RNA–Protein interactions for RNA: ENST00000558246.1

AC087477.5-201, humanhuman

TSL 3 BASIC

Gene AC087477.5, Length 562 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.5-201ENST00000558246 BRD1O95696 1058 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 SSFA2P28290 1259 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 MCM5P33992 734 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 ANKRD1Q15327 319 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 RNF20Q5VTR2 975 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 FAM184AQ8NB25 1140 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 OTUD7AQ8TE49 926 aaPredicted RBP10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 ANKRD24Q8TF21 1146 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 LTV1Q96GA3 475 aaPredicted RBP10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 PPP1R9BQ96SB3 815 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 BCL2L12Q9HB09 334 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 ECHDC1Q9NTX5 307 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 CHPF2Q9P2E5 772 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 PARP4Q9UKK3 1724 aaKnown RBP10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 RGPD2P0DJD1 1756 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 MRC1P22897 1456 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
AC087477.5-201ENST00000558246 APBB1O00213 710 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 IFIT2P09913 472 aaKnown RBP10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 ZKSCAN1P17029 563 aaPredicted RBP10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 TATP17735 454 aaPredicted RBP10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 PSMA5P28066 241 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 OS9Q13438 667 aaPredicted RBP10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 PPP1R15BQ5SWA1 713 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 KRT28Q7Z3Y7 464 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 PI4K2BQ8TCG2 481 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 KCNB2Q92953 911 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 ALDH8A1Q9H2A2 487 aaPredicted RBP10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 SNRKQ9NRH2 765 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 LMBRD1Q9NUN5 540 aa10.73□□□□□ -0.69
AC087477.5-201ENST00000558246 GRM8O00222 908 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 ATF3P18847 181 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 EIF2S2P20042 333 aaKnown RBP10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 NASPP49321 788 aaPredicted RBP10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 G3BP1Q13283 466 aaKnown RBP eCLIP10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 VPS53Q5VIR6 699 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 MCTP1Q6DN14 999 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 IFNL2Q8IZJ0 200 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 TMEM87AQ8NBN3 555 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 GZF1Q9H116 711 aaPredicted RBP10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 PHAXQ9H814 394 aaKnown RBP10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 DIAPH3Q9NSV4 1193 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 HMG20BQ9P0W2 317 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 LIMCH1Q9UPQ0 1083 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 NPHP3Q7Z494 1330 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 ADCY9O60503 1353 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 PKD1L3Q7Z443 1732 aa10.72□□□□□ -0.69
AC087477.5-201ENST00000558246 CPDO75976 1380 aa10.71□□□□□ -0.69
AC087477.5-201ENST00000558246 PDCP20941 246 aa10.71□□□□□ -0.69
AC087477.5-201ENST00000558246 KRT32Q14532 448 aa10.71□□□□□ -0.69
AC087477.5-201ENST00000558246 NUTM2GQ5VZR2 741 aa10.71□□□□□ -0.69
AC087477.5-201ENST00000558246 DCAF5Q96JK2 942 aa10.71□□□□□ -0.69
AC087477.5-201ENST00000558246 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
AC087477.5-201ENST00000558246 FOSBP53539 338 aa10.7□□□□□ -0.7
AC087477.5-201ENST00000558246 UVSSAQ2YD98 709 aa10.7□□□□□ -0.7
AC087477.5-201ENST00000558246 ZNF790Q6PG37 636 aa10.7□□□□□ -0.7
AC087477.5-201ENST00000558246 SLC52A2Q9HAB3 445 aa10.7□□□□□ -0.7
AC087477.5-201ENST00000558246 LGR6Q9HBX8 967 aa10.7□□□□□ -0.7
AC087477.5-201ENST00000558246 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
AC087477.5-201ENST00000558246 MAP3K2Q9Y2U5 619 aa10.7□□□□□ -0.7
AC087477.5-201ENST00000558246 ESPNB1AK53 854 aa10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 SNRPA1P09661 255 aaKnown RBP10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 NBPF7P0C2Y1 421 aaPredicted RBP10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 TERF1P54274 439 aa10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 LRRFIP1Q32MZ4 808 aaKnown RBP10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 TSGA10IPQ3SY00 556 aa10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 LRSAM1Q6UWE0 723 aa10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 CYP46A1Q9Y6A2 500 aa10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 COL18A1P39060 1754 aa10.69□□□□□ -0.7
AC087477.5-201ENST00000558246 BHMG1C9JSJ3 638 aaPredicted RBP10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 PTPREP23469 700 aa10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 ZSCAN23Q3MJ62 389 aa10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 MPRIPQ6WCQ1 1025 aa10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 TTC5Q8N0Z6 440 aa10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 USHBP1Q8N6Y0 703 aa10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 FMNL2Q96PY5 1086 aa10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 METTL22Q9BUU2 404 aaPredicted RBP10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 LSG1Q9H089 658 aaKnown RBP10.68□□□□□ -0.7
AC087477.5-201ENST00000558246 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 COL22A1Q8NFW1 1626 aaPredicted RBP10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 NECTIN2Q92692 538 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 TTC14Q96N46 770 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 IL1RAPL2Q9NP60 686 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 GPR108Q9NPR9 543 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 COPRSQ9NQ92 184 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 ATG3Q9NT62 314 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 SPEF2Q9C093 1822 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 RGPD5Q99666 1765 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 TNS3Q68CZ2 1445 aa10.67□□□□□ -0.7
AC087477.5-201ENST00000558246 SOS2Q07890 1332 aaPredicted RBP10.66□□□□□ -0.7
AC087477.5-201ENST00000558246 PRPF40AO75400 957 aaKnown RBP10.66□□□□□ -0.7
AC087477.5-201ENST00000558246 HMGB1P09429 215 aaKnown RBP10.66□□□□□ -0.7
AC087477.5-201ENST00000558246 PHKG2P15735 406 aa10.66□□□□□ -0.7
AC087477.5-201ENST00000558246 ZNF772Q68DY9 489 aaPredicted RBP10.66□□□□□ -0.7
AC087477.5-201ENST00000558246 CAVIN1Q6NZI2 390 aaKnown RBP10.66□□□□□ -0.7
AC087477.5-201ENST00000558246 ZSCAN30Q86W11 494 aa10.66□□□□□ -0.7
AC087477.5-201ENST00000558246 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms