RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 USPL1Q5W0Q7 1092 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 ATG9AQ7Z3C6 839 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 RBSNQ9H1K0 784 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 ALDH8A1Q9H2A2 487 aaPredicted RBP20.48■□□□□ 0.87
RMDN3-207ENST00000558777 STRN4Q9NRL3 753 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 HMG20BQ9P0W2 317 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 NUP188Q5SRE5 1749 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 ST3GAL1Q11201 340 aa20.47■□□□□ 0.87
RMDN3-207ENST00000558777 ME3Q16798 604 aa20.47■□□□□ 0.87
RMDN3-207ENST00000558777 USP48Q86UV5 1035 aa20.47■□□□□ 0.87
RMDN3-207ENST00000558777 GPR108Q9NPR9 543 aa20.47■□□□□ 0.87
RMDN3-207ENST00000558777 ABCA3Q99758 1704 aa20.47■□□□□ 0.87
RMDN3-207ENST00000558777 GJB2P29033 226 aa20.47■□□□□ 0.87
RMDN3-207ENST00000558777 EVA1CP58658 441 aa20.47■□□□□ 0.87
RMDN3-207ENST00000558777 FOXD4L6Q3SYB3 417 aaPredicted RBP20.47■□□□□ 0.87
RMDN3-207ENST00000558777 FOXD4L3Q6VB84 417 aaPredicted RBP20.47■□□□□ 0.87
RMDN3-207ENST00000558777 ZBTB3Q9H5J0 574 aa20.47■□□□□ 0.87
RMDN3-207ENST00000558777 SHANK3Q9BYB0 1731 aa20.46■□□□□ 0.87
RMDN3-207ENST00000558777 GDPD2Q9HCC8 539 aa20.46■□□□□ 0.87
RMDN3-207ENST00000558777 TPCN1Q9ULQ1 816 aa20.46■□□□□ 0.87
RMDN3-207ENST00000558777 CHMP3Q9Y3E7 222 aa20.46■□□□□ 0.87
RMDN3-207ENST00000558777 SYCE3A1L190 88 aa20.45■□□□□ 0.86
RMDN3-207ENST00000558777 F13A1P00488 732 aa20.45■□□□□ 0.86
RMDN3-207ENST00000558777 BLOC1S2Q6QNY1 142 aa20.45■□□□□ 0.86
RMDN3-207ENST00000558777 ANP32BQ92688 251 aaKnown RBP20.45■□□□□ 0.86
RMDN3-207ENST00000558777 TRIM44Q96DX7 344 aaPredicted RBP20.45■□□□□ 0.86
RMDN3-207ENST00000558777 GADD45BO75293 160 aaPredicted RBP20.45■□□□□ 0.86
RMDN3-207ENST00000558777 RPS6KB1P23443 525 aa20.45■□□□□ 0.86
RMDN3-207ENST00000558777 IL15P40933 162 aaPredicted RBP20.45■□□□□ 0.86
RMDN3-207ENST00000558777 COL9A3Q14050 684 aaPredicted RBP20.45■□□□□ 0.86
RMDN3-207ENST00000558777 DNAJC2Q99543 621 aaKnown RBP20.45■□□□□ 0.86
RMDN3-207ENST00000558777 ATG3Q9NT62 314 aa20.45■□□□□ 0.86
RMDN3-207ENST00000558777 TAF6LQ9Y6J9 622 aa20.45■□□□□ 0.86
RMDN3-207ENST00000558777 NDUFB9Q9Y6M9 179 aa20.45■□□□□ 0.86
RMDN3-207ENST00000558777 CLCN1P35523 988 aa20.44■□□□□ 0.86
RMDN3-207ENST00000558777 ANKRD1Q15327 319 aa20.44■□□□□ 0.86
RMDN3-207ENST00000558777 ATP6V1DQ9Y5K8 247 aa20.44■□□□□ 0.86
RMDN3-207ENST00000558777 TJP1Q07157 1748 aa20.44■□□□□ 0.86
RMDN3-207ENST00000558777 ZNF609O15014 1411 aa20.44■□□□□ 0.86
RMDN3-207ENST00000558777 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
RMDN3-207ENST00000558777 ISCA1Q9BUE6 129 aa20.44■□□□□ 0.86
RMDN3-207ENST00000558777 KBTBD3Q8NAB2 608 aa20.43■□□□□ 0.86
RMDN3-207ENST00000558777 TMOD3Q9NYL9 352 aa20.43■□□□□ 0.86
RMDN3-207ENST00000558777 MTMR6Q9Y217 621 aa20.43■□□□□ 0.86
RMDN3-207ENST00000558777 ESPNB1AK53 854 aa20.42■□□□□ 0.86
RMDN3-207ENST00000558777 MCMDC2Q4G0Z9 681 aa20.42■□□□□ 0.86
RMDN3-207ENST00000558777 TICAM2Q86XR7 235 aa20.42■□□□□ 0.86
RMDN3-207ENST00000558777 NECAB1Q8N987 351 aa20.42■□□□□ 0.86
RMDN3-207ENST00000558777 CNPY2Q9Y2B0 182 aa20.42■□□□□ 0.86
RMDN3-207ENST00000558777 EYA2O00167 538 aa20.42■□□□□ 0.86
RMDN3-207ENST00000558777 CIAO1O76071 339 aa20.42■□□□□ 0.86
RMDN3-207ENST00000558777 KRT32Q14532 448 aa20.42■□□□□ 0.86
RMDN3-207ENST00000558777 TOB2Q14106 344 aaPredicted RBP20.41■□□□□ 0.86
RMDN3-207ENST00000558777 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
RMDN3-207ENST00000558777 U3KPZ7 1027 aaPredicted RBP20.41■□□□□ 0.86
RMDN3-207ENST00000558777 PALLDQ8WX93 1383 aa20.41■□□□□ 0.86
RMDN3-207ENST00000558777 PDIA4P13667 645 aaKnown RBP20.41■□□□□ 0.86
RMDN3-207ENST00000558777 TCIRG1Q13488 830 aa20.41■□□□□ 0.86
RMDN3-207ENST00000558777 VSIG10Q8N0Z9 540 aa20.41■□□□□ 0.86
RMDN3-207ENST00000558777 NEUROD6Q96NK8 337 aa20.41■□□□□ 0.86
RMDN3-207ENST00000558777 SH3TC1Q8TE82 1336 aa20.4■□□□□ 0.86
RMDN3-207ENST00000558777 CHGBP05060 677 aa20.4■□□□□ 0.86
RMDN3-207ENST00000558777 TIMM10P62072 90 aa20.4■□□□□ 0.86
RMDN3-207ENST00000558777 TRIM28Q13263 835 aaKnown RBP20.4■□□□□ 0.86
RMDN3-207ENST00000558777 LRRC24Q50LG9 513 aa20.4■□□□□ 0.86
RMDN3-207ENST00000558777 SEC62Q99442 399 aaKnown RBP20.4■□□□□ 0.86
RMDN3-207ENST00000558777 TEX13AQ9BXU3 409 aaPredicted RBP20.4■□□□□ 0.86
RMDN3-207ENST00000558777 TOGARAM1Q9Y4F4 1720 aa20.4■□□□□ 0.86
RMDN3-207ENST00000558777 CCDC129Q6ZRS4 1044 aa20.39■□□□□ 0.86
RMDN3-207ENST00000558777 ZNF594Q96JF6 807 aaPredicted RBP20.39■□□□□ 0.85
RMDN3-207ENST00000558777 TCEANC2Q96MN5 208 aa20.39■□□□□ 0.85
RMDN3-207ENST00000558777 PAG1Q9NWQ8 432 aa20.39■□□□□ 0.85
RMDN3-207ENST00000558777 NHSL1Q5SYE7 1610 aa20.38■□□□□ 0.85
RMDN3-207ENST00000558777 PHF14O94880 888 aa20.38■□□□□ 0.85
RMDN3-207ENST00000558777 UBE2HP62256 183 aa20.38■□□□□ 0.85
RMDN3-207ENST00000558777 PIGBQ92521 554 aa20.38■□□□□ 0.85
RMDN3-207ENST00000558777 PDLIM2Q96JY6 352 aa20.38■□□□□ 0.85
RMDN3-207ENST00000558777 NEK1Q96PY6 1258 aa20.38■□□□□ 0.85
RMDN3-207ENST00000558777 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
RMDN3-207ENST00000558777 ASAP1Q9ULH1 1129 aa20.38■□□□□ 0.85
RMDN3-207ENST00000558777 KDM4FA0A1W2PPD8 638 aa20.37■□□□□ 0.85
RMDN3-207ENST00000558777 GOLIM4O00461 696 aa20.37■□□□□ 0.85
RMDN3-207ENST00000558777 DTNBO60941 627 aa20.37■□□□□ 0.85
RMDN3-207ENST00000558777 DNAJC10Q8IXB1 793 aa20.37■□□□□ 0.85
RMDN3-207ENST00000558777 CCDC9Q9Y3X0 531 aaKnown RBP20.37■□□□□ 0.85
RMDN3-207ENST00000558777 PUS3Q9BZE2 481 aaKnown RBP20.36■□□□□ 0.85
RMDN3-207ENST00000558777 TSPY26PQ9H489 355 aa20.36■□□□□ 0.85
RMDN3-207ENST00000558777 FBXO3Q9UK99 471 aa20.36■□□□□ 0.85
RMDN3-207ENST00000558777 A0A1B0GUL7 405 aa20.36■□□□□ 0.85
RMDN3-207ENST00000558777 CYP21A2P08686 494 aa20.36■□□□□ 0.85
RMDN3-207ENST00000558777 PDCP20941 246 aa20.36■□□□□ 0.85
RMDN3-207ENST00000558777 CSPP1Q1MSJ5 1256 aa20.36■□□□□ 0.85
RMDN3-207ENST00000558777 LARP1BQ659C4 914 aaKnown RBP20.36■□□□□ 0.85
RMDN3-207ENST00000558777 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.36■□□□□ 0.85
RMDN3-207ENST00000558777 PLA2G12BQ9BX93 195 aa20.36■□□□□ 0.85
RMDN3-207ENST00000558777 VPS37CA5D8V6 355 aaPredicted RBP20.35■□□□□ 0.85
RMDN3-207ENST00000558777 PCCAP05165 728 aaPredicted RBP20.35■□□□□ 0.85
RMDN3-207ENST00000558777 DNM1Q05193 864 aaKnown RBP20.35■□□□□ 0.85
RMDN3-207ENST00000558777 ZMYM1Q5SVZ6 1142 aa20.35■□□□□ 0.85
RMDN3-207ENST00000558777 KIF6Q6ZMV9 814 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms