RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CNTNAP5Q8WYK1 1306 aa6.42□□□□□ -1.38
SPG11-206ENST00000558093 H3BRB1 525 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 ZBTB39O15060 712 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 SERPINB4P48594 390 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 SNRPNP63162 240 aaKnown RBP6.41□□□□□ -1.38
SPG11-206ENST00000558093 DNM1Q05193 864 aaKnown RBP6.41□□□□□ -1.38
SPG11-206ENST00000558093 SF3B2Q13435 895 aaKnown RBP6.41□□□□□ -1.38
SPG11-206ENST00000558093 TRIP4Q15650 581 aaPredicted RBP6.41□□□□□ -1.38
SPG11-206ENST00000558093 PCSK7Q16549 785 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 DHX32Q7L7V1 743 aaKnown RBP6.41□□□□□ -1.38
SPG11-206ENST00000558093 ATCAYQ86WG3 371 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 GLYCTKQ8IVS8 523 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 EDEM1Q92611 657 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 TUT1Q9H6E5 874 aaKnown RBP6.41□□□□□ -1.38
SPG11-206ENST00000558093 DNAJB12Q9NXW2 375 aaKnown RBP6.41□□□□□ -1.38
SPG11-206ENST00000558093 SLC6A14Q9UN76 642 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 KCNMB2Q9Y691 235 aa6.41□□□□□ -1.38
SPG11-206ENST00000558093 FAM13AO94988 1023 aa6.4□□□□□ -1.38
SPG11-206ENST00000558093 MAP3K6O95382 1288 aa6.4□□□□□ -1.38
SPG11-206ENST00000558093 PSAPP07602 524 aa6.4□□□□□ -1.38
SPG11-206ENST00000558093 EIF1AXP47813 144 aaKnown RBP6.4□□□□□ -1.38
SPG11-206ENST00000558093 DGKGP49619 791 aa6.4□□□□□ -1.38
SPG11-206ENST00000558093 FKBP4Q02790 459 aaKnown RBP eCLIP6.4□□□□□ -1.38
SPG11-206ENST00000558093 NUDT16Q96DE0 195 aaKnown RBP6.4□□□□□ -1.38
SPG11-206ENST00000558093 ZFATQ9P243 1243 aa6.4□□□□□ -1.38
SPG11-206ENST00000558093 M0R082 166 aa6.39□□□□□ -1.39
SPG11-206ENST00000558093 GNB5O14775 395 aa6.39□□□□□ -1.39
SPG11-206ENST00000558093 EGFRP00533 1210 aa6.39□□□□□ -1.39
SPG11-206ENST00000558093 ALBP02768 609 aa6.39□□□□□ -1.39
SPG11-206ENST00000558093 RPLP1P05386 114 aaKnown RBP6.39□□□□□ -1.39
SPG11-206ENST00000558093 MLLT1Q03111 559 aaPredicted RBP6.39□□□□□ -1.39
SPG11-206ENST00000558093 FAM35AQ86V20 835 aa6.39□□□□□ -1.39
SPG11-206ENST00000558093 NLRP13Q86W25 1043 aa6.39□□□□□ -1.39
SPG11-206ENST00000558093 ZNF417Q8TAU3 575 aa6.39□□□□□ -1.39
SPG11-206ENST00000558093 CCER1Q8TC90 406 aaPredicted RBP6.39□□□□□ -1.39
SPG11-206ENST00000558093 ZNF587Q96SQ5 575 aaPredicted RBP6.39□□□□□ -1.39
SPG11-206ENST00000558093 MMP20O60882 483 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 CPB1P15086 417 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 EIF2AK2P19525 551 aaKnown RBP6.38□□□□□ -1.39
SPG11-206ENST00000558093 GPLD1P80108 840 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 PLAURQ03405 335 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 C8orf34Q49A92 452 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 TTC39BQ5VTQ0 682 aaPredicted RBP6.38□□□□□ -1.39
SPG11-206ENST00000558093 PSAPL1Q6NUJ1 521 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 NUDT8Q8WV74 236 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 NSUN5Q96P11 429 aaKnown RBP6.38□□□□□ -1.39
SPG11-206ENST00000558093 MDFIQ99750 246 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 JPH1Q9HDC5 661 aaPredicted RBP6.38□□□□□ -1.39
SPG11-206ENST00000558093 TLR7Q9NYK1 1049 aaKnown RBP6.38□□□□□ -1.39
SPG11-206ENST00000558093 NOP53Q9NZM5 478 aaKnown RBP6.38□□□□□ -1.39
SPG11-206ENST00000558093 EGFL7Q9UHF1 273 aa6.38□□□□□ -1.39
SPG11-206ENST00000558093 LILRB5O75023 590 aa6.37□□□□□ -1.39
SPG11-206ENST00000558093 BRD1O95696 1058 aa6.37□□□□□ -1.39
SPG11-206ENST00000558093 PDGFAP04085 211 aa6.37□□□□□ -1.39
SPG11-206ENST00000558093 MZF1P28698 734 aaPredicted RBP6.37□□□□□ -1.39
SPG11-206ENST00000558093 KCNMA1Q12791 1236 aa6.37□□□□□ -1.39
SPG11-206ENST00000558093 ELMSAN1Q6PJG2 1045 aa6.37□□□□□ -1.39
SPG11-206ENST00000558093 RBSNQ9H1K0 784 aa6.37□□□□□ -1.39
SPG11-206ENST00000558093 ICMTO60725 284 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 RGS9O75916 674 aaPredicted RBP6.36□□□□□ -1.39
SPG11-206ENST00000558093 GDF11O95390 407 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 GHRHP01286 108 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 NRLP54845 237 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 RASSF7Q02833 373 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 PDE12Q6L8Q7 609 aaKnown RBP6.36□□□□□ -1.39
SPG11-206ENST00000558093 HFE2Q6ZVN8 426 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 TMEM151AQ8N4L1 468 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 TRPM4Q8TD43 1214 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 ABI2Q9NYB9 513 aaPredicted RBP6.36□□□□□ -1.39
SPG11-206ENST00000558093 NAGPAQ9UK23 515 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
SPG11-206ENST00000558093 SPDYE3A6NKU9 549 aa6.35□□□□□ -1.39
SPG11-206ENST00000558093 HOXB4P17483 251 aaPredicted RBP6.35□□□□□ -1.39
SPG11-206ENST00000558093 SOX18P35713 384 aa6.35□□□□□ -1.39
SPG11-206ENST00000558093 USP5P45974 858 aa6.35□□□□□ -1.39
SPG11-206ENST00000558093 MICALL1Q8N3F8 863 aa6.35□□□□□ -1.39
SPG11-206ENST00000558093 ELP3Q9H9T3 547 aa6.35□□□□□ -1.39
SPG11-206ENST00000558093 STARD13Q9Y3M8 1113 aa6.35□□□□□ -1.39
SPG11-206ENST00000558093 A6NHS1 94 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 NPR3P17342 541 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 PERM1Q5SV97 790 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 LINC00114Q6XXX2 140 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 C8orf86Q6ZUL3 223 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 TXNDC2Q86VQ3 553 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 SPACA7Q96KW9 195 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 PLVAPQ9BX97 442 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 SUV39H2Q9H5I1 410 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 BRPF3Q9ULD4 1205 aa6.34□□□□□ -1.39
SPG11-206ENST00000558093 LOC102724428A0A0B4J2F2 783 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 J3QW42 95 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 NDUFB5O43674 189 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 SIK1P57059 783 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 EHHADHQ08426 723 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 HYAL2Q12891 473 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 PRRT3Q5FWE3 981 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 NCAPG2Q86XI2 1143 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 OR13H1Q8NG92 308 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 TRIM11Q96F44 468 aa6.33□□□□□ -1.4
SPG11-206ENST00000558093 LPIN3Q9BQK8 851 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms