RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 SNX29Q8TEQ0 813 aa7.69□□□□□ -1.18
CNOT1-203ENST00000562046 SETDB2Q96T68 719 aa7.69□□□□□ -1.18
CNOT1-203ENST00000562046 DNAJC25Q9H1X3 360 aa7.69□□□□□ -1.18
CNOT1-203ENST00000562046 CNTN3Q9P232 1028 aa7.69□□□□□ -1.18
CNOT1-203ENST00000562046 WWC3Q9ULE0 1092 aa7.69□□□□□ -1.18
CNOT1-203ENST00000562046 PHF24Q9UPV7 400 aa7.69□□□□□ -1.18
CNOT1-203ENST00000562046 PNMA6FA0A0J9YX94 578 aa7.68□□□□□ -1.18
CNOT1-203ENST00000562046 H3BM21 787 aa7.68□□□□□ -1.18
CNOT1-203ENST00000562046 EIF1AYO14602 144 aaKnown RBP7.68□□□□□ -1.18
CNOT1-203ENST00000562046 LDHBP07195 334 aaKnown RBP7.68□□□□□ -1.18
CNOT1-203ENST00000562046 RBM25P49756 843 aaKnown RBP7.68□□□□□ -1.18
CNOT1-203ENST00000562046 VEGFBP49765 207 aa7.68□□□□□ -1.18
CNOT1-203ENST00000562046 SPEM2Q0P670 501 aa7.68□□□□□ -1.18
CNOT1-203ENST00000562046 GPR161Q8N6U8 529 aaKnown RBP7.68□□□□□ -1.18
CNOT1-203ENST00000562046 EFCC1Q9HA90 598 aa7.68□□□□□ -1.18
CNOT1-203ENST00000562046 ZFYVE28Q9HCC9 887 aa7.68□□□□□ -1.18
CNOT1-203ENST00000562046 ABI2Q9NYB9 513 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-203ENST00000562046 C2CD2LO14523 706 aa7.67□□□□□ -1.18
CNOT1-203ENST00000562046 MMP20O60882 483 aa7.67□□□□□ -1.18
CNOT1-203ENST00000562046 NEFLP07196 543 aa7.67□□□□□ -1.18
CNOT1-203ENST00000562046 GAS6Q14393 721 aa7.67□□□□□ -1.18
CNOT1-203ENST00000562046 ZNF326Q5BKZ1 582 aaKnown RBP7.67□□□□□ -1.18
CNOT1-203ENST00000562046 USPL1Q5W0Q7 1092 aa7.67□□□□□ -1.18
CNOT1-203ENST00000562046 FOXR1Q6PIV2 292 aa7.67□□□□□ -1.18
CNOT1-203ENST00000562046 C1orf127Q8N9H9 656 aa7.67□□□□□ -1.18
CNOT1-203ENST00000562046 TRERF1Q96PN7 1200 aa7.67□□□□□ -1.18
CNOT1-203ENST00000562046 KIAA1522Q9P206 1035 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-203ENST00000562046 CPNE3O75131 537 aaKnown RBP7.66□□□□□ -1.18
CNOT1-203ENST00000562046 PRPF40AO75400 957 aaKnown RBP7.66□□□□□ -1.18
CNOT1-203ENST00000562046 VSIG8P0DPA2 414 aa7.66□□□□□ -1.18
CNOT1-203ENST00000562046 KRT25Q7Z3Z0 450 aa7.66□□□□□ -1.18
CNOT1-203ENST00000562046 RNF19AQ9NV58 838 aa7.66□□□□□ -1.18
CNOT1-203ENST00000562046 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-203ENST00000562046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-203ENST00000562046 PHACTR2O75167 634 aa7.65□□□□□ -1.18
CNOT1-203ENST00000562046 MAP3K6O95382 1288 aa7.65□□□□□ -1.18
CNOT1-203ENST00000562046 CYP2E1P05181 493 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-203ENST00000562046 NFKB1P19838 968 aa7.65□□□□□ -1.18
CNOT1-203ENST00000562046 ZNF787Q6DD87 383 aa7.65□□□□□ -1.18
CNOT1-203ENST00000562046 OR13H1Q8NG92 308 aa7.65□□□□□ -1.18
CNOT1-203ENST00000562046 FBF1Q8TES7 1133 aa7.65□□□□□ -1.18
CNOT1-203ENST00000562046 EREGO14944 169 aa7.64□□□□□ -1.19
CNOT1-203ENST00000562046 RARAP10276 462 aa7.64□□□□□ -1.19
CNOT1-203ENST00000562046 HOXD8P13378 290 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-203ENST00000562046 TTC39BQ5VTQ0 682 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-203ENST00000562046 ALG1LQ6GMV1 187 aa7.64□□□□□ -1.19
CNOT1-203ENST00000562046 RAB44Q7Z6P3 723 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-203ENST00000562046 BHMTQ93088 406 aa7.64□□□□□ -1.19
CNOT1-203ENST00000562046 CCDC74AQ96AQ1 378 aa7.64□□□□□ -1.19
CNOT1-203ENST00000562046 DUSP9Q99956 384 aaKnown RBP7.64□□□□□ -1.19
CNOT1-203ENST00000562046 TLR7Q9NYK1 1049 aaKnown RBP7.64□□□□□ -1.19
CNOT1-203ENST00000562046 TERTO14746 1132 aaKnown RBP7.63□□□□□ -1.19
CNOT1-203ENST00000562046 SOX18P35713 384 aa7.63□□□□□ -1.19
CNOT1-203ENST00000562046 FGD1P98174 961 aa7.63□□□□□ -1.19
CNOT1-203ENST00000562046 GALNT12Q8IXK2 581 aa7.63□□□□□ -1.19
CNOT1-203ENST00000562046 SALL4Q9UJQ4 1053 aa7.63□□□□□ -1.19
CNOT1-203ENST00000562046 ERBB4Q15303 1308 aa7.62□□□□□ -1.19
CNOT1-203ENST00000562046 VAMP1P23763 118 aa7.62□□□□□ -1.19
CNOT1-203ENST00000562046 ATP2B2Q01814 1243 aa7.62□□□□□ -1.19
CNOT1-203ENST00000562046 ZNF468Q5VIY5 522 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-203ENST00000562046 PMEPA1Q969W9 287 aa7.62□□□□□ -1.19
CNOT1-203ENST00000562046 MRRFQ96E11 262 aaKnown RBP7.62□□□□□ -1.19
CNOT1-203ENST00000562046 PNMA5Q96PV4 448 aa7.62□□□□□ -1.19
CNOT1-203ENST00000562046 AVENQ9NQS1 362 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-203ENST00000562046 PARP2Q9UGN5 583 aa7.62□□□□□ -1.19
CNOT1-203ENST00000562046 KLF15Q9UIH9 416 aa7.62□□□□□ -1.19
CNOT1-203ENST00000562046 ZBTB42B2RXF5 422 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 KIF4AO95239 1232 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 POLR3DP05423 398 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-203ENST00000562046 MX2P20592 715 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 CES1P23141 567 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 IRS1P35568 1242 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 DAB2P98082 770 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 NFX1Q12986 1120 aaKnown RBP7.61□□□□□ -1.19
CNOT1-203ENST00000562046 MRPL58Q14197 206 aaKnown RBP7.61□□□□□ -1.19
CNOT1-203ENST00000562046 RNFT1Q5M7Z0 435 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 COL13A1Q5TAT6 717 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-203ENST00000562046 DHX32Q7L7V1 743 aaKnown RBP7.61□□□□□ -1.19
CNOT1-203ENST00000562046 TMC4Q7Z404 712 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 EPS8L3Q8TE67 593 aaKnown RBP7.61□□□□□ -1.19
CNOT1-203ENST00000562046 MDFIQ99750 246 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 KANSL3Q9P2N6 904 aa7.61□□□□□ -1.19
CNOT1-203ENST00000562046 E9PSI1 815 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 SIN3BO75182 1162 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 PSAPP07602 524 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 BMP4P12644 408 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 GNA15P30679 374 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 NRLP54845 237 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.6□□□□□ -1.19
CNOT1-203ENST00000562046 PEAR1Q5VY43 1037 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-203ENST00000562046 PI16Q6UXB8 463 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 SYT9Q86SS6 491 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 TRPM4Q8TD43 1214 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 FAM161BQ96MY7 647 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 NPHS2Q9NP85 383 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 PRR12Q9ULL5 1215 aa7.6□□□□□ -1.19
CNOT1-203ENST00000562046 GPLD1P80108 840 aa7.59□□□□□ -1.19
CNOT1-203ENST00000562046 KRT76Q01546 638 aa7.59□□□□□ -1.19
CNOT1-203ENST00000562046 PLAURQ03405 335 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms