RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 C16orf71Q8IYS4 520 aaPredicted RBP17.96■□□□□ 0.47
SLIRP-207ENST00000556831 CRAMP1Q96RY5 1269 aa17.96■□□□□ 0.47
SLIRP-207ENST00000556831 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
SLIRP-207ENST00000556831 PPEF1O14829 653 aaPredicted RBP17.95■□□□□ 0.46
SLIRP-207ENST00000556831 HOXA10P31260 410 aaPredicted RBP17.95■□□□□ 0.46
SLIRP-207ENST00000556831 RTKN2Q8IZC4 609 aa17.95■□□□□ 0.46
SLIRP-207ENST00000556831 ZBTB38Q8NAP3 1195 aaPredicted RBP17.95■□□□□ 0.46
SLIRP-207ENST00000556831 ABCC4O15439 1325 aa17.95■□□□□ 0.46
SLIRP-207ENST00000556831 HNRNPUQ00839 825 aaKnown RBP eCLIP17.94■□□□□ 0.46
SLIRP-207ENST00000556831 CC2D2BQ6DHV5 1058 aa17.94■□□□□ 0.46
SLIRP-207ENST00000556831 DNAAF4Q8WXU2 420 aa17.94■□□□□ 0.46
SLIRP-207ENST00000556831 CDCA7LQ96GN5 454 aa17.94■□□□□ 0.46
SLIRP-207ENST00000556831 PCCAP05165 728 aaPredicted RBP17.93■□□□□ 0.46
SLIRP-207ENST00000556831 IGKV5-2P06315 115 aa17.93■□□□□ 0.46
SLIRP-207ENST00000556831 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
SLIRP-207ENST00000556831 ZNF277Q9NRM2 450 aaPredicted RBP17.93■□□□□ 0.46
SLIRP-207ENST00000556831 LTBP3Q9NS15 1303 aa17.93■□□□□ 0.46
SLIRP-207ENST00000556831 ZC3H4Q9UPT8 1303 aaKnown RBP17.93■□□□□ 0.46
SLIRP-207ENST00000556831 PRDM10Q9NQV6 1147 aa17.92■□□□□ 0.46
SLIRP-207ENST00000556831 KDM2BQ8NHM5 1336 aa17.92■□□□□ 0.46
SLIRP-207ENST00000556831 FKBP4Q02790 459 aaKnown RBP eCLIP17.91■□□□□ 0.46
SLIRP-207ENST00000556831 CWF19L2Q2TBE0 894 aaKnown RBP17.91■□□□□ 0.46
SLIRP-207ENST00000556831 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
SLIRP-207ENST00000556831 BBOX1O75936 387 aa17.9■□□□□ 0.46
SLIRP-207ENST00000556831 CT47B1P0C2W7 299 aaPredicted RBP17.9■□□□□ 0.46
SLIRP-207ENST00000556831 GRAPQ13588 217 aa17.9■□□□□ 0.46
SLIRP-207ENST00000556831 CCDC152Q4G0S7 254 aa17.9■□□□□ 0.46
SLIRP-207ENST00000556831 TMC4Q7Z404 712 aa17.9■□□□□ 0.46
SLIRP-207ENST00000556831 LINS1Q8NG48 757 aa17.9■□□□□ 0.46
SLIRP-207ENST00000556831 GRAPLQ8TC17 118 aaPredicted RBP17.9■□□□□ 0.46
SLIRP-207ENST00000556831 PDE8AO60658 829 aa17.89■□□□□ 0.45
SLIRP-207ENST00000556831 CELF1Q92879 486 aaKnown RBP17.89■□□□□ 0.45
SLIRP-207ENST00000556831 SMC4Q9NTJ3 1288 aa17.89■□□□□ 0.45
SLIRP-207ENST00000556831 DUOX1Q9NRD9 1551 aa17.88■□□□□ 0.45
SLIRP-207ENST00000556831 F6X3S4 739 aa17.88■□□□□ 0.45
SLIRP-207ENST00000556831 RGS19P49795 217 aa17.88■□□□□ 0.45
SLIRP-207ENST00000556831 SF3B3Q15393 1217 aaKnown RBP17.88■□□□□ 0.45
SLIRP-207ENST00000556831 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
SLIRP-207ENST00000556831 UBE3BQ7Z3V4 1068 aa17.88■□□□□ 0.45
SLIRP-207ENST00000556831 CCDC85AQ96PX6 553 aaPredicted RBP17.88■□□□□ 0.45
SLIRP-207ENST00000556831 RRAGCQ9HB90 399 aa17.88■□□□□ 0.45
SLIRP-207ENST00000556831 CDHR2Q9BYE9 1310 aa17.88■□□□□ 0.45
SLIRP-207ENST00000556831 LRRC37AA6NMS7 1700 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 POTECB2RU33 542 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 ALDH1L2Q3SY69 923 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 PSMD1Q99460 953 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 SEC31BQ9NQW1 1179 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 ATP6V0A2Q9Y487 856 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 PTPRCP08575 1304 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 ZNF541Q9H0D2 1346 aa17.87■□□□□ 0.45
SLIRP-207ENST00000556831 GCKRQ14397 625 aa17.86■□□□□ 0.45
SLIRP-207ENST00000556831 DPP8Q6V1X1 898 aaPredicted RBP17.86■□□□□ 0.45
SLIRP-207ENST00000556831 SUPT20HQ8NEM7 779 aa17.86■□□□□ 0.45
SLIRP-207ENST00000556831 JDP2Q8WYK2 163 aa17.86■□□□□ 0.45
SLIRP-207ENST00000556831 BCL2L13Q9BXK5 485 aa17.86■□□□□ 0.45
SLIRP-207ENST00000556831 GLTPD2A6NH11 291 aa17.85■□□□□ 0.45
SLIRP-207ENST00000556831 DDNO94850 711 aaPredicted RBP17.85■□□□□ 0.45
SLIRP-207ENST00000556831 IARSP41252 1262 aaKnown RBP17.85■□□□□ 0.45
SLIRP-207ENST00000556831 CTSWP56202 376 aa17.85■□□□□ 0.45
SLIRP-207ENST00000556831 SP8Q8IXZ3 490 aa17.85■□□□□ 0.45
SLIRP-207ENST00000556831 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
SLIRP-207ENST00000556831 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
SLIRP-207ENST00000556831 MYH3P11055 1940 aa17.84■□□□□ 0.45
SLIRP-207ENST00000556831 TRMT2AQ8IZ69 625 aaKnown RBP17.84■□□□□ 0.45
SLIRP-207ENST00000556831 MPNDQ8N594 471 aa17.84■□□□□ 0.45
SLIRP-207ENST00000556831 CDC5LQ99459 802 aaKnown RBP17.84■□□□□ 0.45
SLIRP-207ENST00000556831 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
SLIRP-207ENST00000556831 C9orf78Q9NZ63 289 aaPredicted RBP17.84■□□□□ 0.45
SLIRP-207ENST00000556831 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
SLIRP-207ENST00000556831 LTBP1Q14766 1721 aa17.84■□□□□ 0.45
SLIRP-207ENST00000556831 LARGE2Q8N3Y3 721 aa17.83■□□□□ 0.44
SLIRP-207ENST00000556831 H7C1W4 665 aa17.82■□□□□ 0.44
SLIRP-207ENST00000556831 ALDH1L1O75891 902 aa17.82■□□□□ 0.44
SLIRP-207ENST00000556831 CASP7P55210 303 aa17.82■□□□□ 0.44
SLIRP-207ENST00000556831 RPS8P62241 208 aaKnown RBP17.82■□□□□ 0.44
SLIRP-207ENST00000556831 BEND3Q5T5X7 828 aa17.82■□□□□ 0.44
SLIRP-207ENST00000556831 ANKRD18AQ8IVF6 992 aa17.82■□□□□ 0.44
SLIRP-207ENST00000556831 GPR101Q96P66 508 aaPredicted RBP17.82■□□□□ 0.44
SLIRP-207ENST00000556831 ZBED9Q6R2W3 1325 aa17.81■□□□□ 0.44
SLIRP-207ENST00000556831 KIF16BQ96L93 1317 aa17.81■□□□□ 0.44
SLIRP-207ENST00000556831 PPIP5K2O43314 1243 aa17.81■□□□□ 0.44
SLIRP-207ENST00000556831 AOC3Q16853 763 aa17.81■□□□□ 0.44
SLIRP-207ENST00000556831 ABHD8Q96I13 439 aa17.81■□□□□ 0.44
SLIRP-207ENST00000556831 GRM8O00222 908 aa17.8■□□□□ 0.44
SLIRP-207ENST00000556831 POTEIP0CG38 1075 aa17.8■□□□□ 0.44
SLIRP-207ENST00000556831 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
SLIRP-207ENST00000556831 EIF6P56537 245 aaKnown RBP17.8■□□□□ 0.44
SLIRP-207ENST00000556831 NIM1KQ8IY84 436 aa17.8■□□□□ 0.44
SLIRP-207ENST00000556831 SMC1BQ8NDV3 1235 aa17.8■□□□□ 0.44
SLIRP-207ENST00000556831 NSFL1CQ9UNZ2 370 aaKnown RBP17.8■□□□□ 0.44
SLIRP-207ENST00000556831 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
SLIRP-207ENST00000556831 WTIPA6NIX2 430 aaPredicted RBP17.79■□□□□ 0.44
SLIRP-207ENST00000556831 IGHMBP2P38935 993 aaKnown RBP17.79■□□□□ 0.44
SLIRP-207ENST00000556831 GPSM2P81274 684 aa17.79■□□□□ 0.44
SLIRP-207ENST00000556831 VPS33BQ9H267 617 aa17.79■□□□□ 0.44
SLIRP-207ENST00000556831 GREM2Q9H772 168 aa17.79■□□□□ 0.44
SLIRP-207ENST00000556831 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
SLIRP-207ENST00000556831 FZD9O00144 591 aa17.78■□□□□ 0.44
SLIRP-207ENST00000556831 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms