RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CALD1Q05682 793 aaKnown RBP8.94□□□□□ -0.98
SPG11-224ENST00000561268 TCIRG1Q13488 830 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 NEUROD2Q15784 382 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 HDGFL1Q5TGJ6 251 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 DUSP27Q5VZP5 1158 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 CC2D2BQ6DHV5 1058 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 COPS6Q7L5N1 327 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 PPP1R42Q7Z4L9 355 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 PLBD2Q8NHP8 589 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 DBF4Q9UBU7 674 aaPredicted RBP8.94□□□□□ -0.98
SPG11-224ENST00000561268 METRNQ9UJH8 293 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 IL16Q14005 1332 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 ZNF609O15014 1411 aa8.94□□□□□ -0.98
SPG11-224ENST00000561268 SPDYE4A6NLX3 237 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 ANP32CO43423 234 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 APLP1P51693 650 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 TRIM28Q13263 835 aaKnown RBP8.93□□□□□ -0.98
SPG11-224ENST00000561268 GRIPAP1Q4V328 841 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 OLFM4Q6UX06 510 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 RTKN2Q8IZC4 609 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 NGEFQ8N5V2 710 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 ABCC4O15439 1325 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 ZNF541Q9H0D2 1346 aa8.93□□□□□ -0.98
SPG11-224ENST00000561268 SH3TC1Q8TE82 1336 aa8.92□□□□□ -0.98
SPG11-224ENST00000561268 FZD9O00144 591 aa8.92□□□□□ -0.98
SPG11-224ENST00000561268 VEGFAP15692 232 aaPredicted RBP8.92□□□□□ -0.98
SPG11-224ENST00000561268 IARSP41252 1262 aaKnown RBP8.92□□□□□ -0.98
SPG11-224ENST00000561268 SLC51AQ86UW1 340 aa8.92□□□□□ -0.98
SPG11-224ENST00000561268 MS4A3Q96HJ5 214 aa8.92□□□□□ -0.98
SPG11-224ENST00000561268 UTP14AQ9BVJ6 771 aaKnown RBP8.92□□□□□ -0.98
SPG11-224ENST00000561268 RTFDC1Q9BY42 306 aaPredicted RBP8.92□□□□□ -0.98
SPG11-224ENST00000561268 HYPKQ9NX55 129 aa8.92□□□□□ -0.98
SPG11-224ENST00000561268 MYH13Q9UKX3 1938 aa8.92□□□□□ -0.98
SPG11-224ENST00000561268 FAM177BA6PVY3 158 aa8.91□□□□□ -0.98
SPG11-224ENST00000561268 PPEF1O14829 653 aaPredicted RBP8.91□□□□□ -0.98
SPG11-224ENST00000561268 WWC1Q8IX03 1113 aa8.91□□□□□ -0.98
SPG11-224ENST00000561268 DNAJC5GQ8N7S2 189 aa8.91□□□□□ -0.98
SPG11-224ENST00000561268 SMC1BQ8NDV3 1235 aa8.91□□□□□ -0.98
SPG11-224ENST00000561268 RPGRQ92834 1020 aaKnown RBP8.91□□□□□ -0.98
SPG11-224ENST00000561268 RRAGCQ9HB90 399 aa8.91□□□□□ -0.98
SPG11-224ENST00000561268 GTF2E1P29083 439 aaPredicted RBP8.9□□□□□ -0.98
SPG11-224ENST00000561268 SF3B3Q15393 1217 aaKnown RBP8.9□□□□□ -0.98
SPG11-224ENST00000561268 DPY19L2Q6NUT2 758 aa8.9□□□□□ -0.98
SPG11-224ENST00000561268 ANKRD13DQ6ZTN6 518 aa8.9□□□□□ -0.98
SPG11-224ENST00000561268 C8orf58Q8NAV2 365 aa8.9□□□□□ -0.98
SPG11-224ENST00000561268 NECTIN2Q92692 538 aa8.9□□□□□ -0.98
SPG11-224ENST00000561268 RBM17Q96I25 401 aaKnown RBP8.9□□□□□ -0.98
SPG11-224ENST00000561268 NLRP3Q96P20 1036 aa8.9□□□□□ -0.98
SPG11-224ENST00000561268 VPS33BQ9H267 617 aa8.9□□□□□ -0.98
SPG11-224ENST00000561268 ZNF277Q9NRM2 450 aaPredicted RBP8.9□□□□□ -0.98
SPG11-224ENST00000561268 ATP6V0A2Q9Y487 856 aa8.9□□□□□ -0.98
SPG11-224ENST00000561268 RTL9Q8NET4 1388 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 ZNF521Q96K83 1311 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 CDHR2Q9BYE9 1310 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 FANCIQ9NVI1 1328 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 DDNO94850 711 aaPredicted RBP8.89□□□□□ -0.99
SPG11-224ENST00000561268 GRAPQ13588 217 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 TMC4Q7Z404 712 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 SYNE4Q8N205 404 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 TSPYL6Q8N831 410 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 JMYQ8N9B5 988 aa8.89□□□□□ -0.99
SPG11-224ENST00000561268 GRAPLQ8TC17 118 aaPredicted RBP8.89□□□□□ -0.99
SPG11-224ENST00000561268 LAS1LQ9Y4W2 734 aaKnown RBP8.89□□□□□ -0.99
SPG11-224ENST00000561268 PASKQ96RG2 1323 aa8.88□□□□□ -0.99
SPG11-224ENST00000561268 IQCA1LA6NCM1 817 aa8.88□□□□□ -0.99
SPG11-224ENST00000561268 MNX1P50219 401 aaPredicted RBP8.88□□□□□ -0.99
SPG11-224ENST00000561268 AIMP1Q12904 312 aaKnown RBP8.88□□□□□ -0.99
SPG11-224ENST00000561268 ASTLQ6HA08 431 aaPredicted RBP8.88□□□□□ -0.99
SPG11-224ENST00000561268 C16orf71Q8IYS4 520 aaPredicted RBP8.88□□□□□ -0.99
SPG11-224ENST00000561268 GPC2Q8N158 579 aa8.88□□□□□ -0.99
SPG11-224ENST00000561268 CHMP4AQ9BY43 222 aa8.88□□□□□ -0.99
SPG11-224ENST00000561268 TAF1DQ9H5J8 278 aaPredicted RBP8.88□□□□□ -0.99
SPG11-224ENST00000561268 PHAXQ9H814 394 aaKnown RBP8.88□□□□□ -0.99
SPG11-224ENST00000561268 MRS2Q9HD23 443 aa8.88□□□□□ -0.99
SPG11-224ENST00000561268 TRMT112Q9UI30 125 aaKnown RBP8.88□□□□□ -0.99
SPG11-224ENST00000561268 ATMINO43313 823 aaPredicted RBP8.87□□□□□ -0.99
SPG11-224ENST00000561268 BBOX1O75936 387 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
SPG11-224ENST00000561268 POTEJP0CG39 1038 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 HCLS1P14317 486 aaPredicted RBP8.87□□□□□ -0.99
SPG11-224ENST00000561268 SCNN1DP51172 638 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 GOLGA2Q08379 1002 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 KIAA2012Q0VF49 1180 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 CCDC30Q5VVM6 783 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 LDHDQ86WU2 507 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 SP8Q8IXZ3 490 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 ZBTB38Q8NAP3 1195 aaPredicted RBP8.87□□□□□ -0.99
SPG11-224ENST00000561268 CCDC191Q8NCU4 936 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 SLC39A7Q92504 469 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 TSR2Q969E8 191 aaKnown RBP8.87□□□□□ -0.99
SPG11-224ENST00000561268 KLRG1Q96E93 195 aa8.87□□□□□ -0.99
SPG11-224ENST00000561268 METTL22Q9BUU2 404 aaPredicted RBP8.87□□□□□ -0.99
SPG11-224ENST00000561268 WDR63Q8IWG1 891 aa8.86□□□□□ -0.99
SPG11-224ENST00000561268 PAPPA2Q9BXP8 1791 aa8.86□□□□□ -0.99
SPG11-224ENST00000561268 PCNTO95613 3336 aa8.85□□□□□ -0.99
SPG11-224ENST00000561268 ATP5J2-PTCD1G3V325 749 aa8.85□□□□□ -0.99
SPG11-224ENST00000561268 IGKV5-2P06315 115 aa8.85□□□□□ -0.99
SPG11-224ENST00000561268 C7P10643 843 aa8.85□□□□□ -0.99
SPG11-224ENST00000561268 TWISTNBQ3B726 338 aaPredicted RBP8.85□□□□□ -0.99
SPG11-224ENST00000561268 DDX46Q7L014 1031 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms