RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ZFATQ9P243 1243 aa9.53□□□□□ -0.88
UBR1-205ENST00000564540 STIM2Q9P246 746 aa9.53□□□□□ -0.88
UBR1-205ENST00000564540 SASH3O75995 380 aa9.52□□□□□ -0.89
UBR1-205ENST00000564540 ALAS2P22557 587 aa9.52□□□□□ -0.89
UBR1-205ENST00000564540 TARSP26639 723 aaKnown RBP9.52□□□□□ -0.89
UBR1-205ENST00000564540 LINC00114Q6XXX2 140 aa9.52□□□□□ -0.89
UBR1-205ENST00000564540 MKL2Q9ULH7 1088 aa9.52□□□□□ -0.89
UBR1-205ENST00000564540 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
UBR1-205ENST00000564540 GTF3C2Q8WUA4 911 aaPredicted RBP9.51□□□□□ -0.89
UBR1-205ENST00000564540 UBE2OQ9C0C9 1292 aaKnown RBP9.51□□□□□ -0.89
UBR1-205ENST00000564540 USTQ9Y2C2 406 aa9.51□□□□□ -0.89
UBR1-205ENST00000564540 STARD13Q9Y3M8 1113 aa9.51□□□□□ -0.89
UBR1-205ENST00000564540 KCNMB2Q9Y691 235 aa9.51□□□□□ -0.89
UBR1-205ENST00000564540 XYLBO75191 536 aa9.5□□□□□ -0.89
UBR1-205ENST00000564540 COL8A1P27658 744 aa9.5□□□□□ -0.89
UBR1-205ENST00000564540 ZAP70P43403 619 aa9.5□□□□□ -0.89
UBR1-205ENST00000564540 MTMR3Q13615 1198 aa9.5□□□□□ -0.89
UBR1-205ENST00000564540 KRTAP1-3Q8IUG1 177 aa9.5□□□□□ -0.89
UBR1-205ENST00000564540 EFCC1Q9HA90 598 aa9.5□□□□□ -0.89
UBR1-205ENST00000564540 TRIP4Q15650 581 aaPredicted RBP9.49□□□□□ -0.89
UBR1-205ENST00000564540 ATCAYQ86WG3 371 aa9.49□□□□□ -0.89
UBR1-205ENST00000564540 HELQQ8TDG4 1101 aa9.49□□□□□ -0.89
UBR1-205ENST00000564540 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
UBR1-205ENST00000564540 DNAJB12Q9NXW2 375 aaKnown RBP9.49□□□□□ -0.89
UBR1-205ENST00000564540 SLC6A14Q9UN76 642 aa9.49□□□□□ -0.89
UBR1-205ENST00000564540 M0R082 166 aa9.48□□□□□ -0.89
UBR1-205ENST00000564540 ALBP02768 609 aa9.48□□□□□ -0.89
UBR1-205ENST00000564540 RARAP10276 462 aa9.48□□□□□ -0.89
UBR1-205ENST00000564540 C8orf86Q6ZUL3 223 aa9.48□□□□□ -0.89
UBR1-205ENST00000564540 ZNF417Q8TAU3 575 aa9.48□□□□□ -0.89
UBR1-205ENST00000564540 GPR152Q8TDT2 470 aa9.48□□□□□ -0.89
UBR1-205ENST00000564540 ZNF587Q96SQ5 575 aaPredicted RBP9.48□□□□□ -0.89
UBR1-205ENST00000564540 GNB5O14775 395 aa9.47□□□□□ -0.89
UBR1-205ENST00000564540 MAP3K6O95382 1288 aa9.47□□□□□ -0.89
UBR1-205ENST00000564540 EGFRP00533 1210 aa9.47□□□□□ -0.89
UBR1-205ENST00000564540 ABTB2Q8N961 1025 aa9.47□□□□□ -0.89
UBR1-205ENST00000564540 C11orf16Q9NQ32 467 aa9.47□□□□□ -0.89
UBR1-205ENST00000564540 DHX32Q7L7V1 743 aaKnown RBP9.46□□□□□ -0.9
UBR1-205ENST00000564540 PIK3R5Q8WYR1 880 aa9.46□□□□□ -0.9
UBR1-205ENST00000564540 NAGPAQ9UK23 515 aa9.46□□□□□ -0.9
UBR1-205ENST00000564540 ZBTB42B2RXF5 422 aa9.45□□□□□ -0.9
UBR1-205ENST00000564540 MPSTP25325 297 aa9.45□□□□□ -0.9
UBR1-205ENST00000564540 MLLT1Q03111 559 aaPredicted RBP9.45□□□□□ -0.9
UBR1-205ENST00000564540 MICALL1Q8N3F8 863 aa9.45□□□□□ -0.9
UBR1-205ENST00000564540 TRIM11Q96F44 468 aa9.45□□□□□ -0.9
UBR1-205ENST00000564540 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
UBR1-205ENST00000564540 C20orf204Q6ZNR8 217 aa9.44□□□□□ -0.9
UBR1-205ENST00000564540 ANO2Q9NQ90 1003 aa9.44□□□□□ -0.9
UBR1-205ENST00000564540 FAM13BQ9NYF5 915 aa9.44□□□□□ -0.9
UBR1-205ENST00000564540 MMP20O60882 483 aa9.43□□□□□ -0.9
UBR1-205ENST00000564540 ABL1P00519 1130 aa9.43□□□□□ -0.9
UBR1-205ENST00000564540 ZNF211Q13398 564 aaPredicted RBP9.43□□□□□ -0.9
UBR1-205ENST00000564540 COL9A3Q14050 684 aaPredicted RBP9.43□□□□□ -0.9
UBR1-205ENST00000564540 FAM35AQ86V20 835 aa9.43□□□□□ -0.9
UBR1-205ENST00000564540 NUDT8Q8WV74 236 aa9.43□□□□□ -0.9
UBR1-205ENST00000564540 CPB1P15086 417 aa9.42□□□□□ -0.9
UBR1-205ENST00000564540 ITGB7P26010 798 aa9.42□□□□□ -0.9
UBR1-205ENST00000564540 EIF1AXP47813 144 aaKnown RBP9.42□□□□□ -0.9
UBR1-205ENST00000564540 PSAPL1Q6NUJ1 521 aa9.42□□□□□ -0.9
UBR1-205ENST00000564540 HFE2Q6ZVN8 426 aa9.42□□□□□ -0.9
UBR1-205ENST00000564540 TRPM4Q8TD43 1214 aa9.42□□□□□ -0.9
UBR1-205ENST00000564540 NUDT16Q96DE0 195 aaKnown RBP9.42□□□□□ -0.9
UBR1-205ENST00000564540 PLVAPQ9BX97 442 aa9.42□□□□□ -0.9
UBR1-205ENST00000564540 TLR7Q9NYK1 1049 aaKnown RBP9.42□□□□□ -0.9
UBR1-205ENST00000564540 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
UBR1-205ENST00000564540 NLRP13Q86W25 1043 aa9.41□□□□□ -0.9
UBR1-205ENST00000564540 EDEM1Q92611 657 aa9.41□□□□□ -0.9
UBR1-205ENST00000564540 JPH1Q9HDC5 661 aaPredicted RBP9.41□□□□□ -0.9
UBR1-205ENST00000564540 PRDM6Q9NQX0 595 aa9.41□□□□□ -0.9
UBR1-205ENST00000564540 MTMR7Q9Y216 660 aa9.41□□□□□ -0.9
UBR1-205ENST00000564540 PIK3R2O00459 728 aa9.4□□□□□ -0.9
UBR1-205ENST00000564540 SERPINB4P48594 390 aa9.4□□□□□ -0.9
UBR1-205ENST00000564540 GPLD1P80108 840 aa9.4□□□□□ -0.9
UBR1-205ENST00000564540 DNM1Q05193 864 aaKnown RBP9.4□□□□□ -0.9
UBR1-205ENST00000564540 PERM1Q5SV97 790 aa9.4□□□□□ -0.9
UBR1-205ENST00000564540 B4GALNT3Q6L9W6 998 aa9.4□□□□□ -0.9
UBR1-205ENST00000564540 NSUN5Q96P11 429 aaKnown RBP9.4□□□□□ -0.9
UBR1-205ENST00000564540 LILRB5O75023 590 aa9.39□□□□□ -0.91
UBR1-205ENST00000564540 NRLP54845 237 aa9.39□□□□□ -0.91
UBR1-205ENST00000564540 FKBP4Q02790 459 aaKnown RBP eCLIP9.39□□□□□ -0.91
UBR1-205ENST00000564540 PCSK7Q16549 785 aa9.39□□□□□ -0.91
UBR1-205ENST00000564540 KRTAP4-12Q9BQ66 201 aa9.39□□□□□ -0.91
UBR1-205ENST00000564540 FNDC3AQ9Y2H6 1198 aaKnown RBP9.39□□□□□ -0.91
UBR1-205ENST00000564540 C1QTNF9BB2RNN3 333 aa9.38□□□□□ -0.91
UBR1-205ENST00000564540 J3QW42 95 aa9.38□□□□□ -0.91
UBR1-205ENST00000564540 PDGFAP04085 211 aa9.38□□□□□ -0.91
UBR1-205ENST00000564540 PSAPP07602 524 aa9.38□□□□□ -0.91
UBR1-205ENST00000564540 NID1P14543 1247 aa9.38□□□□□ -0.91
UBR1-205ENST00000564540 NPR3P17342 541 aa9.38□□□□□ -0.91
UBR1-205ENST00000564540 PLAURQ03405 335 aa9.38□□□□□ -0.91
UBR1-205ENST00000564540 LPIN3Q9BQK8 851 aa9.38□□□□□ -0.91
UBR1-205ENST00000564540 NOP53Q9NZM5 478 aaKnown RBP9.38□□□□□ -0.91
UBR1-205ENST00000564540 A6NHS1 94 aa9.37□□□□□ -0.91
UBR1-205ENST00000564540 RGS9O75916 674 aaPredicted RBP9.37□□□□□ -0.91
UBR1-205ENST00000564540 ARID4AP29374 1257 aaPredicted RBP9.37□□□□□ -0.91
UBR1-205ENST00000564540 SF3B2Q13435 895 aaKnown RBP9.37□□□□□ -0.91
UBR1-205ENST00000564540 AAMPQ13685 434 aa9.37□□□□□ -0.91
UBR1-205ENST00000564540 CD163Q86VB7 1156 aa9.37□□□□□ -0.91
UBR1-205ENST00000564540 GGNBP2Q9H3C7 697 aa9.37□□□□□ -0.91
UBR1-205ENST00000564540 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms