RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZNF594Q96JF6 807 aaPredicted RBP11.8□□□□□ -0.52
SMG1-205ENST00000561947 JAKMIP1Q96N16 626 aaKnown RBP11.8□□□□□ -0.52
SMG1-205ENST00000561947 THRAP3Q9Y2W1 955 aaKnown RBP11.8□□□□□ -0.52
SMG1-205ENST00000561947 GOLGA6L3A6NEY3 463 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 KCNJ4P48050 445 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 MCTP1Q6DN14 999 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 ZBTB38Q8NAP3 1195 aaPredicted RBP11.79□□□□□ -0.52
SMG1-205ENST00000561947 SYTL4Q96C24 671 aaPredicted RBP11.79□□□□□ -0.52
SMG1-205ENST00000561947 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
SMG1-205ENST00000561947 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 LIMCH1Q9UPQ0 1083 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 NWD2Q9ULI1 1742 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 MYH3P11055 1940 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 SPEF2Q9C093 1822 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
SMG1-205ENST00000561947 ADAMTS2O95450 1211 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 BRD1O95696 1058 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 RUFY3Q7L099 469 aa11.79□□□□□ -0.52
SMG1-205ENST00000561947 CDHR2Q9BYE9 1310 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 SLC27A2O14975 620 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 CPA1P15085 419 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
SMG1-205ENST00000561947 HLFQ16534 295 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 ZNF589Q86UQ0 364 aaPredicted RBP11.78□□□□□ -0.52
SMG1-205ENST00000561947 NEUROD6Q96NK8 337 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 ARXQ96QS3 562 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 ZBTB1Q9Y2K1 713 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 CYP46A1Q9Y6A2 500 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 NDUFB9Q9Y6M9 179 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 PALLDQ8WX93 1383 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 KLHL40Q2TBA0 621 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 RNF20Q5VTR2 975 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 FAM89AQ96GI7 184 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 PDRG1Q9NUG6 133 aa11.78□□□□□ -0.52
SMG1-205ENST00000561947 TAF5LO75529 589 aa11.77□□□□□ -0.52
SMG1-205ENST00000561947 CSF1RP07333 972 aa11.77□□□□□ -0.52
SMG1-205ENST00000561947 TIMM10P62072 90 aa11.77□□□□□ -0.52
SMG1-205ENST00000561947 DDB1Q16531 1140 aa11.77□□□□□ -0.52
SMG1-205ENST00000561947 NLRP10Q86W26 655 aa11.77□□□□□ -0.52
SMG1-205ENST00000561947 PUS3Q9BZE2 481 aaKnown RBP11.77□□□□□ -0.52
SMG1-205ENST00000561947 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.52
SMG1-205ENST00000561947 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.53
SMG1-205ENST00000561947 KBTBD3Q8NAB2 608 aa11.77□□□□□ -0.53
SMG1-205ENST00000561947 HMG20BQ9P0W2 317 aa11.77□□□□□ -0.53
SMG1-205ENST00000561947 CEP126Q9P2H0 1117 aa11.77□□□□□ -0.53
SMG1-205ENST00000561947 BRPF3Q9ULD4 1205 aa11.77□□□□□ -0.53
SMG1-205ENST00000561947 CCDC9Q9Y3X0 531 aaKnown RBP11.77□□□□□ -0.53
SMG1-205ENST00000561947 A0A1B0GUL7 405 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 GPTP24298 496 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 PSMA5P28066 241 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
SMG1-205ENST00000561947 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 ISY1Q9ULR0 285 aaKnown RBP11.76□□□□□ -0.53
SMG1-205ENST00000561947 DDX49Q9Y6V7 483 aaKnown RBP11.76□□□□□ -0.53
SMG1-205ENST00000561947 SH3TC1Q8TE82 1336 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 RREB1Q92766 1687 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMG1-205ENST00000561947 ZSCAN31Q96LW9 406 aaPredicted RBP11.76□□□□□ -0.53
SMG1-205ENST00000561947 PAG1Q9NWQ8 432 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 CICQ96RK0 1608 aaPredicted RBP11.76□□□□□ -0.53
SMG1-205ENST00000561947 SPATA31A5Q5VU36 1347 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 SPATA31A7Q8IWB4 1347 aa11.76□□□□□ -0.53
SMG1-205ENST00000561947 ERVV-1B6SEH8 477 aa11.75□□□□□ -0.53
SMG1-205ENST00000561947 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
SMG1-205ENST00000561947 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
SMG1-205ENST00000561947 MCMDC2Q4G0Z9 681 aa11.75□□□□□ -0.53
SMG1-205ENST00000561947 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
SMG1-205ENST00000561947 SH2B1Q9NRF2 756 aaPredicted RBP11.75□□□□□ -0.53
SMG1-205ENST00000561947 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.75□□□□□ -0.53
SMG1-205ENST00000561947 GOLIM4O00461 696 aa11.75□□□□□ -0.53
SMG1-205ENST00000561947 LARGE1O95461 756 aa11.75□□□□□ -0.53
SMG1-205ENST00000561947 TAF7LQ5H9L4 462 aa11.75□□□□□ -0.53
SMG1-205ENST00000561947 FOXD4L5Q5VV16 416 aaPredicted RBP11.75□□□□□ -0.53
SMG1-205ENST00000561947 FOXD4L4Q8WXT5 416 aaPredicted RBP11.75□□□□□ -0.53
SMG1-205ENST00000561947 AKAP2Q9Y2D5 859 aa11.75□□□□□ -0.53
SMG1-205ENST00000561947 SLIT2O94813 1529 aa11.75□□□□□ -0.53
SMG1-205ENST00000561947 WDR33Q9C0J8 1336 aaKnown RBP11.75□□□□□ -0.53
SMG1-205ENST00000561947 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 CCDC85AQ96PX6 553 aaPredicted RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 RIC1Q4ADV7 1423 aa11.74□□□□□ -0.53
SMG1-205ENST00000561947 NUTM2BA6NNL0 878 aaPredicted RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 NUTM2EB1AL46 878 aaPredicted RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 PRPF40AO75400 957 aaKnown RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 CHGBP05060 677 aa11.74□□□□□ -0.53
SMG1-205ENST00000561947 CCDC129Q6ZRS4 1044 aa11.74□□□□□ -0.53
SMG1-205ENST00000561947 NUTM2AQ8IVF1 878 aaPredicted RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
SMG1-205ENST00000561947 MARCH10Q8NA82 808 aaPredicted RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 SEC62Q99442 399 aaKnown RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
SMG1-205ENST00000561947 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMG1-205ENST00000561947 CTSWP56202 376 aa11.73□□□□□ -0.53
SMG1-205ENST00000561947 BLOC1S2Q6QNY1 142 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms