RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
PPP1R3E-204ENST00000559942 CD99L2Q8TCZ2 262 aa13.01□□□□□ -0.33
PPP1R3E-204ENST00000559942 SIN3AQ96ST3 1273 aa13.01□□□□□ -0.33
PPP1R3E-204ENST00000559942 VPS33BQ9H267 617 aa13.01□□□□□ -0.33
PPP1R3E-204ENST00000559942 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
PPP1R3E-204ENST00000559942 KIF20BQ96Q89 1820 aa13□□□□□ -0.33
PPP1R3E-204ENST00000559942 RAD17O75943 681 aa13□□□□□ -0.33
PPP1R3E-204ENST00000559942 NEUROD1Q13562 356 aa13□□□□□ -0.33
PPP1R3E-204ENST00000559942 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
PPP1R3E-204ENST00000559942 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
PPP1R3E-204ENST00000559942 NCOR1O75376 2440 aa13□□□□□ -0.33
PPP1R3E-204ENST00000559942 MUC3AQ02505 3323 aa12.99□□□□□ -0.33
PPP1R3E-204ENST00000559942 STARD3NLO95772 234 aa12.99□□□□□ -0.33
PPP1R3E-204ENST00000559942 LRIT3Q3SXY7 679 aa12.99□□□□□ -0.33
PPP1R3E-204ENST00000559942 C1orf141Q5JVX7 400 aa12.99□□□□□ -0.33
PPP1R3E-204ENST00000559942 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
PPP1R3E-204ENST00000559942 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
PPP1R3E-204ENST00000559942 ZNF609O15014 1411 aa12.98□□□□□ -0.33
PPP1R3E-204ENST00000559942 UBE2Q2LH0YL09 131 aa12.98□□□□□ -0.33
PPP1R3E-204ENST00000559942 CAMTA2O94983 1202 aa12.98□□□□□ -0.33
PPP1R3E-204ENST00000559942 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
PPP1R3E-204ENST00000559942 AMOTQ4VCS5 1084 aa12.98□□□□□ -0.33
PPP1R3E-204ENST00000559942 MOB2Q70IA6 237 aa12.98□□□□□ -0.33
PPP1R3E-204ENST00000559942 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
PPP1R3E-204ENST00000559942 PRAMEF22A3QJZ6 481 aa12.97□□□□□ -0.33
PPP1R3E-204ENST00000559942 EGFRP00533 1210 aa12.97□□□□□ -0.33
PPP1R3E-204ENST00000559942 BMP8BP34820 402 aa12.97□□□□□ -0.33
PPP1R3E-204ENST00000559942 DPF2Q92785 391 aa12.97□□□□□ -0.33
PPP1R3E-204ENST00000559942 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
PPP1R3E-204ENST00000559942 TCERG1O14776 1098 aaKnown RBP12.96□□□□□ -0.33
PPP1R3E-204ENST00000559942 BCAMP50895 628 aa12.96□□□□□ -0.33
PPP1R3E-204ENST00000559942 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
PPP1R3E-204ENST00000559942 PTCH2Q9Y6C5 1203 aa12.96□□□□□ -0.33
PPP1R3E-204ENST00000559942 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
PPP1R3E-204ENST00000559942 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
PPP1R3E-204ENST00000559942 EVI5O60447 810 aa12.95□□□□□ -0.34
PPP1R3E-204ENST00000559942 IL6STP40189 918 aaPredicted RBP12.95□□□□□ -0.34
PPP1R3E-204ENST00000559942 SHISA4Q96DD7 197 aa12.95□□□□□ -0.34
PPP1R3E-204ENST00000559942 GGA3Q9NZ52 723 aa12.95□□□□□ -0.34
PPP1R3E-204ENST00000559942 SP3Q02447 781 aa12.94□□□□□ -0.34
PPP1R3E-204ENST00000559942 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
PPP1R3E-204ENST00000559942 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
PPP1R3E-204ENST00000559942 SLC52A2Q9HAB3 445 aa12.94□□□□□ -0.34
PPP1R3E-204ENST00000559942 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
PPP1R3E-204ENST00000559942 IRS2Q9Y4H2 1338 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 FAM177BA6PVY3 158 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 GTF2E1P29083 439 aaPredicted RBP12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 CAP1Q01518 475 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 CRY2Q49AN0 593 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 UBE2Q1Q7Z7E8 422 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 SLC51AQ86UW1 340 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 GDF15Q99988 308 aa12.93□□□□□ -0.34
PPP1R3E-204ENST00000559942 INHBEP58166 350 aa12.92□□□□□ -0.34
PPP1R3E-204ENST00000559942 TCIRG1Q13488 830 aa12.92□□□□□ -0.34
PPP1R3E-204ENST00000559942 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
PPP1R3E-204ENST00000559942 ARHGEF6Q15052 776 aa12.92□□□□□ -0.34
PPP1R3E-204ENST00000559942 CLEC4GQ6UXB4 293 aa12.92□□□□□ -0.34
PPP1R3E-204ENST00000559942 SH3TC2Q8TF17 1288 aa12.92□□□□□ -0.34
PPP1R3E-204ENST00000559942 TESK2Q96S53 571 aa12.92□□□□□ -0.34
PPP1R3E-204ENST00000559942 PRUNE2Q8WUY3 3088 aa12.92□□□□□ -0.34
PPP1R3E-204ENST00000559942 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
PPP1R3E-204ENST00000559942 DZIP3Q86Y13 1208 aaKnown RBP12.91□□□□□ -0.34
PPP1R3E-204ENST00000559942 MAFAQ8NHW3 353 aaPredicted RBP12.91□□□□□ -0.34
PPP1R3E-204ENST00000559942 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
PPP1R3E-204ENST00000559942 ASTN2O75129 1339 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3E-204ENST00000559942 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.34
PPP1R3E-204ENST00000559942 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
PPP1R3E-204ENST00000559942 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3E-204ENST00000559942 KIAA2012Q0VF49 1180 aa12.9□□□□□ -0.34
PPP1R3E-204ENST00000559942 FAM109BQ6ICB4 259 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3E-204ENST00000559942 ALYREFQ86V81 257 aaKnown RBP12.9□□□□□ -0.34
PPP1R3E-204ENST00000559942 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 POTEB2H3BUK9 544 aa12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 TJAP1Q5JTD0 557 aa12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 TDHQ8IZJ6 230 aa12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 FAM161BQ96MY7 647 aa12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 RTFDC1Q9BY42 306 aaPredicted RBP12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 NIP7Q9Y221 180 aaKnown RBP eCLIP12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 ZNF652Q9Y2D9 606 aa12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
PPP1R3E-204ENST00000559942 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 ZNF646O15015 1829 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 EYSQ5T1H1 3165 aa12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 PSMD14O00487 310 aa12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 CRHR2Q13324 411 aa12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 SPRYD7Q5W111 196 aa12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
PPP1R3E-204ENST00000559942 IGF2BP3O00425 579 aaKnown RBP eCLIP12.87□□□□□ -0.35
PPP1R3E-204ENST00000559942 RPS12P25398 132 aaKnown RBP12.87□□□□□ -0.35
PPP1R3E-204ENST00000559942 TNNT2P45379 298 aaPredicted RBP12.87□□□□□ -0.35
PPP1R3E-204ENST00000559942 GJA8P48165 433 aa12.87□□□□□ -0.35
PPP1R3E-204ENST00000559942 MTFR1Q15390 333 aa12.87□□□□□ -0.35
PPP1R3E-204ENST00000559942 LGR6Q9HBX8 967 aa12.87□□□□□ -0.35
PPP1R3E-204ENST00000559942 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms