RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 NIM1KQ8IY84 436 aa12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 SUPT20HQ8NEM7 779 aa12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 DDX21Q9NR30 783 aaKnown RBP eCLIP12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 WBP1LQ9NX94 342 aa12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 ATP6V0A2Q9Y487 856 aa12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 TRPM7Q96QT4 1865 aa12.33□□□□□ -0.44
SRP54-AS1-201ENST00000554945 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 BBOX1O75936 387 aa12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 EPS15P42566 896 aa12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 RALBP1Q15311 655 aa12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 LAMB2P55268 1798 aa12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
SRP54-AS1-201ENST00000554945 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
SRP54-AS1-201ENST00000554945 AOC3Q16853 763 aa12.31□□□□□ -0.44
SRP54-AS1-201ENST00000554945 COPS6Q7L5N1 327 aa12.31□□□□□ -0.44
SRP54-AS1-201ENST00000554945 RTFDC1Q9BY42 306 aaPredicted RBP12.31□□□□□ -0.44
SRP54-AS1-201ENST00000554945 ANXA1P04083 346 aa12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 AIMP1Q12904 312 aaKnown RBP12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 ADARB2Q9NS39 739 aaKnown RBP12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 ABCC4O15439 1325 aa12.3□□□□□ -0.44
SRP54-AS1-201ENST00000554945 ECE1P42892 770 aa12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 LBX1P52954 281 aa12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 CXCL9Q07325 125 aa12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 DDX46Q7L014 1031 aaKnown RBP12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 SLC51AQ86UW1 340 aa12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 MPNDQ8N594 471 aa12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 XAGE3Q8WTP9 111 aa12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 GPRC5DQ9NZD1 345 aa12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
SRP54-AS1-201ENST00000554945 CHL1O00533 1208 aa12.28□□□□□ -0.44
SRP54-AS1-201ENST00000554945 HCLS1P14317 486 aaPredicted RBP12.28□□□□□ -0.44
SRP54-AS1-201ENST00000554945 SH3TC1Q8TE82 1336 aa12.28□□□□□ -0.44
SRP54-AS1-201ENST00000554945 FMR1Q06787 632 aaKnown RBP eCLIP12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 KIAA2012Q0VF49 1180 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 GRAPQ13588 217 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 TNIP1Q15025 636 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CST9Q5W186 159 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CIAPIN1Q6FI81 312 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 TMC4Q7Z404 712 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 GRAPLQ8TC17 118 aaPredicted RBP12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CDHR2Q9BYE9 1310 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 TAF1P21675 1872 aa12.27□□□□□ -0.45
SRP54-AS1-201ENST00000554945 THSD7BQ9C0I4 1608 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 TRAF5O00463 557 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 HOXB7P09629 217 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 HSPA8P11142 646 aaKnown RBP12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 GMPSP49915 693 aaPredicted RBP12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CLCN6P51797 869 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 NEUROD2Q15784 382 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 PAXIP1Q6ZW49 1069 aaPredicted RBP12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 GPR101Q96P66 508 aaPredicted RBP12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 DCBLD2Q96PD2 775 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 PGAP2Q9UHJ9 254 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 LAS1LQ9Y4W2 734 aaKnown RBP12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 TLL2Q9Y6L7 1015 aa12.26□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CYP4F22Q6NT55 531 aa12.25□□□□□ -0.45
SRP54-AS1-201ENST00000554945 ANKRD13DQ6ZTN6 518 aa12.25□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
SRP54-AS1-201ENST00000554945 PLBD2Q8NHP8 589 aa12.25□□□□□ -0.45
SRP54-AS1-201ENST00000554945 ZC3H15Q8WU90 426 aaKnown RBP12.25□□□□□ -0.45
SRP54-AS1-201ENST00000554945 RUNDC1Q96C34 613 aa12.25□□□□□ -0.45
SRP54-AS1-201ENST00000554945 MYBBP1AQ9BQG0 1328 aaKnown RBP12.25□□□□□ -0.45
SRP54-AS1-201ENST00000554945 DDX60Q8IY21 1712 aaKnown RBP12.25□□□□□ -0.45
SRP54-AS1-201ENST00000554945 LRRC37AA6NMS7 1700 aa12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 RAD17O75943 681 aa12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 MAP2K2P36507 400 aa12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 KRT24Q2M2I5 525 aa12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 HHIPL1Q96JK4 782 aa12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CHPF2Q9P2E5 772 aa12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
SRP54-AS1-201ENST00000554945 H7C1D1 291 aa12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CELF2O95319 508 aaKnown RBP12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 GRM1Q13255 1194 aa12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 SF3B3Q15393 1217 aaKnown RBP12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CDC37L1Q7L3B6 337 aa12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 SAPCD2Q86UD0 394 aa12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 ISCA1Q9BUE6 129 aa12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
SRP54-AS1-201ENST00000554945 YDJCA8MPS7 323 aa12.22□□□□□ -0.45
SRP54-AS1-201ENST00000554945 HIRAP54198 1017 aaPredicted RBP12.22□□□□□ -0.45
SRP54-AS1-201ENST00000554945 TRIM28Q13263 835 aaKnown RBP12.22□□□□□ -0.45
SRP54-AS1-201ENST00000554945 WASHC4Q2M389 1173 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms