RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 DPYDQ12882 1025 aa8.23□□□□□ -1.09
TNRC6A-218ENST00000569634 FOXD4L6Q3SYB3 417 aaPredicted RBP8.23□□□□□ -1.09
TNRC6A-218ENST00000569634 SHISA2Q6UWI4 295 aa8.23□□□□□ -1.09
TNRC6A-218ENST00000569634 FOXD4L3Q6VB84 417 aaPredicted RBP8.23□□□□□ -1.09
TNRC6A-218ENST00000569634 CALR3Q96L12 384 aaKnown RBP8.23□□□□□ -1.09
TNRC6A-218ENST00000569634 RNF112Q9ULX5 631 aa8.23□□□□□ -1.09
TNRC6A-218ENST00000569634 MICAL2O94851 1124 aa8.22□□□□□ -1.09
TNRC6A-218ENST00000569634 EGFRP00533 1210 aa8.22□□□□□ -1.09
TNRC6A-218ENST00000569634 MYO19Q96H55 970 aa8.22□□□□□ -1.09
TNRC6A-218ENST00000569634 LPIN3Q9BQK8 851 aa8.22□□□□□ -1.09
TNRC6A-218ENST00000569634 PPP1R12CQ9BZL4 782 aa8.22□□□□□ -1.09
TNRC6A-218ENST00000569634 MUC3BQ9H195 1237 aa8.22□□□□□ -1.09
TNRC6A-218ENST00000569634 NAGPAQ9UK23 515 aa8.22□□□□□ -1.09
TNRC6A-218ENST00000569634 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L12C9JPN9 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L11C9JVI0 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L21D6R901 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L18D6R9N7 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L22D6RA61 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L17D6RBQ6 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L19D6RCP7 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L20D6RJB6 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 HYAL3O43820 417 aaPredicted RBP8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 PSAPP07602 524 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 PLAURQ03405 335 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 USP17L24Q0WX57 530 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 DGKZQ13574 1117 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 PERM1Q5SV97 790 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 TMEM130Q8N3G9 435 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 TLR7Q9NYK1 1049 aaKnown RBP8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 BCS1LQ9Y276 419 aa8.2□□□□□ -1.1
TNRC6A-218ENST00000569634 GSC2O15499 205 aa8.19□□□□□ -1.1
TNRC6A-218ENST00000569634 GHRHP01286 108 aa8.19□□□□□ -1.1
TNRC6A-218ENST00000569634 WEE1P30291 646 aa8.19□□□□□ -1.1
TNRC6A-218ENST00000569634 IREB2P48200 963 aaKnown RBP8.19□□□□□ -1.1
TNRC6A-218ENST00000569634 KANK4Q5T7N3 995 aaPredicted RBP8.19□□□□□ -1.1
TNRC6A-218ENST00000569634 FNBP4Q8N3X1 1017 aaPredicted RBP8.19□□□□□ -1.1
TNRC6A-218ENST00000569634 FAM13BQ9NYF5 915 aa8.19□□□□□ -1.1
TNRC6A-218ENST00000569634 TARSP26639 723 aaKnown RBP8.18□□□□□ -1.1
TNRC6A-218ENST00000569634 SOX18P35713 384 aa8.18□□□□□ -1.1
TNRC6A-218ENST00000569634 GRIK5Q16478 980 aa8.18□□□□□ -1.1
TNRC6A-218ENST00000569634 CRTC2Q53ET0 693 aaPredicted RBP8.18□□□□□ -1.1
TNRC6A-218ENST00000569634 IFT43Q96FT9 208 aa8.18□□□□□ -1.1
TNRC6A-218ENST00000569634 SMG9Q9H0W8 520 aaKnown RBP8.18□□□□□ -1.1
TNRC6A-218ENST00000569634 AKTIPQ9H8T0 292 aa8.18□□□□□ -1.1
TNRC6A-218ENST00000569634 KLK14Q9P0G3 267 aa8.18□□□□□ -1.1
TNRC6A-218ENST00000569634 SASH3O75995 380 aa8.17□□□□□ -1.1
TNRC6A-218ENST00000569634 EIF2AK2P19525 551 aaKnown RBP8.17□□□□□ -1.1
TNRC6A-218ENST00000569634 PRR23CQ6ZRP0 262 aa8.17□□□□□ -1.1
TNRC6A-218ENST00000569634 KRT25Q7Z3Z0 450 aa8.17□□□□□ -1.1
TNRC6A-218ENST00000569634 FAM200AQ8TCP9 573 aa8.17□□□□□ -1.1
TNRC6A-218ENST00000569634 LOC102724428A0A0B4J2F2 783 aa8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 A6NJR5 290 aa8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 ZBTB42B2RXF5 422 aa8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 XYLBO75191 536 aa8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 NOS3P29474 1203 aa8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 LMOD1P29536 600 aaPredicted RBP8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 SIK1P57059 783 aa8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 ZFATQ9P243 1243 aa8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 RTCBQ9Y3I0 505 aaKnown RBP8.16□□□□□ -1.1
TNRC6A-218ENST00000569634 DLL1O00548 723 aa8.15□□□□□ -1.1
TNRC6A-218ENST00000569634 HOXD8P13378 290 aaPredicted RBP8.15□□□□□ -1.1
TNRC6A-218ENST00000569634 QTRT2Q9H974 415 aaKnown RBP8.15□□□□□ -1.1
TNRC6A-218ENST00000569634 DZIP1LQ8IYY4 767 aaKnown RBP8.14□□□□□ -1.11
TNRC6A-218ENST00000569634 PLD4Q96BZ4 506 aa8.14□□□□□ -1.11
TNRC6A-218ENST00000569634 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
TNRC6A-218ENST00000569634 SWI5Q1ZZU3 235 aa8.13□□□□□ -1.11
TNRC6A-218ENST00000569634 CMTR1Q8N1G2 835 aaKnown RBP8.13□□□□□ -1.11
TNRC6A-218ENST00000569634 FNDC3AQ9Y2H6 1198 aaKnown RBP8.13□□□□□ -1.11
TNRC6A-218ENST00000569634 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
TNRC6A-218ENST00000569634 MLLT1Q03111 559 aaPredicted RBP8.12□□□□□ -1.11
TNRC6A-218ENST00000569634 TREML1Q86YW5 311 aa8.12□□□□□ -1.11
TNRC6A-218ENST00000569634 IL22RA1Q8N6P7 574 aa8.12□□□□□ -1.11
TNRC6A-218ENST00000569634 CLUAP1Q96AJ1 413 aa8.12□□□□□ -1.11
TNRC6A-218ENST00000569634 SPACA7Q96KW9 195 aa8.12□□□□□ -1.11
TNRC6A-218ENST00000569634 PCMTD2Q9NV79 361 aa8.12□□□□□ -1.11
TNRC6A-218ENST00000569634 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 OPLAHO14841 1288 aa8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 RFX1P22670 979 aa8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 GRNP28799 593 aaKnown RBP8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 NLRP13Q86W25 1043 aa8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 RGL4Q8IZJ4 473 aa8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 COL26A1Q96A83 441 aa8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 ARXQ96QS3 562 aa8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 CEP41Q9BYV8 373 aa8.11□□□□□ -1.11
TNRC6A-218ENST00000569634 DEAF1O75398 565 aaPredicted RBP8.1□□□□□ -1.11
TNRC6A-218ENST00000569634 FSTP19883 344 aa8.1□□□□□ -1.11
TNRC6A-218ENST00000569634 TMEM132AQ24JP5 1023 aa8.1□□□□□ -1.11
TNRC6A-218ENST00000569634 HFE2Q6ZVN8 426 aa8.1□□□□□ -1.11
TNRC6A-218ENST00000569634 PIK3R5Q8WYR1 880 aa8.1□□□□□ -1.11
TNRC6A-218ENST00000569634 MEGF10Q96KG7 1140 aa8.1□□□□□ -1.11
TNRC6A-218ENST00000569634 PPME1Q9Y570 386 aa8.1□□□□□ -1.11
TNRC6A-218ENST00000569634 F8W735 103 aaPredicted RBP8.09□□□□□ -1.11
TNRC6A-218ENST00000569634 PAX4O43316 350 aa8.09□□□□□ -1.11
TNRC6A-218ENST00000569634 UVSSAQ2YD98 709 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms