RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 GRAPQ13588 217 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 KRT24Q2M2I5 525 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 CST9Q5W186 159 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 CYP4F22Q6NT55 531 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 GRAPLQ8TC17 118 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 CAPNS2Q96L46 248 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 TLL2Q9Y6L7 1015 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 TRPM7Q96QT4 1865 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 GRM1Q13255 1194 aa15.15■□□□□ 0.02
NSMCE1-209ENST00000565384 NEUROD2Q15784 382 aa15.15■□□□□ 0.02
NSMCE1-209ENST00000565384 CIAPIN1Q6FI81 312 aa15.15■□□□□ 0.02
NSMCE1-209ENST00000565384 CHPF2Q9P2E5 772 aa15.15■□□□□ 0.02
NSMCE1-209ENST00000565384 CDHR2Q9BYE9 1310 aa15.15■□□□□ 0.02
NSMCE1-209ENST00000565384 CHL1O00533 1208 aa15.14■□□□□ 0.01
NSMCE1-209ENST00000565384 ZNF428Q96B54 188 aa15.14■□□□□ 0.01
NSMCE1-209ENST00000565384 BCL2L13Q9BXK5 485 aa15.14■□□□□ 0.01
NSMCE1-209ENST00000565384 LAS1LQ9Y4W2 734 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-209ENST00000565384 DUOX1Q9NRD9 1551 aa15.14■□□□□ 0.01
NSMCE1-209ENST00000565384 LRRC37AA6NMS7 1700 aa15.13■□□□□ 0.01
NSMCE1-209ENST00000565384 RAD17O75943 681 aa15.13■□□□□ 0.01
NSMCE1-209ENST00000565384 TNIP1Q15025 636 aa15.13■□□□□ 0.01
NSMCE1-209ENST00000565384 TMC4Q7Z404 712 aa15.13■□□□□ 0.01
NSMCE1-209ENST00000565384 GPR101Q96P66 508 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-209ENST00000565384 GLIS2Q9BZE0 524 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-209ENST00000565384 MYBBP1AQ9BQG0 1328 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-209ENST00000565384 DDX60Q8IY21 1712 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 YDJCA8MPS7 323 aa15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 CELF2O95319 508 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 HDGFL1Q5TGJ6 251 aa15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 PLBD2Q8NHP8 589 aa15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 BEGAINQ9BUH8 593 aa15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 PGAP2Q9UHJ9 254 aa15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 TAF1P21675 1872 aa15.12■□□□□ 0.01
NSMCE1-209ENST00000565384 HOXB7P09629 217 aa15.11■□□□□ 0.01
NSMCE1-209ENST00000565384 HIRAP54198 1017 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-209ENST00000565384 SAPCD2Q86UD0 394 aa15.11■□□□□ 0.01
NSMCE1-209ENST00000565384 TRPM4Q8TD43 1214 aa15.11■□□□□ 0.01
NSMCE1-209ENST00000565384 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
NSMCE1-209ENST00000565384 RUNDC1Q96C34 613 aa15.11■□□□□ 0.01
NSMCE1-209ENST00000565384 ISCA1Q9BUE6 129 aa15.11■□□□□ 0.01
NSMCE1-209ENST00000565384 SHTN1A0MZ66 631 aa15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 AOC2O75106 756 aa15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 ANKRD13DQ6ZTN6 518 aa15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 CELF1Q92879 486 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 FAM89AQ96GI7 184 aa15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 ABHD8Q96I13 439 aa15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 ZNF408Q9H9D4 720 aa15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 DBF4Q9UBU7 674 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 CNOT7Q9UIV1 285 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-209ENST00000565384 ATP5J2-PTCD1G3V325 749 aa15.09■□□□□ 0.01
NSMCE1-209ENST00000565384 MAP2K2P36507 400 aa15.09■□□□□ 0.01
NSMCE1-209ENST00000565384 SF3B3Q15393 1217 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-209ENST00000565384 MICALL2Q8IY33 904 aa15.09■□□□□ 0.01
NSMCE1-209ENST00000565384 HHIPL1Q96JK4 782 aa15.09■□□□□ 0.01
NSMCE1-209ENST00000565384 COL4A1P02462 1669 aa15.09■□□□□ 0.01
NSMCE1-209ENST00000565384 H7C1D1 291 aa15.08■□□□□ 0
NSMCE1-209ENST00000565384 WASHC4Q2M389 1173 aa15.08■□□□□ 0
NSMCE1-209ENST00000565384 CDC37L1Q7L3B6 337 aa15.08■□□□□ 0
NSMCE1-209ENST00000565384 DBNDD1Q9H9R9 158 aa15.08■□□□□ 0
NSMCE1-209ENST00000565384 TSKSQ9UJT2 592 aa15.08■□□□□ 0
NSMCE1-209ENST00000565384 NSFL1CQ9UNZ2 370 aaKnown RBP15.08■□□□□ 0
NSMCE1-209ENST00000565384 ZBTB12Q9Y330 459 aaPredicted RBP15.08■□□□□ 0
NSMCE1-209ENST00000565384 PSMD14O00487 310 aa15.07■□□□□ 0
NSMCE1-209ENST00000565384 GPSM2P81274 684 aa15.07■□□□□ 0
NSMCE1-209ENST00000565384 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
NSMCE1-209ENST00000565384 RTL5Q5HYW3 569 aaPredicted RBP15.07■□□□□ 0
NSMCE1-209ENST00000565384 DUSP27Q5VZP5 1158 aa15.07■□□□□ 0
NSMCE1-209ENST00000565384 CFAP44Q96MT7 982 aa15.07■□□□□ 0
NSMCE1-209ENST00000565384 HYPKQ9NX55 129 aa15.07■□□□□ 0
NSMCE1-209ENST00000565384 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
NSMCE1-209ENST00000565384 C6orf229H3BNL8 230 aa15.06■□□□□ 0
NSMCE1-209ENST00000565384 IRS4O14654 1257 aaPredicted RBP15.06■□□□□ 0
NSMCE1-209ENST00000565384 RIMBP2O15034 1052 aa15.06■□□□□ 0
NSMCE1-209ENST00000565384 SAMD7Q7Z3H4 446 aa15.06■□□□□ 0
NSMCE1-209ENST00000565384 DPF2Q92785 391 aa15.06■□□□□ 0
NSMCE1-209ENST00000565384 POLLQ9UGP5 575 aa15.06■□□□□ 0
NSMCE1-209ENST00000565384 ECE2O60344 883 aa15.05■□□□□ -0
NSMCE1-209ENST00000565384 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ -0
NSMCE1-209ENST00000565384 USP48Q86UV5 1035 aa15.05■□□□□ -0
NSMCE1-209ENST00000565384 EYA3Q99504 573 aa15.05■□□□□ -0
NSMCE1-209ENST00000565384 MBIPQ9NS73 344 aa15.05■□□□□ -0
NSMCE1-209ENST00000565384 RTL9Q8NET4 1388 aa15.04■□□□□ -0
NSMCE1-209ENST00000565384 CA12O43570 354 aa15.04■□□□□ -0
NSMCE1-209ENST00000565384 RPS12P25398 132 aaKnown RBP15.04■□□□□ -0
NSMCE1-209ENST00000565384 TRIM28Q13263 835 aaKnown RBP15.04■□□□□ -0
NSMCE1-209ENST00000565384 DOK7Q18PE1 504 aa15.04■□□□□ -0
NSMCE1-209ENST00000565384 TBC1D10BQ4KMP7 808 aaPredicted RBP15.04■□□□□ -0
NSMCE1-209ENST00000565384 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
NSMCE1-209ENST00000565384 TBC1D16Q8TBP0 767 aa15.04■□□□□ -0
NSMCE1-209ENST00000565384 EGFRP00533 1210 aa15.03■□□□□ -0
NSMCE1-209ENST00000565384 RPS8P62241 208 aaKnown RBP15.03■□□□□ -0
NSMCE1-209ENST00000565384 GOLGA2Q08379 1002 aa15.03■□□□□ -0
NSMCE1-209ENST00000565384 DLK2Q6UY11 383 aa15.03■□□□□ -0
NSMCE1-209ENST00000565384 ZBTB38Q8NAP3 1195 aaPredicted RBP15.03■□□□□ -0
NSMCE1-209ENST00000565384 KCNQ5Q9NR82 932 aa15.03■□□□□ -0
NSMCE1-209ENST00000565384 CCDC85CA6NKD9 419 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms