RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 NGEFQ8N5V2 710 aa11.54□□□□□ -0.56
SMG1-216ENST00000569122 TRPM4Q8TD43 1214 aa11.54□□□□□ -0.56
SMG1-216ENST00000569122 SLC10A3P09131 477 aa11.53□□□□□ -0.56
SMG1-216ENST00000569122 GPTP24298 496 aa11.53□□□□□ -0.56
SMG1-216ENST00000569122 DDX46Q7L014 1031 aaKnown RBP11.53□□□□□ -0.56
SMG1-216ENST00000569122 SULF1Q8IWU6 871 aa11.53□□□□□ -0.56
SMG1-216ENST00000569122 ZNF34Q8IZ26 560 aa11.53□□□□□ -0.56
SMG1-216ENST00000569122 PHACTR3Q96KR7 559 aa11.53□□□□□ -0.56
SMG1-216ENST00000569122 CSRNP1Q96S65 589 aa11.53□□□□□ -0.56
SMG1-216ENST00000569122 UTP14AQ9BVJ6 771 aaKnown RBP11.53□□□□□ -0.56
SMG1-216ENST00000569122 COL4A5P29400 1685 aa11.52□□□□□ -0.56
SMG1-216ENST00000569122 NTSR2O95665 410 aa11.52□□□□□ -0.57
SMG1-216ENST00000569122 FKBP1BP68106 108 aa11.52□□□□□ -0.57
SMG1-216ENST00000569122 CC2D1BQ5T0F9 858 aaKnown RBP11.52□□□□□ -0.57
SMG1-216ENST00000569122 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
SMG1-216ENST00000569122 MCM10Q7L590 875 aa11.52□□□□□ -0.57
SMG1-216ENST00000569122 RRP7AQ9Y3A4 280 aaKnown RBP11.52□□□□□ -0.57
SMG1-216ENST00000569122 TRPM7Q96QT4 1865 aa11.52□□□□□ -0.57
SMG1-216ENST00000569122 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.57
SMG1-216ENST00000569122 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
SMG1-216ENST00000569122 NEFMP07197 916 aa11.51□□□□□ -0.57
SMG1-216ENST00000569122 NOM1Q5C9Z4 860 aaKnown RBP11.51□□□□□ -0.57
SMG1-216ENST00000569122 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
SMG1-216ENST00000569122 ABCC4O15439 1325 aa11.51□□□□□ -0.57
SMG1-216ENST00000569122 UBN2Q6ZU65 1347 aa11.51□□□□□ -0.57
SMG1-216ENST00000569122 PER1O15534 1290 aaPredicted RBP11.5□□□□□ -0.57
SMG1-216ENST00000569122 GRAPQ13588 217 aa11.5□□□□□ -0.57
SMG1-216ENST00000569122 WASHC4Q2M389 1173 aa11.5□□□□□ -0.57
SMG1-216ENST00000569122 HSP90AB3PQ58FF7 597 aa11.5□□□□□ -0.57
SMG1-216ENST00000569122 HABP4Q5JVS0 413 aaKnown RBP11.5□□□□□ -0.57
SMG1-216ENST00000569122 FBXO46Q6PJ61 603 aaPredicted RBP11.5□□□□□ -0.57
SMG1-216ENST00000569122 SAMD7Q7Z3H4 446 aa11.5□□□□□ -0.57
SMG1-216ENST00000569122 GRAPLQ8TC17 118 aaPredicted RBP11.5□□□□□ -0.57
SMG1-216ENST00000569122 ZBTB3Q9H5J0 574 aa11.5□□□□□ -0.57
SMG1-216ENST00000569122 ERBB4Q15303 1308 aa11.5□□□□□ -0.57
SMG1-216ENST00000569122 CACNA1SQ13698 1873 aa11.5□□□□□ -0.57
SMG1-216ENST00000569122 MYL6BP14649 208 aa11.49□□□□□ -0.57
SMG1-216ENST00000569122 TBC1D10BQ4KMP7 808 aaPredicted RBP11.49□□□□□ -0.57
SMG1-216ENST00000569122 INTS3Q68E01 1043 aaKnown RBP11.49□□□□□ -0.57
SMG1-216ENST00000569122 TTLL7Q6ZT98 887 aa11.49□□□□□ -0.57
SMG1-216ENST00000569122 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
SMG1-216ENST00000569122 EYA3Q99504 573 aa11.49□□□□□ -0.57
SMG1-216ENST00000569122 YDJCA8MPS7 323 aa11.48□□□□□ -0.57
SMG1-216ENST00000569122 PSMD14O00487 310 aa11.48□□□□□ -0.57
SMG1-216ENST00000569122 U2AF1L5P0DN76 240 aaPredicted RBP11.48□□□□□ -0.57
SMG1-216ENST00000569122 U2AF1Q01081 240 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMG1-216ENST00000569122 RBM26Q5T8P6 1007 aaKnown RBP11.48□□□□□ -0.57
SMG1-216ENST00000569122 ZNF296Q8WUU4 475 aaPredicted RBP11.48□□□□□ -0.57
SMG1-216ENST00000569122 ZBTB12Q9Y330 459 aaPredicted RBP11.48□□□□□ -0.57
SMG1-216ENST00000569122 ADM5C9JUS6 153 aa11.47□□□□□ -0.57
SMG1-216ENST00000569122 KIF4BQ2VIQ3 1234 aa11.47□□□□□ -0.57
SMG1-216ENST00000569122 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
SMG1-216ENST00000569122 RASAL3Q86YV0 1011 aa11.47□□□□□ -0.57
SMG1-216ENST00000569122 G3V3G9 751 aa11.46□□□□□ -0.57
SMG1-216ENST00000569122 SREBF2Q12772 1141 aa11.46□□□□□ -0.57
SMG1-216ENST00000569122 DCTN1Q14203 1278 aa11.46□□□□□ -0.57
SMG1-216ENST00000569122 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
SMG1-216ENST00000569122 CDCA5Q96FF9 252 aa11.46□□□□□ -0.57
SMG1-216ENST00000569122 GGA3Q9NZ52 723 aa11.46□□□□□ -0.57
SMG1-216ENST00000569122 SHTN1A0MZ66 631 aa11.45□□□□□ -0.58
SMG1-216ENST00000569122 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
SMG1-216ENST00000569122 GPR25O00155 361 aa11.45□□□□□ -0.58
SMG1-216ENST00000569122 TM4SF4P48230 202 aa11.45□□□□□ -0.58
SMG1-216ENST00000569122 EIF4A1P60842 406 aaKnown RBP11.45□□□□□ -0.58
SMG1-216ENST00000569122 ZC3H12CQ9C0D7 883 aaKnown RBP11.45□□□□□ -0.58
SMG1-216ENST00000569122 MIS18AQ9NYP9 233 aa11.45□□□□□ -0.58
SMG1-216ENST00000569122 TRMT112Q9UI30 125 aaKnown RBP11.45□□□□□ -0.58
SMG1-216ENST00000569122 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
SMG1-216ENST00000569122 COL3A1P02461 1466 aaPredicted RBP11.44□□□□□ -0.58
SMG1-216ENST00000569122 SIPA1L3O60292 1781 aaPredicted RBP11.44□□□□□ -0.58
SMG1-216ENST00000569122 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
SMG1-216ENST00000569122 FKTNO75072 461 aa11.44□□□□□ -0.58
SMG1-216ENST00000569122 TBC1D8O95759 1140 aa11.44□□□□□ -0.58
SMG1-216ENST00000569122 ALDH1A1P00352 501 aa11.44□□□□□ -0.58
SMG1-216ENST00000569122 VIL1P09327 827 aaKnown RBP11.44□□□□□ -0.58
SMG1-216ENST00000569122 NF2P35240 595 aa11.44□□□□□ -0.58
SMG1-216ENST00000569122 DLK2Q6UY11 383 aa11.44□□□□□ -0.58
SMG1-216ENST00000569122 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
SMG1-216ENST00000569122 DBNDD1Q9H9R9 158 aa11.44□□□□□ -0.58
SMG1-216ENST00000569122 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
SMG1-216ENST00000569122 ECE2O60344 883 aa11.43□□□□□ -0.58
SMG1-216ENST00000569122 HCLS1P14317 486 aaPredicted RBP11.43□□□□□ -0.58
SMG1-216ENST00000569122 SLC51AQ86UW1 340 aa11.43□□□□□ -0.58
SMG1-216ENST00000569122 AGBL3Q8NEM8 1001 aa11.43□□□□□ -0.58
SMG1-216ENST00000569122 RIMBP2O15034 1052 aa11.42□□□□□ -0.58
SMG1-216ENST00000569122 EGFRP00533 1210 aa11.42□□□□□ -0.58
SMG1-216ENST00000569122 HSP90B1P14625 803 aaKnown RBP11.42□□□□□ -0.58
SMG1-216ENST00000569122 INHBEP58166 350 aa11.42□□□□□ -0.58
SMG1-216ENST00000569122 ZNF280AP59817 542 aaPredicted RBP11.42□□□□□ -0.58
SMG1-216ENST00000569122 TRIM26Q12899 539 aaPredicted RBP11.42□□□□□ -0.58
SMG1-216ENST00000569122 TCIRG1Q13488 830 aa11.42□□□□□ -0.58
SMG1-216ENST00000569122 SCARF1Q14162 830 aa11.42□□□□□ -0.58
SMG1-216ENST00000569122 ANGEL2Q5VTE6 544 aaKnown RBP11.42□□□□□ -0.58
SMG1-216ENST00000569122 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
SMG1-216ENST00000569122 PNNQ9H307 717 aaKnown RBP11.42□□□□□ -0.58
SMG1-216ENST00000569122 MMP14P50281 582 aa11.41□□□□□ -0.58
SMG1-216ENST00000569122 CNGB1Q14028 1251 aaPredicted RBP11.41□□□□□ -0.58
SMG1-216ENST00000569122 TTLL12Q14166 644 aaPredicted RBP11.41□□□□□ -0.58
SMG1-216ENST00000569122 SF3B3Q15393 1217 aaKnown RBP11.4□□□□□ -0.58
SMG1-216ENST00000569122 DOK7Q18PE1 504 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 213.2 ms