RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, human

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNRC6A-215	ENST00000568903	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.89	□□□□□ -0.35
TNRC6A-215	ENST00000568903	RTKN2	Q8IZC4	609 aa		12.89	□□□□□ -0.35
TNRC6A-215	ENST00000568903	NYX	Q9GZU5	481 aa		12.89	□□□□□ -0.35
TNRC6A-215	ENST00000568903	C19orf67	A6NJJ6	358 aa		12.88	□□□□□ -0.35
TNRC6A-215	ENST00000568903	ITGBL1	O95965	494 aa	Predicted RBP	12.88	□□□□□ -0.35
TNRC6A-215	ENST00000568903	FMR1	Q06787	632 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
TNRC6A-215	ENST00000568903	AIMP1	Q12904	312 aa	Known RBP	12.88	□□□□□ -0.35
TNRC6A-215	ENST00000568903	RPGR	Q92834	1020 aa	Known RBP	12.88	□□□□□ -0.35
TNRC6A-215	ENST00000568903	PASK	Q96RG2	1323 aa		12.88	□□□□□ -0.35
TNRC6A-215	ENST00000568903	EPHX2	P34913	555 aa		12.87	□□□□□ -0.35
TNRC6A-215	ENST00000568903	MAP1S	Q66K74	1059 aa	Predicted RBP	12.87	□□□□□ -0.35
TNRC6A-215	ENST00000568903	COPS6	Q7L5N1	327 aa		12.87	□□□□□ -0.35
TNRC6A-215	ENST00000568903	LDHD	Q86WU2	507 aa		12.87	□□□□□ -0.35
TNRC6A-215	ENST00000568903	XAGE3	Q8WTP9	111 aa		12.87	□□□□□ -0.35
TNRC6A-215	ENST00000568903	TRIM35	Q9UPQ4	493 aa		12.87	□□□□□ -0.35
TNRC6A-215	ENST00000568903	LAS1L	Q9Y4W2	734 aa	Known RBP	12.87	□□□□□ -0.35
TNRC6A-215	ENST00000568903	GJA3	Q9Y6H8	435 aa		12.87	□□□□□ -0.35
TNRC6A-215	ENST00000568903	IQCA1L	A6NCM1	817 aa		12.86	□□□□□ -0.35
TNRC6A-215	ENST00000568903	PPEF1	O14829	653 aa	Predicted RBP	12.86	□□□□□ -0.35
TNRC6A-215	ENST00000568903	HCLS1	P14317	486 aa	Predicted RBP	12.86	□□□□□ -0.35
TNRC6A-215	ENST00000568903	RALBP1	Q15311	655 aa		12.86	□□□□□ -0.35
TNRC6A-215	ENST00000568903	FBXO22	Q8NEZ5	403 aa		12.86	□□□□□ -0.35
TNRC6A-215	ENST00000568903	PSMD1	Q99460	953 aa		12.86	□□□□□ -0.35
TNRC6A-215	ENST00000568903	PNN	Q9H307	717 aa	Known RBP	12.86	□□□□□ -0.35
TNRC6A-215	ENST00000568903	HACL1	Q9UJ83	578 aa		12.86	□□□□□ -0.35
TNRC6A-215	ENST00000568903	LTBP1	Q14766	1721 aa		12.85	□□□□□ -0.35
TNRC6A-215	ENST00000568903	EPS15	P42566	896 aa		12.85	□□□□□ -0.35
TNRC6A-215	ENST00000568903	RBM17	Q96I25	401 aa	Known RBP	12.85	□□□□□ -0.35
TNRC6A-215	ENST00000568903	CRAMP1	Q96RY5	1269 aa		12.85	□□□□□ -0.35
TNRC6A-215	ENST00000568903	UTP14A	Q9BVJ6	771 aa	Known RBP	12.85	□□□□□ -0.35
TNRC6A-215	ENST00000568903	WDR70	Q9NW82	654 aa		12.85	□□□□□ -0.35
TNRC6A-215	ENST00000568903	ADAMTS8	Q9UP79	889 aa		12.85	□□□□□ -0.35
TNRC6A-215	ENST00000568903	ERBB4	Q15303	1308 aa		12.85	□□□□□ -0.35
TNRC6A-215	ENST00000568903	CHL1	O00533	1208 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	TPRN	Q4KMQ1	711 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	SLC10A5	Q5PT55	438 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	PPP1R42	Q7Z4L9	355 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	NLRP10	Q86W26	655 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	GPC2	Q8N158	579 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	LARGE2	Q8N3Y3	721 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	CHPF2	Q9P2E5	772 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	RIC1	Q4ADV7	1423 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	ABCC4	O15439	1325 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	ADAMTSL1	Q8N6G6	1762 aa		12.84	□□□□□ -0.35
TNRC6A-215	ENST00000568903	SCN4A	P35499	1836 aa		12.83	□□□□□ -0.35
TNRC6A-215	ENST00000568903	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	VEGFB	P49765	207 aa		12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	SCNN1D	P51172	638 aa		12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	GOLGA2	Q08379	1002 aa		12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	AOC3	Q16853	763 aa		12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	TNS4	Q8IZW8	715 aa		12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	CNTROB	Q8N137	903 aa		12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	JDP2	Q8WYK2	163 aa		12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	NLRP3	Q96P20	1036 aa		12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.83	□□□□□ -0.36
TNRC6A-215	ENST00000568903	CNTNAP1	P78357	1384 aa		12.82	□□□□□ -0.36
TNRC6A-215	ENST00000568903	PRKCSH	P14314	528 aa	Predicted RBP	12.82	□□□□□ -0.36
TNRC6A-215	ENST00000568903	TCIRG1	Q13488	830 aa		12.82	□□□□□ -0.36
TNRC6A-215	ENST00000568903	PARP10	Q53GL7	1025 aa		12.82	□□□□□ -0.36
TNRC6A-215	ENST00000568903	ATP6V0A2	Q9Y487	856 aa		12.82	□□□□□ -0.36
TNRC6A-215	ENST00000568903	TAF1	P21675	1872 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	COL4A1	P02462	1669 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	TMEM88B	A6NKF7	163 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	ATP5J2-PTCD1	G3V325	749 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	TRAF5	O00463	557 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	FOXN1	O15353	648 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	PPIP5K2	O43314	1243 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	EIF6	P56537	245 aa	Known RBP	12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	CC2D2B	Q6DHV5	1058 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	RUNDC1	Q96C34	613 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	TMEM106C	Q9BVX2	250 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	BABAM1	Q9NWV8	329 aa		12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	TRMT112	Q9UI30	125 aa	Known RBP	12.81	□□□□□ -0.36
TNRC6A-215	ENST00000568903	SHTN1	A0MZ66	631 aa		12.8	□□□□□ -0.36
TNRC6A-215	ENST00000568903	CXCL9	Q07325	125 aa		12.8	□□□□□ -0.36
TNRC6A-215	ENST00000568903	RTL5	Q5HYW3	569 aa	Predicted RBP	12.8	□□□□□ -0.36
TNRC6A-215	ENST00000568903	MS4A3	Q96HJ5	214 aa		12.8	□□□□□ -0.36
TNRC6A-215	ENST00000568903	LAMB2	P55268	1798 aa		12.79	□□□□□ -0.36
TNRC6A-215	ENST00000568903	LMOD3	Q0VAK6	560 aa		12.79	□□□□□ -0.36
TNRC6A-215	ENST00000568903	HDGFL1	Q5TGJ6	251 aa		12.79	□□□□□ -0.36
TNRC6A-215	ENST00000568903	PNMA8A	Q86V59	439 aa	Predicted RBP	12.79	□□□□□ -0.36
TNRC6A-215	ENST00000568903	NIM1K	Q8IY84	436 aa		12.79	□□□□□ -0.36
TNRC6A-215	ENST00000568903	FAM89A	Q96GI7	184 aa		12.79	□□□□□ -0.36
TNRC6A-215	ENST00000568903	ELL2	O00472	640 aa	Predicted RBP	12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	RAD17	O75943	681 aa		12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	WDR43	Q15061	677 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	DUSP27	Q5VZP5	1158 aa		12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	CST9	Q5W186	159 aa		12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	DLK2	Q6UY11	383 aa		12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	SP8	Q8IXZ3	490 aa		12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	MBIP	Q9NS73	344 aa		12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	SH3TC1	Q8TE82	1336 aa		12.78	□□□□□ -0.36
TNRC6A-215	ENST00000568903	YDJC	A8MPS7	323 aa		12.77	□□□□□ -0.37
TNRC6A-215	ENST00000568903	APAF1	O14727	1248 aa		12.77	□□□□□ -0.37
TNRC6A-215	ENST00000568903	PPP1R37	O75864	691 aa		12.77	□□□□□ -0.37
TNRC6A-215	ENST00000568903	BBOX1	O75936	387 aa		12.77	□□□□□ -0.37
TNRC6A-215	ENST00000568903	GMPS	P49915	693 aa	Predicted RBP	12.77	□□□□□ -0.37
TNRC6A-215	ENST00000568903	DPP8	Q6V1X1	898 aa	Predicted RBP	12.77	□□□□□ -0.37

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