RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 RARAP10276 462 aa5.53□□□□□ -1.52
SMG1-212ENST00000566328 IREB2P48200 963 aaKnown RBP5.53□□□□□ -1.52
SMG1-212ENST00000566328 DCAF11Q8TEB1 546 aa5.53□□□□□ -1.52
SMG1-212ENST00000566328 VTI1AQ96AJ9 217 aa5.53□□□□□ -1.52
SMG1-212ENST00000566328 RNF112Q9ULX5 631 aa5.53□□□□□ -1.52
SMG1-212ENST00000566328 BCS1LQ9Y276 419 aa5.53□□□□□ -1.52
SMG1-212ENST00000566328 GPLD1P80108 840 aa5.52□□□□□ -1.53
SMG1-212ENST00000566328 PERM1Q5SV97 790 aa5.52□□□□□ -1.53
SMG1-212ENST00000566328 KRT25Q7Z3Z0 450 aa5.52□□□□□ -1.53
SMG1-212ENST00000566328 GLMNQ92990 594 aa5.52□□□□□ -1.53
SMG1-212ENST00000566328 LPIN3Q9BQK8 851 aa5.52□□□□□ -1.53
SMG1-212ENST00000566328 TARSP26639 723 aaKnown RBP5.51□□□□□ -1.53
SMG1-212ENST00000566328 NOS3P29474 1203 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 NRLP54845 237 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 DPYDQ12882 1025 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 PTK7Q13308 1070 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 DGKZQ13574 1117 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 GRIK5Q16478 980 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 C11orf91Q3C1V1 193 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 KLK14Q9P0G3 267 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 ZFATQ9P243 1243 aa5.51□□□□□ -1.53
SMG1-212ENST00000566328 FAM196BA6NMK8 535 aa5.5□□□□□ -1.53
SMG1-212ENST00000566328 ZBTB42B2RXF5 422 aa5.5□□□□□ -1.53
SMG1-212ENST00000566328 FOXO3O43524 673 aa5.5□□□□□ -1.53
SMG1-212ENST00000566328 SASH3O75995 380 aa5.5□□□□□ -1.53
SMG1-212ENST00000566328 MICAL2O94851 1124 aa5.5□□□□□ -1.53
SMG1-212ENST00000566328 EIF2AK2P19525 551 aaKnown RBP5.5□□□□□ -1.53
SMG1-212ENST00000566328 ANKMY2Q8IV38 441 aa5.5□□□□□ -1.53
SMG1-212ENST00000566328 IFT43Q96FT9 208 aa5.5□□□□□ -1.53
SMG1-212ENST00000566328 MRPL18Q9H0U6 180 aaKnown RBP5.5□□□□□ -1.53
SMG1-212ENST00000566328 SMG9Q9H0W8 520 aaKnown RBP5.5□□□□□ -1.53
SMG1-212ENST00000566328 RBSNQ9H1K0 784 aa5.5□□□□□ -1.53
SMG1-212ENST00000566328 SRA1Q9HD15 236 aaKnown RBP5.5□□□□□ -1.53
SMG1-212ENST00000566328 USP17L15C9J2P7 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L10C9JJH3 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L13C9JLJ4 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L12C9JPN9 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L11C9JVI0 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L21D6R901 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L18D6R9N7 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L22D6RA61 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L17D6RBQ6 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L19D6RCP7 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L20D6RJB6 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 DLL1O00548 723 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 PSAPP07602 524 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 MLLT1Q03111 559 aaPredicted RBP5.49□□□□□ -1.53
SMG1-212ENST00000566328 USP17L24Q0WX57 530 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 CRTC2Q53ET0 693 aaPredicted RBP5.49□□□□□ -1.53
SMG1-212ENST00000566328 PRR23CQ6ZRP0 262 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 PROSER2Q86WR7 435 aaPredicted RBP5.49□□□□□ -1.53
SMG1-212ENST00000566328 MAP4K3Q8IVH8 894 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 CALR3Q96L12 384 aaKnown RBP5.49□□□□□ -1.53
SMG1-212ENST00000566328 PPP1R12CQ9BZL4 782 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 AKTIPQ9H8T0 292 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 VRTNQ9H8Y1 702 aa5.49□□□□□ -1.53
SMG1-212ENST00000566328 TLR7Q9NYK1 1049 aaKnown RBP5.49□□□□□ -1.53
SMG1-212ENST00000566328 EGFRP00533 1210 aa5.48□□□□□ -1.53
SMG1-212ENST00000566328 GHRHP01286 108 aa5.48□□□□□ -1.53
SMG1-212ENST00000566328 GRNP28799 593 aaKnown RBP5.48□□□□□ -1.53
SMG1-212ENST00000566328 WEE1P30291 646 aa5.48□□□□□ -1.53
SMG1-212ENST00000566328 PLAURQ03405 335 aa5.48□□□□□ -1.53
SMG1-212ENST00000566328 KANK4Q5T7N3 995 aaPredicted RBP5.48□□□□□ -1.53
SMG1-212ENST00000566328 DZIP1LQ8IYY4 767 aaKnown RBP5.48□□□□□ -1.53
SMG1-212ENST00000566328 CACTIN-AS1Q8N1I8 211 aa5.48□□□□□ -1.53
SMG1-212ENST00000566328 TMEM130Q8N3G9 435 aa5.48□□□□□ -1.53
SMG1-212ENST00000566328 MYO19Q96H55 970 aa5.48□□□□□ -1.53
SMG1-212ENST00000566328 PCMTD2Q9NV79 361 aa5.48□□□□□ -1.53
SMG1-212ENST00000566328 LOC102724428A0A0B4J2F2 783 aa5.47□□□□□ -1.53
SMG1-212ENST00000566328 XYLBO75191 536 aa5.47□□□□□ -1.53
SMG1-212ENST00000566328 DEAF1O75398 565 aaPredicted RBP5.47□□□□□ -1.53
SMG1-212ENST00000566328 LGR5O75473 907 aa5.47□□□□□ -1.53
SMG1-212ENST00000566328 SIK1P57059 783 aa5.47□□□□□ -1.53
SMG1-212ENST00000566328 HFE2Q6ZVN8 426 aa5.47□□□□□ -1.53
SMG1-212ENST00000566328 FNBP4Q8N3X1 1017 aaPredicted RBP5.47□□□□□ -1.53
SMG1-212ENST00000566328 PLD4Q96BZ4 506 aa5.47□□□□□ -1.53
SMG1-212ENST00000566328 MEGF10Q96KG7 1140 aa5.47□□□□□ -1.53
SMG1-212ENST00000566328 MUC3BQ9H195 1237 aa5.47□□□□□ -1.53
SMG1-212ENST00000566328 QTRT2Q9H974 415 aaKnown RBP5.47□□□□□ -1.53
SMG1-212ENST00000566328 RTCBQ9Y3I0 505 aaKnown RBP5.47□□□□□ -1.53
SMG1-212ENST00000566328 GSC2O15499 205 aa5.46□□□□□ -1.54
SMG1-212ENST00000566328 PTCD1O75127 700 aaKnown RBP5.46□□□□□ -1.54
SMG1-212ENST00000566328 FSTP19883 344 aa5.46□□□□□ -1.54
SMG1-212ENST00000566328 CMTR1Q8N1G2 835 aaKnown RBP5.46□□□□□ -1.54
SMG1-212ENST00000566328 IL22RA1Q8N6P7 574 aa5.46□□□□□ -1.54
SMG1-212ENST00000566328 LMOD1P29536 600 aaPredicted RBP5.45□□□□□ -1.54
SMG1-212ENST00000566328 SOX18P35713 384 aa5.45□□□□□ -1.54
SMG1-212ENST00000566328 GDF6Q6KF10 455 aaPredicted RBP5.45□□□□□ -1.54
SMG1-212ENST00000566328 RGL4Q8IZJ4 473 aa5.45□□□□□ -1.54
SMG1-212ENST00000566328 FAM200AQ8TCP9 573 aa5.45□□□□□ -1.54
SMG1-212ENST00000566328 CLUAP1Q96AJ1 413 aa5.45□□□□□ -1.54
SMG1-212ENST00000566328 F8W735 103 aaPredicted RBP5.44□□□□□ -1.54
SMG1-212ENST00000566328 OPLAHO14841 1288 aa5.44□□□□□ -1.54
SMG1-212ENST00000566328 HOXD8P13378 290 aaPredicted RBP5.44□□□□□ -1.54
SMG1-212ENST00000566328 MCTP1Q6DN14 999 aa5.44□□□□□ -1.54
SMG1-212ENST00000566328 TREML1Q86YW5 311 aa5.44□□□□□ -1.54
SMG1-212ENST00000566328 J3QW42 95 aa5.43□□□□□ -1.54
SMG1-212ENST00000566328 PAX4O43316 350 aa5.43□□□□□ -1.54
SMG1-212ENST00000566328 MMP20O60882 483 aa5.43□□□□□ -1.54
SMG1-212ENST00000566328 ALX3O95076 343 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms