RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 TNIP1Q15025 636 aa16.19■□□□□ 0.18
SNX6-209ENST00000557265 ZNF408Q9H9D4 720 aa16.19■□□□□ 0.18
SNX6-209ENST00000557265 NUP98P52948 1817 aa16.18■□□□□ 0.18
SNX6-209ENST00000557265 MLLT1Q03111 559 aaPredicted RBP16.18■□□□□ 0.18
SNX6-209ENST00000557265 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
SNX6-209ENST00000557265 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
SNX6-209ENST00000557265 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
SNX6-209ENST00000557265 ZC3H15Q8WU90 426 aaKnown RBP16.18■□□□□ 0.18
SNX6-209ENST00000557265 HHIPL1Q96JK4 782 aa16.18■□□□□ 0.18
SNX6-209ENST00000557265 CDHR2Q9BYE9 1310 aa16.18■□□□□ 0.18
SNX6-209ENST00000557265 CA12O43570 354 aa16.17■□□□□ 0.18
SNX6-209ENST00000557265 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
SNX6-209ENST00000557265 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
SNX6-209ENST00000557265 CDC37L1Q7L3B6 337 aa16.17■□□□□ 0.18
SNX6-209ENST00000557265 TRPM4Q8TD43 1214 aa16.17■□□□□ 0.18
SNX6-209ENST00000557265 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
SNX6-209ENST00000557265 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
SNX6-209ENST00000557265 CNOT7Q9UIV1 285 aaKnown RBP16.17■□□□□ 0.18
SNX6-209ENST00000557265 KDM3BQ7LBC6 1761 aa16.17■□□□□ 0.18
SNX6-209ENST00000557265 SHTN1A0MZ66 631 aa16.16■□□□□ 0.18
SNX6-209ENST00000557265 SLC34A2O95436 690 aa16.16■□□□□ 0.18
SNX6-209ENST00000557265 RGS19P49795 217 aa16.16■□□□□ 0.18
SNX6-209ENST00000557265 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
SNX6-209ENST00000557265 RIPK4P57078 832 aa16.16■□□□□ 0.18
SNX6-209ENST00000557265 GRAPQ13588 217 aa16.16■□□□□ 0.18
SNX6-209ENST00000557265 GRAPLQ8TC17 118 aaPredicted RBP16.16■□□□□ 0.18
SNX6-209ENST00000557265 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
SNX6-209ENST00000557265 THSD7BQ9C0I4 1608 aa16.16■□□□□ 0.18
SNX6-209ENST00000557265 YDJCA8MPS7 323 aa16.15■□□□□ 0.18
SNX6-209ENST00000557265 H7C1D1 291 aa16.15■□□□□ 0.18
SNX6-209ENST00000557265 TCIRG1Q13488 830 aa16.15■□□□□ 0.18
SNX6-209ENST00000557265 USP48Q86UV5 1035 aa16.15■□□□□ 0.18
SNX6-209ENST00000557265 MCOLN1Q9GZU1 580 aa16.15■□□□□ 0.18
SNX6-209ENST00000557265 SH3TC1Q8TE82 1336 aa16.15■□□□□ 0.18
SNX6-209ENST00000557265 MICALL2Q8IY33 904 aa16.14■□□□□ 0.17
SNX6-209ENST00000557265 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
SNX6-209ENST00000557265 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
SNX6-209ENST00000557265 BABAM1Q9NWV8 329 aa16.14■□□□□ 0.17
SNX6-209ENST00000557265 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
SNX6-209ENST00000557265 DLK2Q6UY11 383 aa16.13■□□□□ 0.17
SNX6-209ENST00000557265 TMC4Q7Z404 712 aa16.13■□□□□ 0.17
SNX6-209ENST00000557265 ZIC5Q96T25 663 aa16.13■□□□□ 0.17
SNX6-209ENST00000557265 HUNKP57058 714 aa16.12■□□□□ 0.17
SNX6-209ENST00000557265 NOGQ13253 232 aa16.12■□□□□ 0.17
SNX6-209ENST00000557265 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
SNX6-209ENST00000557265 SAMD7Q7Z3H4 446 aa16.12■□□□□ 0.17
SNX6-209ENST00000557265 PSMD14O00487 310 aa16.11■□□□□ 0.17
SNX6-209ENST00000557265 DGKZQ13574 1117 aa16.11■□□□□ 0.17
SNX6-209ENST00000557265 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
SNX6-209ENST00000557265 DPF2Q92785 391 aa16.11■□□□□ 0.17
SNX6-209ENST00000557265 NSFL1CQ9UNZ2 370 aaKnown RBP16.11■□□□□ 0.17
SNX6-209ENST00000557265 RIMBP2O15034 1052 aa16.1■□□□□ 0.17
SNX6-209ENST00000557265 TMPOP42166 694 aaKnown RBP16.1■□□□□ 0.17
SNX6-209ENST00000557265 TBC1D10BQ4KMP7 808 aaPredicted RBP16.1■□□□□ 0.17
SNX6-209ENST00000557265 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
SNX6-209ENST00000557265 DBNDD1Q9H9R9 158 aa16.1■□□□□ 0.17
SNX6-209ENST00000557265 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
SNX6-209ENST00000557265 C6orf229H3BNL8 230 aa16.09■□□□□ 0.17
SNX6-209ENST00000557265 EGFRP00533 1210 aa16.09■□□□□ 0.17
SNX6-209ENST00000557265 LMOD3Q0VAK6 560 aa16.09■□□□□ 0.17
SNX6-209ENST00000557265 RBM26Q5T8P6 1007 aaKnown RBP16.09■□□□□ 0.17
SNX6-209ENST00000557265 CELF1Q92879 486 aaKnown RBP16.09■□□□□ 0.17
SNX6-209ENST00000557265 FAM89AQ96GI7 184 aa16.09■□□□□ 0.17
SNX6-209ENST00000557265 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
SNX6-209ENST00000557265 TRPM7Q96QT4 1865 aa16.09■□□□□ 0.17
SNX6-209ENST00000557265 GPSM2P81274 684 aa16.08■□□□□ 0.16
SNX6-209ENST00000557265 RGMBQ6NW40 437 aa16.08■□□□□ 0.16
SNX6-209ENST00000557265 KCNQ5Q9NR82 932 aa16.08■□□□□ 0.16
SNX6-209ENST00000557265 POLLQ9UGP5 575 aa16.08■□□□□ 0.16
SNX6-209ENST00000557265 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.16
SNX6-209ENST00000557265 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 CHL1O00533 1208 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
SNX6-209ENST00000557265 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 DOK7Q18PE1 504 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 RTL5Q5HYW3 569 aaPredicted RBP16.07■□□□□ 0.16
SNX6-209ENST00000557265 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 C2orf69Q8N8R5 385 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 DCPSQ96C86 337 aaKnown RBP16.07■□□□□ 0.16
SNX6-209ENST00000557265 ISCA1Q9BUE6 129 aa16.07■□□□□ 0.16
SNX6-209ENST00000557265 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
SNX6-209ENST00000557265 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
SNX6-209ENST00000557265 FAM155AB1AL88 458 aaPredicted RBP16.06■□□□□ 0.16
SNX6-209ENST00000557265 ECE2O60344 883 aa16.06■□□□□ 0.16
SNX6-209ENST00000557265 RPS12P25398 132 aaKnown RBP16.06■□□□□ 0.16
SNX6-209ENST00000557265 KIF23Q02241 960 aaPredicted RBP16.06■□□□□ 0.16
SNX6-209ENST00000557265 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
SNX6-209ENST00000557265 CCDC102AQ96A19 550 aa16.06■□□□□ 0.16
SNX6-209ENST00000557265 ZNF157P51786 506 aaPredicted RBP16.05■□□□□ 0.16
SNX6-209ENST00000557265 EYA3Q99504 573 aa16.05■□□□□ 0.16
SNX6-209ENST00000557265 RTL9Q8NET4 1388 aa16.04■□□□□ 0.16
SNX6-209ENST00000557265 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
SNX6-209ENST00000557265 CCDC146Q8IYE0 955 aa16.04■□□□□ 0.16
SNX6-209ENST00000557265 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
SNX6-209ENST00000557265 SAGE1Q9NXZ1 904 aa16.04■□□□□ 0.16
SNX6-209ENST00000557265 DBF4Q9UBU7 674 aaPredicted RBP16.04■□□□□ 0.16
SNX6-209ENST00000557265 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
SNX6-209ENST00000557265 TRPA1O75762 1119 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms