RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
RPA1-206ENST00000573994 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
RPA1-206ENST00000573994 ZNF277Q9NRM2 450 aaPredicted RBP12.93□□□□□ -0.34
RPA1-206ENST00000573994 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
RPA1-206ENST00000573994 SBF1O95248 1867 aa12.93□□□□□ -0.34
RPA1-206ENST00000573994 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
RPA1-206ENST00000573994 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
RPA1-206ENST00000573994 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
RPA1-206ENST00000573994 TCIRG1Q13488 830 aa12.92□□□□□ -0.34
RPA1-206ENST00000573994 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
RPA1-206ENST00000573994 TSPYL6Q8N831 410 aa12.92□□□□□ -0.34
RPA1-206ENST00000573994 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
RPA1-206ENST00000573994 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 CHRM1P11229 460 aaPredicted RBP12.91□□□□□ -0.34
RPA1-206ENST00000573994 ALDH1B1P30837 517 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 FKBP4Q02790 459 aaKnown RBP eCLIP12.91□□□□□ -0.34
RPA1-206ENST00000573994 WWC1Q8IX03 1113 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 C16orf71Q8IYS4 520 aaPredicted RBP12.91□□□□□ -0.34
RPA1-206ENST00000573994 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 RBM17Q96I25 401 aaKnown RBP12.91□□□□□ -0.34
RPA1-206ENST00000573994 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 PHAXQ9H814 394 aaKnown RBP12.91□□□□□ -0.34
RPA1-206ENST00000573994 HYPKQ9NX55 129 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 TRMT112Q9UI30 125 aaKnown RBP12.91□□□□□ -0.34
RPA1-206ENST00000573994 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
RPA1-206ENST00000573994 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
RPA1-206ENST00000573994 PPEF1O14829 653 aaPredicted RBP12.9□□□□□ -0.34
RPA1-206ENST00000573994 TOMM70O94826 608 aa12.9□□□□□ -0.34
RPA1-206ENST00000573994 HSPA6P17066 643 aa12.9□□□□□ -0.34
RPA1-206ENST00000573994 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
RPA1-206ENST00000573994 GOLGA2Q08379 1002 aa12.9□□□□□ -0.34
RPA1-206ENST00000573994 CCDC27Q2M243 656 aa12.9□□□□□ -0.34
RPA1-206ENST00000573994 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
RPA1-206ENST00000573994 FAM9BQ8IZU0 186 aa12.9□□□□□ -0.34
RPA1-206ENST00000573994 NLRP3Q96P20 1036 aa12.9□□□□□ -0.34
RPA1-206ENST00000573994 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
RPA1-206ENST00000573994 ABCC4O15439 1325 aa12.89□□□□□ -0.35
RPA1-206ENST00000573994 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
RPA1-206ENST00000573994 SH3TC1Q8TE82 1336 aa12.89□□□□□ -0.35
RPA1-206ENST00000573994 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
RPA1-206ENST00000573994 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
RPA1-206ENST00000573994 ISCA1Q9BUE6 129 aa12.89□□□□□ -0.35
RPA1-206ENST00000573994 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
RPA1-206ENST00000573994 SLC10A5Q5PT55 438 aa12.88□□□□□ -0.35
RPA1-206ENST00000573994 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
RPA1-206ENST00000573994 RBM46Q8TBY0 533 aaKnown RBP12.88□□□□□ -0.35
RPA1-206ENST00000573994 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
RPA1-206ENST00000573994 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
RPA1-206ENST00000573994 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
RPA1-206ENST00000573994 DDNO94850 711 aaPredicted RBP12.87□□□□□ -0.35
RPA1-206ENST00000573994 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
RPA1-206ENST00000573994 CCDC30Q5VVM6 783 aa12.87□□□□□ -0.35
RPA1-206ENST00000573994 MYD88Q99836 296 aa12.87□□□□□ -0.35
RPA1-206ENST00000573994 IL16Q14005 1332 aa12.87□□□□□ -0.35
RPA1-206ENST00000573994 VEGFAP15692 232 aaPredicted RBP12.86□□□□□ -0.35
RPA1-206ENST00000573994 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
RPA1-206ENST00000573994 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
RPA1-206ENST00000573994 PCDHB8Q9UN66 801 aa12.86□□□□□ -0.35
RPA1-206ENST00000573994 COL4A5P29400 1685 aa12.86□□□□□ -0.35
RPA1-206ENST00000573994 POTECB2RU33 542 aa12.85□□□□□ -0.35
RPA1-206ENST00000573994 PLCG2P16885 1265 aa12.85□□□□□ -0.35
RPA1-206ENST00000573994 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
RPA1-206ENST00000573994 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
RPA1-206ENST00000573994 PSMD1Q99460 953 aa12.85□□□□□ -0.35
RPA1-206ENST00000573994 STK31Q9BXU1 1019 aa12.85□□□□□ -0.35
RPA1-206ENST00000573994 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
RPA1-206ENST00000573994 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
RPA1-206ENST00000573994 LAMB2P55268 1798 aa12.84□□□□□ -0.35
RPA1-206ENST00000573994 HTRA3P83110 453 aa12.84□□□□□ -0.35
RPA1-206ENST00000573994 GRAPQ13588 217 aa12.84□□□□□ -0.35
RPA1-206ENST00000573994 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
RPA1-206ENST00000573994 GRAPLQ8TC17 118 aaPredicted RBP12.84□□□□□ -0.35
RPA1-206ENST00000573994 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
RPA1-206ENST00000573994 MAP3K2Q9Y2U5 619 aa12.84□□□□□ -0.35
RPA1-206ENST00000573994 ATP6V0A2Q9Y487 856 aa12.84□□□□□ -0.35
RPA1-206ENST00000573994 COL4A1P02462 1669 aa12.83□□□□□ -0.35
RPA1-206ENST00000573994 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
RPA1-206ENST00000573994 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
RPA1-206ENST00000573994 DDX58O95786 925 aaKnown RBP12.83□□□□□ -0.36
RPA1-206ENST00000573994 FSTL1Q12841 308 aa12.83□□□□□ -0.36
RPA1-206ENST00000573994 G2E3Q7L622 706 aa12.83□□□□□ -0.36
RPA1-206ENST00000573994 LARGE2Q8N3Y3 721 aa12.83□□□□□ -0.36
RPA1-206ENST00000573994 SMC1BQ8NDV3 1235 aa12.83□□□□□ -0.36
RPA1-206ENST00000573994 TMX4Q9H1E5 349 aaPredicted RBP12.83□□□□□ -0.36
RPA1-206ENST00000573994 DICER1Q9UPY3 1922 aaKnown RBP12.83□□□□□ -0.36
RPA1-206ENST00000573994 PI4KAP2A4QPH2 592 aa12.82□□□□□ -0.36
RPA1-206ENST00000573994 PPIP5K2O43314 1243 aa12.82□□□□□ -0.36
RPA1-206ENST00000573994 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
RPA1-206ENST00000573994 APLP1P51693 650 aa12.82□□□□□ -0.36
RPA1-206ENST00000573994 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
RPA1-206ENST00000573994 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
RPA1-206ENST00000573994 AOC3Q16853 763 aa12.82□□□□□ -0.36
RPA1-206ENST00000573994 DPP8Q6V1X1 898 aaPredicted RBP12.82□□□□□ -0.36
RPA1-206ENST00000573994 WDR63Q8IWG1 891 aa12.82□□□□□ -0.36
RPA1-206ENST00000573994 PI4KAP1Q8N8J0 262 aa12.82□□□□□ -0.36
RPA1-206ENST00000573994 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
RPA1-206ENST00000573994 CELF1Q92879 486 aaKnown RBP12.82□□□□□ -0.36
RPA1-206ENST00000573994 METTL22Q9BUU2 404 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms