RNA–Protein interactions for RNA: ENST00000557339.5

LINC01146-207, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3 BASIC

Gene LINC01146, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-207ENST00000557339 RNF135Q8IUD6 432 aa8.38□□□□□ -1.07
LINC01146-207ENST00000557339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■■■□□ 16.6
LINC01146-207ENST00000557339 CRIPAKQ8N1N5 446 aa8.38□□□□□ -1.07
LINC01146-207ENST00000557339 PCDHB11Q9Y5F2 797 aa8.38□□□□□ -1.07
LINC01146-207ENST00000557339 LTBP4Q8N2S1 1624 aa8.38□□□□□ -1.07
LINC01146-207ENST00000557339 PIK3C2AO00443 1686 aa8.37□□□□□ -1.07
LINC01146-207ENST00000557339 USP54Q70EL1 1684 aa8.37□□□□□ -1.07
LINC01146-207ENST00000557339 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
LINC01146-207ENST00000557339 PSME1Q06323 249 aa8.37□□□□□ -1.07
LINC01146-207ENST00000557339 CDCA7Q9BWT1 371 aaPredicted RBP8.37□□□□□ -1.07
LINC01146-207ENST00000557339 MRS2Q9HD23 443 aa8.37□□□□□ -1.07
LINC01146-207ENST00000557339 CYLDQ9NQC7 956 aa8.37□□□□□ -1.07
LINC01146-207ENST00000557339 PGPEP1Q9NXJ5 209 aa8.37□□□□□ -1.07
LINC01146-207ENST00000557339 TRPM3Q9HCF6 1732 aaPredicted RBP8.37□□□□□ -1.07
LINC01146-207ENST00000557339 LILRA1O75019 489 aa8.36□□□□□ -1.07
LINC01146-207ENST00000557339 BMP1P13497 986 aa8.36□□□□□ -1.07
LINC01146-207ENST00000557339 COG3Q96JB2 828 aa8.36□□□□□ -1.07
LINC01146-207ENST00000557339 CALR3Q96L12 384 aaKnown RBP8.36□□□□□ -1.07
LINC01146-207ENST00000557339 UCN2Q96RP3 112 aa8.36□□□□□ -1.07
LINC01146-207ENST00000557339 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
LINC01146-207ENST00000557339 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
LINC01146-207ENST00000557339 FYB1O15117 783 aa8.35□□□□□ -1.07
LINC01146-207ENST00000557339 TNNT2P45379 298 aaPredicted RBP8.35□□□□□ -1.07
LINC01146-207ENST00000557339 SCTRP47872 440 aa8.35□□□□□ -1.07
LINC01146-207ENST00000557339 NME9Q86XW9 330 aa8.35□□□□□ -1.07
LINC01146-207ENST00000557339 ORAI2Q96SN7 254 aa8.35□□□□□ -1.07
LINC01146-207ENST00000557339 NHSL1Q5SYE7 1610 aa8.35□□□□□ -1.07
LINC01146-207ENST00000557339 MARF1Q9Y4F3 1742 aaKnown RBP8.34□□□□□ -1.07
LINC01146-207ENST00000557339 NPHP3Q7Z494 1330 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 ALS2Q96Q42 1657 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 PPP2R1AP30153 589 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
LINC01146-207ENST00000557339 TRIM46Q7Z4K8 759 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 PLPP7Q8NBV4 271 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 CFAP53Q96M91 514 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 SLAIN2Q9P270 581 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 DOLKQ9UPQ8 538 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 LTN1O94822 1766 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 SSH2Q76I76 1423 aa8.34□□□□□ -1.07
LINC01146-207ENST00000557339 ROBO1Q9Y6N7 1651 aa8.34□□□□□ -1.08
LINC01146-207ENST00000557339 OVOS2A0A0J9YW53 1432 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 FOXO3O43524 673 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 SKIP12755 728 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 OXLD1Q5BKU9 147 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 OVOS2Q6IE36 1432 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 TBC1D9Q6ZT07 1266 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 MEIOBQ8N635 442 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 AGBL1Q96MI9 1066 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 ATP13A2Q9NQ11 1180 aa8.33□□□□□ -1.08
LINC01146-207ENST00000557339 ERVK-9P63128 1117 aa8.32□□□□□ -1.08
LINC01146-207ENST00000557339 CC2D2BQ6DHV5 1058 aa8.32□□□□□ -1.08
LINC01146-207ENST00000557339 Q6ZVU0 165 aa8.32□□□□□ -1.08
LINC01146-207ENST00000557339 KRT28Q7Z3Y7 464 aa8.32□□□□□ -1.08
LINC01146-207ENST00000557339 CCDC125Q86Z20 511 aa8.32□□□□□ -1.08
LINC01146-207ENST00000557339 ABTB2Q8N961 1025 aa8.32□□□□□ -1.08
LINC01146-207ENST00000557339 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
LINC01146-207ENST00000557339 SHPRHQ149N8 1683 aa8.31□□□□□ -1.08
LINC01146-207ENST00000557339 WDR43Q15061 677 aaKnown RBP eCLIP8.31□□□□□ -1.08
LINC01146-207ENST00000557339 MRPL14Q6P1L8 145 aaKnown RBP8.31□□□□□ -1.08
LINC01146-207ENST00000557339 BRINP3Q76B58 766 aa8.31□□□□□ -1.08
LINC01146-207ENST00000557339 FAM9BQ8IZU0 186 aa8.31□□□□□ -1.08
LINC01146-207ENST00000557339 RGS17Q9UGC6 210 aaPredicted RBP8.31□□□□□ -1.08
LINC01146-207ENST00000557339 PHRF1Q9P1Y6 1649 aaKnown RBP8.31□□□□□ -1.08
LINC01146-207ENST00000557339 SBNO1A3KN83 1393 aa8.31□□□□□ -1.08
LINC01146-207ENST00000557339 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
LINC01146-207ENST00000557339 PHLPP1O60346 1717 aa8.31□□□□□ -1.08
LINC01146-207ENST00000557339 PXDNQ92626 1479 aa8.31□□□□□ -1.08
LINC01146-207ENST00000557339 ADH1AP07327 375 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 MTHFSP49914 203 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
LINC01146-207ENST00000557339 CCDC184Q52MB2 194 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 C6orf118Q5T5N4 469 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 DEPDC4Q8N2C3 294 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 KDF1Q8NAX2 398 aaPredicted RBP8.3□□□□□ -1.08
LINC01146-207ENST00000557339 PURBQ96QR8 312 aaKnown RBP8.3□□□□□ -1.08
LINC01146-207ENST00000557339 OSBPL3Q9H4L5 887 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 ARHGEF10O15013 1369 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 AATKQ6ZMQ8 1374 aa8.3□□□□□ -1.08
LINC01146-207ENST00000557339 CDK12Q9NYV4 1490 aaPredicted RBP8.3□□□□□ -1.08
LINC01146-207ENST00000557339 TNS3Q68CZ2 1445 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 USP17L5A8MUK1 530 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 POTECB2RU33 542 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
LINC01146-207ENST00000557339 ATP9BO43861 1147 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 TOM1O60784 492 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 RELBQ01201 579 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 MAP7D1Q3KQU3 841 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 NFATC2IPQ8NCF5 419 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 GMPR2Q9P2T1 348 aaKnown RBP8.29□□□□□ -1.08
LINC01146-207ENST00000557339 TFIP11Q9UBB9 837 aaKnown RBP8.29□□□□□ -1.08
LINC01146-207ENST00000557339 ABCA3Q99758 1704 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 CRYBG1Q9Y4K1 1723 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 AHDC1Q5TGY3 1603 aaPredicted RBP8.29□□□□□ -1.08
LINC01146-207ENST00000557339 SLIT3O75094 1523 aa8.29□□□□□ -1.08
LINC01146-207ENST00000557339 SMG6Q86US8 1419 aaKnown RBP8.29□□□□□ -1.08
LINC01146-207ENST00000557339 NCOA4Q13772 614 aa8.28□□□□□ -1.08
LINC01146-207ENST00000557339 NUTM2GQ5VZR2 741 aa8.28□□□□□ -1.08
LINC01146-207ENST00000557339 ERICH6Q7L0X2 663 aa8.28□□□□□ -1.08
LINC01146-207ENST00000557339 KCNH5Q8NCM2 988 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms