RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 FSD1Q9BTV5 496 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 ISCA1Q9BUE6 129 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 BOLA2Q9H3K6 86 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 TMEM63CQ9P1W3 806 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 TAF5LO75529 589 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 TCHHQ07283 1943 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 LARGE1O95461 756 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 PIP4K2AP48426 406 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 RNF20Q5VTR2 975 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 LRSAM1Q6UWE0 723 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 CICQ96RK0 1608 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 STX6O43752 255 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 SYT1P21579 422 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 LMBR1LQ6UX01 489 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 NOL8Q76FK4 1167 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 PLA2G12BQ9BX93 195 aa11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
PDXDC1-210ENST00000563679 LAMA4Q16363 1823 aa11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 COL16A1Q07092 1604 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 AHDC1Q5TGY3 1603 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 ZNF335Q9H4Z2 1342 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 CLCN1P35523 988 aa11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 IL15P40933 162 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 ANKRD1Q15327 319 aa11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 CHAMP1Q96JM3 812 aa11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 KDM4FA0A1W2PPD8 638 aa11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 RPS6KB1P23443 525 aa11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 PDLIM2Q96JY6 352 aa11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
PDXDC1-210ENST00000563679 F13A1P00488 732 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 KRT32Q14532 448 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 DBNDD2Q9BQY9 259 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 TEX13AQ9BXU3 409 aaPredicted RBP11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 A1BGP04217 495 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 CPA1P15085 419 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 ME3Q16798 604 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 KBTBD3Q8NAB2 608 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 ATP6V1DQ9Y5K8 247 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 RREB1Q92766 1687 aa11.86□□□□□ -0.51
PDXDC1-210ENST00000563679 HS1BP3Q53T59 392 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 DDX60Q8IY21 1712 aaKnown RBP11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 LRP5O75197 1615 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 ABCC12Q96J65 1359 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 EYA2O00167 538 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 PRIM1P49642 420 aaKnown RBP11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 USP48Q86UV5 1035 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 JARID2Q92833 1246 aaPredicted RBP11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 ARXQ96QS3 562 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 HELLSQ9NRZ9 838 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 MYH3P11055 1940 aa11.85□□□□□ -0.51
PDXDC1-210ENST00000563679 GJB2P29033 226 aa11.84□□□□□ -0.51
PDXDC1-210ENST00000563679 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
PDXDC1-210ENST00000563679 BLOC1S2Q6QNY1 142 aa11.84□□□□□ -0.51
PDXDC1-210ENST00000563679 BCL9O00512 1426 aa11.84□□□□□ -0.51
PDXDC1-210ENST00000563679 NCLP19338 710 aaKnown RBP11.84□□□□□ -0.51
PDXDC1-210ENST00000563679 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
PDXDC1-210ENST00000563679 CDHR2Q9BYE9 1310 aa11.84□□□□□ -0.51
PDXDC1-210ENST00000563679 ARAP2Q8WZ64 1704 aa11.83□□□□□ -0.51
PDXDC1-210ENST00000563679 PCCAP05165 728 aaPredicted RBP11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 FOXD4L5Q5VV16 416 aaPredicted RBP11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 FOXD4L4Q8WXT5 416 aaPredicted RBP11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 EDC3Q96F86 508 aaKnown RBP11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 PHF14O94880 888 aa11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 CSF1RP07333 972 aa11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 UBE2HP62256 183 aa11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 DSCC1Q9BVC3 393 aa11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 TMOD3Q9NYL9 352 aa11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 MYH7P12883 1935 aa11.83□□□□□ -0.52
PDXDC1-210ENST00000563679 ESPNB1AK53 854 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 GADD45BO75293 160 aaPredicted RBP11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 KCNJ4P48050 445 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 ZMYM1Q5SVZ6 1142 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 NRAPQ86VF7 1730 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 COL9A3Q14050 684 aaPredicted RBP11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 CSPP1Q1MSJ5 1256 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 MYH15Q9Y2K3 1946 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 SYCE3A1L190 88 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 PDCP20941 246 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 PAG1Q9NWQ8 432 aa11.82□□□□□ -0.52
PDXDC1-210ENST00000563679 NUP98P52948 1817 aa11.81□□□□□ -0.52
PDXDC1-210ENST00000563679 NWD2Q9ULI1 1742 aa11.81□□□□□ -0.52
PDXDC1-210ENST00000563679 LETM1O95202 739 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms