RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 CASP7P55210 303 aa17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 JARID2Q92833 1246 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 INTS4Q96HW7 963 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 TLR7Q9NYK1 1049 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 SNX14Q9Y5W7 946 aa17.48■□□□□ 0.39
RABGGTA-212ENST00000559974 COL5A3P25940 1745 aaPredicted RBP17.47■□□□□ 0.39
RABGGTA-212ENST00000559974 TAF1LQ8IZX4 1826 aa17.47■□□□□ 0.39
RABGGTA-212ENST00000559974 HIP1O00291 1037 aa17.47■□□□□ 0.39
RABGGTA-212ENST00000559974 ATP6V1AP38606 617 aa17.47■□□□□ 0.39
RABGGTA-212ENST00000559974 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
RABGGTA-212ENST00000559974 DEFB132Q7Z7B7 95 aa17.47■□□□□ 0.39
RABGGTA-212ENST00000559974 LINC00116Q8NCU8 138 aa17.46■□□□□ 0.39
RABGGTA-212ENST00000559974 A1BGP04217 495 aa17.46■□□□□ 0.39
RABGGTA-212ENST00000559974 EN1Q05925 392 aaPredicted RBP17.45■□□□□ 0.38
RABGGTA-212ENST00000559974 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
RABGGTA-212ENST00000559974 NOL8Q76FK4 1167 aaKnown RBP17.45■□□□□ 0.38
RABGGTA-212ENST00000559974 ZDHHC9Q9Y397 364 aa17.45■□□□□ 0.38
RABGGTA-212ENST00000559974 H7C1W4 665 aa17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 MCTP1Q6DN14 999 aa17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 AMIGO3Q86WK7 504 aa17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 BOLA2Q9H3K6 86 aa17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 CWC25Q9NXE8 425 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 CCNL1Q9UK58 526 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-212ENST00000559974 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-212ENST00000559974 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-212ENST00000559974 PTH1RQ03431 593 aa17.43■□□□□ 0.38
RABGGTA-212ENST00000559974 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
RABGGTA-212ENST00000559974 TTC14Q96N46 770 aa17.43■□□□□ 0.38
RABGGTA-212ENST00000559974 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
RABGGTA-212ENST00000559974 ZNF831Q5JPB2 1677 aa17.43■□□□□ 0.38
RABGGTA-212ENST00000559974 CCDC171Q6TFL3 1326 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 TFCP2Q12800 502 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 EZH2Q15910 746 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 KLHL40Q2TBA0 621 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 SNRKQ9NRH2 765 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 FOXO4P98177 505 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 NMIQ13287 307 aaPredicted RBP17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 TXNRD1Q16881 649 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 LMBR1LQ6UX01 489 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 KCNB2Q92953 911 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 FSD1Q9BTV5 496 aa17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 DBNLQ9UJU6 430 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-212ENST00000559974 VSIG10Q8N0Z9 540 aa17.41■□□□□ 0.38
RABGGTA-212ENST00000559974 CCDC191Q8NCU4 936 aa17.41■□□□□ 0.38
RABGGTA-212ENST00000559974 FAM227BQ96M60 508 aa17.41■□□□□ 0.38
RABGGTA-212ENST00000559974 ZBTB1Q9Y2K1 713 aa17.41■□□□□ 0.38
RABGGTA-212ENST00000559974 XRCC6P12956 609 aaKnown RBP eCLIP17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 ATP5JP18859 108 aa17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 INTS5Q6P9B9 1019 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 ZBTB3Q9H5J0 574 aa17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 DDX49Q9Y6V7 483 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 C4BP0C0L5 1744 aa17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 BRD1O95696 1058 aa17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 MRE11P49959 708 aa17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 PRPF40BQ6NWY9 871 aaKnown RBP17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 ARXQ96QS3 562 aa17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 LMBRD1Q9NUN5 540 aa17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 RREB1Q92766 1687 aa17.4■□□□□ 0.38
RABGGTA-212ENST00000559974 PLSCR1O15162 318 aa17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 CASTP20810 708 aaKnown RBP17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 AK2P54819 239 aa17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 NECTIN1Q15223 517 aa17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 UPF1Q92900 1129 aaKnown RBP eCLIP17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 CAMKK2Q96RR4 588 aa17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 TM6SF1Q9BZW5 370 aa17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 CHMP3Q9Y3E7 222 aa17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 MED23Q9ULK4 1368 aa17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 MAP4K1Q92918 833 aa17.39■□□□□ 0.37
RABGGTA-212ENST00000559974 RGPD3A6NKT7 1758 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-212ENST00000559974 RGPD4Q7Z3J3 1758 aa17.38■□□□□ 0.37
RABGGTA-212ENST00000559974 A0A0D9SFI3 127 aa17.38■□□□□ 0.37
RABGGTA-212ENST00000559974 LIMCH1Q9UPQ0 1083 aa17.38■□□□□ 0.37
RABGGTA-212ENST00000559974 ZNF330Q9Y3S2 320 aaPredicted RBP17.38■□□□□ 0.37
RABGGTA-212ENST00000559974 RBM8AQ9Y5S9 174 aaKnown RBP17.38■□□□□ 0.37
RABGGTA-212ENST00000559974 RFX7Q2KHR2 1363 aa17.38■□□□□ 0.37
RABGGTA-212ENST00000559974 ZKSCAN1P17029 563 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 TEX13AQ9BXU3 409 aaPredicted RBP17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 RUFY3Q7L099 469 aa17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 GRPEL1Q9HAV7 217 aa17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 ZSWIM6Q9HCJ5 1215 aa17.37■□□□□ 0.37
RABGGTA-212ENST00000559974 TCHHQ07283 1943 aa17.36■□□□□ 0.37
RABGGTA-212ENST00000559974 KCNJ4P48050 445 aa17.36■□□□□ 0.37
RABGGTA-212ENST00000559974 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
RABGGTA-212ENST00000559974 CREB3L3Q68CJ9 461 aa17.36■□□□□ 0.37
RABGGTA-212ENST00000559974 ATG9AQ7Z3C6 839 aa17.36■□□□□ 0.37
RABGGTA-212ENST00000559974 ISCA1Q9BUE6 129 aa17.36■□□□□ 0.37
RABGGTA-212ENST00000559974 CYP46A1Q9Y6A2 500 aa17.36■□□□□ 0.37
RABGGTA-212ENST00000559974 STARD3NLO95772 234 aa17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 EDC3Q96F86 508 aaKnown RBP17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 PDRG1Q9NUG6 133 aa17.35■□□□□ 0.37
RABGGTA-212ENST00000559974 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms