RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZNF518AQ6AHZ1 1483 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 ADCY9O60503 1353 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 SDSP20132 328 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 LONRF2Q1L5Z9 754 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TBC1D22AQ8WUA7 517 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 SSH2Q76I76 1423 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 STX6O43752 255 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 RHOXF2BP0C7M4 288 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 CPLX2Q6PUV4 134 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 DZIP1Q86YF9 867 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 RHOXF2Q9BQY4 288 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 ADAM21Q9UKJ8 722 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 ATP6V1DQ9Y5K8 247 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 RUFY3Q7L099 469 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 MSANTD4Q8NCY6 345 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 RASSF8Q8NHQ8 419 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 ATRIPQ8WXE1 791 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 SH3BP1Q9Y3L3 701 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 ODF2Q5BJF6 829 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 TRIM5Q9C035 493 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 ZNF777Q9ULD5 760 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 GNAI1P63096 354 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 HNRNPLLQ8WVV9 542 aaKnown RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 CDCA5Q96FF9 252 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 PARD6BQ9BYG5 372 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 ELF1P32519 619 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 MAP2K2P36507 400 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 BRD3Q15059 726 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 HOMER1Q86YM7 354 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 FANCD2Q9BXW9 1451 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 SYT1P21579 422 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 CHMLP26374 656 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 PDE1AP54750 535 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 ANO6Q4KMQ2 910 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 LUZP1Q86V48 1076 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 LIMCH1Q9UPQ0 1083 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 PARP3Q9Y6F1 533 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 H0YHG0 523 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 SH3BP5O60239 455 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 ST5P78524 1137 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 E4F1Q66K89 784 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 ARMCX5Q6P1M9 558 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 C1orf115Q9H7X2 142 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 NSD2O96028 1365 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 GBP2P32456 591 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 C11orf57Q6ZUT1 292 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 ERC1Q8IUD2 1116 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 ADGBQ8N7X0 1667 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 EXOC5O00471 708 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 PREPLQ4J6C6 727 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 CCDC181Q5TID7 509 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 ZSCAN31Q96LW9 406 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 PAIP2Q9BPZ3 127 aaKnown RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 UPF3BQ9BZI7 483 aaKnown RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 SBNO2Q9Y2G9 1366 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 ANKRD18BA2A2Z9 1011 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 VAMP4O75379 141 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 MICALL1Q8N3F8 863 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 PPP1R13BQ96KQ4 1090 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 RAB21Q9UL25 225 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 COL3A1P02461 1466 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 EVCP57679 992 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 APOBRQ0VD83 1088 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 FCHSD1Q86WN1 690 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 C16orf71Q8IYS4 520 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 ABCF2Q9UG63 623 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 MARCH6O60337 910 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 RNF217Q8TC41 542 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 ARHGAP5Q13017 1502 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 PAX3P23760 479 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 PROCA1Q8NCQ7 364 aaPredicted RBP3.37□□□□□ -1.87
CHD9-218ENST00000566029 FAXDC2Q96IV6 333 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 DNAJC25Q9H1X3 360 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 PDRG1Q9NUG6 133 aa3.37□□□□□ -1.87
CHD9-218ENST00000566029 EFCAB8A8MWE9 144 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 SMC1AQ14683 1233 aaKnown RBP3.36□□□□□ -1.87
CHD9-218ENST00000566029 AMOTL1Q8IY63 956 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 SNX14Q9Y5W7 946 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 PTPRTO14522 1441 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 ANKRD62A6NC57 917 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 JAKMIP3Q5VZ66 844 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 RABGGTAQ92696 567 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 FAM212AQ96EL1 285 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 GNL3LQ9NVN8 582 aaKnown RBP3.36□□□□□ -1.87
CHD9-218ENST00000566029 AKAP2Q9Y2D5 859 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 FAN1Q9Y2M0 1017 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 NSD3Q9BZ95 1437 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 TRPM1Q7Z4N2 1603 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 USP5P45974 858 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 PSME1Q06323 249 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 BIRC2Q13490 618 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 GPR161Q8N6U8 529 aaKnown RBP3.36□□□□□ -1.87
CHD9-218ENST00000566029 RABEP2Q9H5N1 569 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 CPSF1Q10570 1443 aaKnown RBP3.36□□□□□ -1.87
CHD9-218ENST00000566029 GPTP24298 496 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 LMAN1P49257 510 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 CCDC30Q5VVM6 783 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 LARGE1O95461 756 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 SEMA3FQ13275 785 aa3.36□□□□□ -1.87
CHD9-218ENST00000566029 UNC13BO14795 1591 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms