -1.16
SMG6-219ENST00000575663 RTL9Q8NET4 1388 aa7.8□□□□□ -1.16
SMG6-219ENST00000575663 SH3TC1Q8TE82 1336 aa7.79□□□□□ -1.16
SMG6-219ENST00000575663 ZNF609O15014 1411 aa7.79□□□□□ -1.16
SMG6-219ENST00000575663 DLL1O00548 723 aa7.79□□□□□ -1.16
SMG6-219ENST00000575663 RIMBP2O15034 1052 aa7.79□□□□□ -1.16
SMG6-219ENST00000575663 VIL1P09327 827 aaKnown RBP7.79□□□□□ -1.16
SMG6-219ENST00000575663 HCLS1P14317 486 aaPredicted RBP7.79□□□□□ -1.16
SMG6-219ENST00000575663 SCARF1Q14162 830 aa7.79□□□□□ -1.16
SMG6-219ENST00000575663 OTOP1Q7RTM1 612 aa7.79□□□□□ -1.16
SMG6-219ENST00000575663 AGBL3Q8NEM8 1001 aa7.79□□□□□ -1.16
SMG6-219ENST00000575663 NECTIN2Q92692 538 aa7.79□□□□□ -1.16
SMG6-219ENST00000575663 TRMT112Q9UI30 125 aaKnown RBP7.79□□□□□ -1.16
SMG6-219ENST00000575663 COLQQ9Y215 455 aaPredicted RBP7.79□□□□□ -1.16
SMG6-219ENST00000575663 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
SMG6-219ENST00000575663 DDX60Q8IY21 1712 aaKnown RBP7.78□□□□□ -1.16
SMG6-219ENST00000575663 UBE2Q2LH0YL09 131 aa7.78□□□□□ -1.16
SMG6-219ENST00000575663 U2AF1L5P0DN76 240 aaPredicted RBP7.78□□□□□ -1.16
SMG6-219ENST00000575663 ZNF280AP59817 542 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms