RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 UBN2Q6ZU65 1347 aa17.38■□□□□ 0.37
SPG7-203ENST00000561702 ERC1Q8IUD2 1116 aa17.38■□□□□ 0.37
SPG7-203ENST00000561702 FAM43AQ8N2R8 423 aa17.38■□□□□ 0.37
SPG7-203ENST00000561702 FAM89AQ96GI7 184 aa17.38■□□□□ 0.37
SPG7-203ENST00000561702 GZF1Q9H116 711 aaPredicted RBP17.38■□□□□ 0.37
SPG7-203ENST00000561702 SASH1O94885 1247 aa17.37■□□□□ 0.37
SPG7-203ENST00000561702 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
SPG7-203ENST00000561702 PTPN12Q05209 780 aaKnown RBP17.37■□□□□ 0.37
SPG7-203ENST00000561702 G3BP1Q13283 466 aaKnown RBP eCLIP17.37■□□□□ 0.377e-7■■■■□ 23.9
SPG7-203ENST00000561702 RC3H1Q5TC82 1133 aaKnown RBP17.37■□□□□ 0.37
SPG7-203ENST00000561702 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
SPG7-203ENST00000561702 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
SPG7-203ENST00000561702 SIL1Q9H173 461 aa17.37■□□□□ 0.37
SPG7-203ENST00000561702 BAG4O95429 457 aaKnown RBP17.37■□□□□ 0.37
SPG7-203ENST00000561702 SSFA2P28290 1259 aa17.37■□□□□ 0.37
SPG7-203ENST00000561702 SYNE4Q8N205 404 aa17.37■□□□□ 0.37
SPG7-203ENST00000561702 PLA2G12BQ9BX93 195 aa17.37■□□□□ 0.37
SPG7-203ENST00000561702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.37■□□□□ 0.37
SPG7-203ENST00000561702 CDHR2Q9BYE9 1310 aa17.36■□□□□ 0.37
SPG7-203ENST00000561702 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
SPG7-203ENST00000561702 C4BP0C0L5 1744 aa17.36■□□□□ 0.37
SPG7-203ENST00000561702 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.37
SPG7-203ENST00000561702 TTC41PQ6P2S7 1318 aa17.36■□□□□ 0.37
SPG7-203ENST00000561702 USP42Q9H9J4 1324 aaKnown RBP17.36■□□□□ 0.37
SPG7-203ENST00000561702 KLHL40Q2TBA0 621 aa17.35■□□□□ 0.37
SPG7-203ENST00000561702 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
SPG7-203ENST00000561702 NEK4P51957 841 aa17.35■□□□□ 0.37
SPG7-203ENST00000561702 SMIM5Q71RC9 77 aa17.35■□□□□ 0.37
SPG7-203ENST00000561702 CNTROBQ8N137 903 aa17.35■□□□□ 0.37
SPG7-203ENST00000561702 ANO2Q9NQ90 1003 aa17.35■□□□□ 0.37
SPG7-203ENST00000561702 RPS6KA4O75676 772 aa17.34■□□□□ 0.37
SPG7-203ENST00000561702 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
SPG7-203ENST00000561702 TRIM37O94972 964 aa17.33■□□□□ 0.37
SPG7-203ENST00000561702 CLASRPQ8N2M8 674 aaKnown RBP17.33■□□□□ 0.37
SPG7-203ENST00000561702 PI4K2BQ8TCG2 481 aa17.33■□□□□ 0.37
SPG7-203ENST00000561702 TRMT112Q9UI30 125 aaKnown RBP17.33■□□□□ 0.37
SPG7-203ENST00000561702 SUSD4Q5VX71 490 aa17.33■□□□□ 0.36
SPG7-203ENST00000561702 GRPEL1Q9HAV7 217 aa17.33■□□□□ 0.36
SPG7-203ENST00000561702 C4AP0C0L4 1744 aa17.32■□□□□ 0.36
SPG7-203ENST00000561702 DDX60Q8IY21 1712 aaKnown RBP17.32■□□□□ 0.36
SPG7-203ENST00000561702 GNPATO15228 680 aa17.32■□□□□ 0.36
SPG7-203ENST00000561702 GLRX3O76003 335 aaKnown RBP17.32■□□□□ 0.36
SPG7-203ENST00000561702 CSF1RP07333 972 aa17.32■□□□□ 0.36
SPG7-203ENST00000561702 GPATCH3Q96I76 525 aa17.32■□□□□ 0.36
SPG7-203ENST00000561702 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
SPG7-203ENST00000561702 LAMB2P55268 1798 aa17.32■□□□□ 0.36
SPG7-203ENST00000561702 IRS4O14654 1257 aaPredicted RBP17.31■□□□□ 0.36
SPG7-203ENST00000561702 RXRBP28702 533 aa17.31■□□□□ 0.36
SPG7-203ENST00000561702 CUL4AQ13619 759 aa17.31■□□□□ 0.36
SPG7-203ENST00000561702 AMIGO3Q86WK7 504 aa17.31■□□□□ 0.36
SPG7-203ENST00000561702 FBXO41Q8TF61 875 aa17.31■□□□□ 0.36
SPG7-203ENST00000561702 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
SPG7-203ENST00000561702 PARP10Q53GL7 1025 aa17.31■□□□□ 0.36
SPG7-203ENST00000561702 AACSQ86V21 672 aa17.31■□□□□ 0.36
SPG7-203ENST00000561702 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
SPG7-203ENST00000561702 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
SPG7-203ENST00000561702 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
SPG7-203ENST00000561702 HSPA4P34932 840 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 CLEC4GQ6UXB4 293 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
SPG7-203ENST00000561702 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 BCL2L12Q9HB09 334 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 DDX49Q9Y6V7 483 aaKnown RBP17.3■□□□□ 0.36
SPG7-203ENST00000561702 UBR3Q6ZT12 1888 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 CTSWP56202 376 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 TFCP2Q12800 502 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
SPG7-203ENST00000561702 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
SPG7-203ENST00000561702 UTP14AQ9BVJ6 771 aaKnown RBP17.3■□□□□ 0.36
SPG7-203ENST00000561702 RTCBQ9Y3I0 505 aaKnown RBP17.3■□□□□ 0.36
SPG7-203ENST00000561702 FAM177BA6PVY3 158 aa17.29■□□□□ 0.36
SPG7-203ENST00000561702 SGSM2O43147 1006 aa17.29■□□□□ 0.36
SPG7-203ENST00000561702 PDE8AO60658 829 aa17.29■□□□□ 0.36
SPG7-203ENST00000561702 IFIT2P09913 472 aaKnown RBP17.29■□□□□ 0.36
SPG7-203ENST00000561702 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
SPG7-203ENST00000561702 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
SPG7-203ENST00000561702 SH3TC1Q8TE82 1336 aa17.29■□□□□ 0.36
SPG7-203ENST00000561702 RAD50Q92878 1312 aa17.29■□□□□ 0.36
SPG7-203ENST00000561702 RGL2O15211 777 aa17.28■□□□□ 0.36
SPG7-203ENST00000561702 NTSR2O95665 410 aa17.28■□□□□ 0.36
SPG7-203ENST00000561702 CCDC57Q2TAC2 916 aa17.28■□□□□ 0.36
SPG7-203ENST00000561702 CCDC8Q9H0W5 538 aaPredicted RBP17.28■□□□□ 0.36
SPG7-203ENST00000561702 RTN4Q9NQC3 1192 aaKnown RBP17.28■□□□□ 0.36
SPG7-203ENST00000561702 SRP68Q9UHB9 627 aaKnown RBP17.28■□□□□ 0.36
SPG7-203ENST00000561702 CASZ1Q86V15 1759 aa17.28■□□□□ 0.36
SPG7-203ENST00000561702 EYA2O00167 538 aa17.28■□□□□ 0.36
SPG7-203ENST00000561702 LRRC24Q50LG9 513 aa17.28■□□□□ 0.36
SPG7-203ENST00000561702 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
SPG7-203ENST00000561702 KIAA1211Q6ZU35 1233 aa17.28■□□□□ 0.36
SPG7-203ENST00000561702 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
SPG7-203ENST00000561702 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.36
SPG7-203ENST00000561702 SLC27A3Q5K4L6 730 aa17.27■□□□□ 0.36
SPG7-203ENST00000561702 MCTP1Q6DN14 999 aa17.27■□□□□ 0.36
SPG7-203ENST00000561702 ZGPATQ8N5A5 531 aaKnown RBP17.27■□□□□ 0.36
SPG7-203ENST00000561702 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
SPG7-203ENST00000561702 PUS3Q9BZE2 481 aaKnown RBP17.27■□□□□ 0.36
SPG7-203ENST00000561702 GREM2Q9H772 168 aa17.27■□□□□ 0.36
SPG7-203ENST00000561702 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
SPG7-203ENST00000561702 CIAO1O76071 339 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms