RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 SSFA2P28290 1259 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 PTPN12Q05209 780 aaKnown RBP12.56□□□□□ -0.4
NEK9-205ENST00000555405 KIF1BPQ96EK5 621 aa12.56□□□□□ -0.4
NEK9-205ENST00000555405 NTSR2O95665 410 aa12.55□□□□□ -0.4
NEK9-205ENST00000555405 HSP90AB4PQ58FF6 505 aa12.55□□□□□ -0.4
NEK9-205ENST00000555405 METTL24Q5JXM2 366 aa12.55□□□□□ -0.4
NEK9-205ENST00000555405 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.55□□□□□ -0.4
NEK9-205ENST00000555405 CEP126Q9P2H0 1117 aa12.55□□□□□ -0.4
NEK9-205ENST00000555405 TAF5LO75529 589 aa12.55□□□□□ -0.4
NEK9-205ENST00000555405 POLA2Q14181 598 aa12.55□□□□□ -0.4
NEK9-205ENST00000555405 R3HDM1Q15032 1099 aaKnown RBP12.55□□□□□ -0.4
NEK9-205ENST00000555405 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
NEK9-205ENST00000555405 CCDC152Q4G0S7 254 aa12.54□□□□□ -0.4
NEK9-205ENST00000555405 PARP3Q9Y6F1 533 aa12.54□□□□□ -0.4
NEK9-205ENST00000555405 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
NEK9-205ENST00000555405 SASH1O94885 1247 aa12.53□□□□□ -0.4
NEK9-205ENST00000555405 NYXQ9GZU5 481 aa12.53□□□□□ -0.4
NEK9-205ENST00000555405 UTYO14607 1347 aa12.53□□□□□ -0.4
NEK9-205ENST00000555405 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
NEK9-205ENST00000555405 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
NEK9-205ENST00000555405 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
NEK9-205ENST00000555405 ADRA2BP18089 450 aa12.53□□□□□ -0.4
NEK9-205ENST00000555405 NLGN1Q8N2Q7 840 aa12.53□□□□□ -0.4
NEK9-205ENST00000555405 PNPLA7Q6ZV29 1317 aa12.52□□□□□ -0.4
NEK9-205ENST00000555405 ZNF622Q969S3 477 aaKnown RBP eCLIP12.52□□□□□ -0.4
NEK9-205ENST00000555405 BOLA2Q9H3K6 86 aa12.52□□□□□ -0.4
NEK9-205ENST00000555405 TLR7Q9NYK1 1049 aaKnown RBP12.52□□□□□ -0.4
NEK9-205ENST00000555405 PAPPAQ13219 1627 aa12.52□□□□□ -0.41
NEK9-205ENST00000555405 EYA2O00167 538 aa12.52□□□□□ -0.41
NEK9-205ENST00000555405 RAB11FIP3O75154 756 aa12.52□□□□□ -0.41
NEK9-205ENST00000555405 ST5P78524 1137 aa12.52□□□□□ -0.41
NEK9-205ENST00000555405 DDR1Q08345 913 aa12.52□□□□□ -0.41
NEK9-205ENST00000555405 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
NEK9-205ENST00000555405 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
NEK9-205ENST00000555405 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
NEK9-205ENST00000555405 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
NEK9-205ENST00000555405 RPGRQ92834 1020 aaKnown RBP12.52□□□□□ -0.41
NEK9-205ENST00000555405 IQSEC3Q9UPP2 1182 aaPredicted RBP12.52□□□□□ -0.41
NEK9-205ENST00000555405 TJP1Q07157 1748 aa12.52□□□□□ -0.41
NEK9-205ENST00000555405 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 MX1P20591 662 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 RABL6Q3YEC7 729 aaPredicted RBP12.51□□□□□ -0.41
NEK9-205ENST00000555405 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
NEK9-205ENST00000555405 MTX1Q13505 466 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 SLC51AQ86UW1 340 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 ANKRD18AQ8IVF6 992 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 CELF1Q92879 486 aaKnown RBP12.51□□□□□ -0.41
NEK9-205ENST00000555405 DNAJC2Q99543 621 aaKnown RBP12.51□□□□□ -0.41
NEK9-205ENST00000555405 ABCC12Q96J65 1359 aa12.51□□□□□ -0.41
NEK9-205ENST00000555405 HSP90B1P14625 803 aaKnown RBP12.5□□□□□ -0.41
NEK9-205ENST00000555405 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
NEK9-205ENST00000555405 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
NEK9-205ENST00000555405 IBTKQ9P2D0 1353 aaPredicted RBP12.5□□□□□ -0.41
NEK9-205ENST00000555405 KCNJ4P48050 445 aa12.5□□□□□ -0.41
NEK9-205ENST00000555405 PDE1AP54750 535 aa12.5□□□□□ -0.41
NEK9-205ENST00000555405 COPRSQ9NQ92 184 aa12.5□□□□□ -0.41
NEK9-205ENST00000555405 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
NEK9-205ENST00000555405 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.413e-7■■■■■ 27.5
NEK9-205ENST00000555405 WTIPA6NIX2 430 aaPredicted RBP12.49□□□□□ -0.41
NEK9-205ENST00000555405 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
NEK9-205ENST00000555405 FRAT2O75474 233 aaPredicted RBP12.49□□□□□ -0.41
NEK9-205ENST00000555405 IL15P40933 162 aaPredicted RBP12.49□□□□□ -0.41
NEK9-205ENST00000555405 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
NEK9-205ENST00000555405 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
NEK9-205ENST00000555405 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
NEK9-205ENST00000555405 CSF1RP07333 972 aa12.49□□□□□ -0.41
NEK9-205ENST00000555405 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 ILDR2Q71H61 639 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 ANKIB1Q9P2G1 1089 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 NOP58Q9Y2X3 529 aaKnown RBP12.48□□□□□ -0.41
NEK9-205ENST00000555405 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 A0A1B0GUL7 405 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
NEK9-205ENST00000555405 ADORA1P30542 326 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
NEK9-205ENST00000555405 FKBP4Q02790 459 aaKnown RBP eCLIP12.48□□□□□ -0.41
NEK9-205ENST00000555405 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 ATG9AQ7Z3C6 839 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 GPATCH3Q96I76 525 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
NEK9-205ENST00000555405 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
NEK9-205ENST00000555405 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
NEK9-205ENST00000555405 ATP2B3Q16720 1220 aa12.47□□□□□ -0.41
NEK9-205ENST00000555405 GPR101Q96P66 508 aaPredicted RBP12.47□□□□□ -0.41
NEK9-205ENST00000555405 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
NEK9-205ENST00000555405 JAG2Q9Y219 1238 aa12.47□□□□□ -0.41
NEK9-205ENST00000555405 C4BP0C0L5 1744 aa12.47□□□□□ -0.41
NEK9-205ENST00000555405 TM4SF1P30408 202 aa12.47□□□□□ -0.41
NEK9-205ENST00000555405 CHRNA5P30532 468 aa12.47□□□□□ -0.41
NEK9-205ENST00000555405 VPS37DQ86XT2 251 aa12.46□□□□□ -0.41
NEK9-205ENST00000555405 NUP98P52948 1817 aa12.46□□□□□ -0.41
NEK9-205ENST00000555405 SDSP20132 328 aa12.46□□□□□ -0.41
NEK9-205ENST00000555405 OLFM4Q6UX06 510 aa12.46□□□□□ -0.41
NEK9-205ENST00000555405 PLA2G12BQ9BX93 195 aa12.46□□□□□ -0.41
NEK9-205ENST00000555405 DBNLQ9UJU6 430 aaKnown RBP12.46□□□□□ -0.41
NEK9-205ENST00000555405 SEC24BO95487 1268 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 242.9 ms