RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 EGFRP00533 1210 aa4.78□□□□□ -1.64
CHD9-204ENST00000561869 NFKB1P19838 968 aa4.78□□□□□ -1.64
CHD9-204ENST00000561869 BRD2P25440 801 aaKnown RBP4.78□□□□□ -1.64
CHD9-204ENST00000561869 ADH7P40394 386 aa4.78□□□□□ -1.64
CHD9-204ENST00000561869 NEUROD1Q13562 356 aa4.78□□□□□ -1.64
CHD9-204ENST00000561869 C20orf204Q6ZNR8 217 aa4.78□□□□□ -1.64
CHD9-204ENST00000561869 NOP53Q9NZM5 478 aaKnown RBP4.78□□□□□ -1.64
CHD9-204ENST00000561869 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.78□□□□□ -1.64
CHD9-204ENST00000561869 PIK3R2O00459 728 aa4.77□□□□□ -1.65
CHD9-204ENST00000561869 MAP3K6O95382 1288 aa4.77□□□□□ -1.65
CHD9-204ENST00000561869 ALBP02768 609 aa4.77□□□□□ -1.65
CHD9-204ENST00000561869 EPB42P16452 691 aa4.77□□□□□ -1.65
CHD9-204ENST00000561869 ALAS2P22557 587 aa4.77□□□□□ -1.65
CHD9-204ENST00000561869 TARSP26639 723 aaKnown RBP4.77□□□□□ -1.65
CHD9-204ENST00000561869 MICALL1Q8N3F8 863 aa4.77□□□□□ -1.65
CHD9-204ENST00000561869 KRTAP4-8Q9BYQ9 185 aa4.77□□□□□ -1.65
CHD9-204ENST00000561869 ZBTB42B2RXF5 422 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 SASH3O75995 380 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 C8orf86Q6ZUL3 223 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 ILDR2Q71H61 639 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 RGL4Q8IZJ4 473 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 SEMA6BQ9H3T3 888 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 PRDM6Q9NQX0 595 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 DNAJB12Q9NXW2 375 aaKnown RBP4.76□□□□□ -1.65
CHD9-204ENST00000561869 STIM2Q9P246 746 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 NAGPAQ9UK23 515 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 SLC6A14Q9UN76 642 aa4.76□□□□□ -1.65
CHD9-204ENST00000561869 FAM229AH3BQW9 127 aa4.75□□□□□ -1.65
CHD9-204ENST00000561869 M0R082 166 aa4.75□□□□□ -1.65
CHD9-204ENST00000561869 XYLBO75191 536 aa4.75□□□□□ -1.65
CHD9-204ENST00000561869 TRIP4Q15650 581 aaPredicted RBP4.75□□□□□ -1.65
CHD9-204ENST00000561869 FOXD4L6Q3SYB3 417 aaPredicted RBP4.75□□□□□ -1.65
CHD9-204ENST00000561869 FOXD4L3Q6VB84 417 aaPredicted RBP4.75□□□□□ -1.65
CHD9-204ENST00000561869 KRT25Q7Z3Z0 450 aa4.75□□□□□ -1.65
CHD9-204ENST00000561869 CMTR1Q8N1G2 835 aaKnown RBP4.75□□□□□ -1.65
CHD9-204ENST00000561869 ZNF417Q8TAU3 575 aa4.75□□□□□ -1.65
CHD9-204ENST00000561869 PNMA5Q96PV4 448 aa4.75□□□□□ -1.65
CHD9-204ENST00000561869 ZNF587Q96SQ5 575 aaPredicted RBP4.75□□□□□ -1.65
CHD9-204ENST00000561869 UBE2OQ9C0C9 1292 aaKnown RBP4.75□□□□□ -1.65
CHD9-204ENST00000561869 SPATA31C1P0DKV0 1188 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 NID1P14543 1247 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 ZAP70P43403 619 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 GATA4P43694 442 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 RSPO4Q2I0M5 234 aaPredicted RBP4.74□□□□□ -1.65
CHD9-204ENST00000561869 DHX32Q7L7V1 743 aaKnown RBP4.74□□□□□ -1.65
CHD9-204ENST00000561869 TRPM4Q8TD43 1214 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 HELQQ8TDG4 1101 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 ARID3AQ99856 593 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 IGFLR1Q9H665 355 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 TLR7Q9NYK1 1049 aaKnown RBP4.74□□□□□ -1.65
CHD9-204ENST00000561869 USTQ9Y2C2 406 aa4.74□□□□□ -1.65
CHD9-204ENST00000561869 MMP20O60882 483 aa4.73□□□□□ -1.65
CHD9-204ENST00000561869 RARAP10276 462 aa4.73□□□□□ -1.65
CHD9-204ENST00000561869 HOXD8P13378 290 aaPredicted RBP4.73□□□□□ -1.65
CHD9-204ENST00000561869 GPLD1P80108 840 aa4.73□□□□□ -1.65
CHD9-204ENST00000561869 TBC1D8BQ0IIM8 1120 aa4.73□□□□□ -1.65
CHD9-204ENST00000561869 GPR152Q8TDT2 470 aa4.73□□□□□ -1.65
CHD9-204ENST00000561869 GTF3C2Q8WUA4 911 aaPredicted RBP4.73□□□□□ -1.65
CHD9-204ENST00000561869 TPSG1Q9NRR2 321 aa4.73□□□□□ -1.65
CHD9-204ENST00000561869 NPR3P17342 541 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 AFF1P51825 1210 aaKnown RBP4.72□□□□□ -1.65
CHD9-204ENST00000561869 NRLP54845 237 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 MLLT1Q03111 559 aaPredicted RBP4.72□□□□□ -1.65
CHD9-204ENST00000561869 PLAURQ03405 335 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 MTMR3Q13615 1198 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 GRIK5Q16478 980 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 NKAPLQ5M9Q1 402 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 PERM1Q5SV97 790 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 PSAPL1Q6NUJ1 521 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 NLRP13Q86W25 1043 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 ATCAYQ86WG3 371 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 ABTB2Q8N961 1025 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 PIK3R5Q8WYR1 880 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 LPIN3Q9BQK8 851 aa4.72□□□□□ -1.65
CHD9-204ENST00000561869 UBAP1LF5GYI3 381 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 LILRB5O75023 590 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 CPB1P15086 417 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 PCSK7Q16549 785 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 ZMYM1Q5SVZ6 1142 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 FAM35AQ86V20 835 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 NUDT8Q8WV74 236 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 TTC9Q92623 222 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 FAM13BQ9NYF5 915 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 FRRS1LQ9P0K9 344 aa4.71□□□□□ -1.66
CHD9-204ENST00000561869 LOC102724428A0A0B4J2F2 783 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.7□□□□□ -1.66
CHD9-204ENST00000561869 MPSTP25325 297 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 SOX18P35713 384 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 EIF1AXP47813 144 aaKnown RBP4.7□□□□□ -1.66
CHD9-204ENST00000561869 SIK1P57059 783 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 GRIK4Q16099 956 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 ECM1Q16610 540 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 COL13A1Q5TAT6 717 aaPredicted RBP4.7□□□□□ -1.66
CHD9-204ENST00000561869 HFE2Q6ZVN8 426 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 RETREG2Q8NC44 543 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 OR13H1Q8NG92 308 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 NUDT16Q96DE0 195 aaKnown RBP4.7□□□□□ -1.66
CHD9-204ENST00000561869 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
CHD9-204ENST00000561869 JPH1Q9HDC5 661 aaPredicted RBP4.7□□□□□ -1.66
CHD9-204ENST00000561869 J3QW42 95 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms