RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 DLG5Q8TDM6 1919 aa19.71■□□□□ 0.75
PCNX1-209ENST00000554879 CHAF1AQ13111 956 aaPredicted RBP19.71■□□□□ 0.75
PCNX1-209ENST00000554879 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
PCNX1-209ENST00000554879 LRRC24Q50LG9 513 aa19.71■□□□□ 0.75
PCNX1-209ENST00000554879 MCTP1Q6DN14 999 aa19.71■□□□□ 0.75
PCNX1-209ENST00000554879 HLFQ16534 295 aa19.7■□□□□ 0.74
PCNX1-209ENST00000554879 NBPF5PQ86XG9 351 aaPredicted RBP19.7■□□□□ 0.74
PCNX1-209ENST00000554879 TRERF1Q96PN7 1200 aa19.7■□□□□ 0.74
PCNX1-209ENST00000554879 PSMA5P28066 241 aa19.7■□□□□ 0.74
PCNX1-209ENST00000554879 POLA2Q14181 598 aa19.7■□□□□ 0.74
PCNX1-209ENST00000554879 TCEANC2Q96MN5 208 aa19.7■□□□□ 0.74
PCNX1-209ENST00000554879 ATP10DQ9P241 1426 aa19.7■□□□□ 0.74
PCNX1-209ENST00000554879 GOLGA6L4A6NEF3 574 aa19.7■□□□□ 0.74
PCNX1-209ENST00000554879 KIAA2012Q0VF49 1180 aa19.7■□□□□ 0.74
PCNX1-209ENST00000554879 FBXW7Q969H0 707 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 A0A1B0GUL7 405 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 KIF1AQ12756 1690 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 ZSCAN30Q86W11 494 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 PUS3Q9BZE2 481 aaKnown RBP19.69■□□□□ 0.74
PCNX1-209ENST00000554879 LTN1O94822 1766 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 MAP3K15Q6ZN16 1313 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 SPDYE4A6NLX3 237 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 BLOC1S2Q6QNY1 142 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 RBM25P49756 843 aaKnown RBP19.69■□□□□ 0.74
PCNX1-209ENST00000554879 FAM227BQ96M60 508 aa19.69■□□□□ 0.74
PCNX1-209ENST00000554879 COL5A2P05997 1499 aaPredicted RBP19.68■□□□□ 0.74
PCNX1-209ENST00000554879 OVOS2A0A0G2JMS6 1433 aa19.68■□□□□ 0.74
PCNX1-209ENST00000554879 NUCB2P80303 420 aa19.68■□□□□ 0.74
PCNX1-209ENST00000554879 PDRG1Q9NUG6 133 aa19.68■□□□□ 0.74
PCNX1-209ENST00000554879 GIGYF2Q6Y7W6 1299 aaKnown RBP19.68■□□□□ 0.74
PCNX1-209ENST00000554879 SH3TC1Q8TE82 1336 aa19.68■□□□□ 0.74
PCNX1-209ENST00000554879 SASH1O94885 1247 aa19.68■□□□□ 0.74
PCNX1-209ENST00000554879 SETDB2Q96T68 719 aa19.68■□□□□ 0.74
PCNX1-209ENST00000554879 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.68■□□□□ 0.74
PCNX1-209ENST00000554879 RGS12O14924 1447 aa19.68■□□□□ 0.74
PCNX1-209ENST00000554879 MCM2P49736 904 aa19.67■□□□□ 0.74
PCNX1-209ENST00000554879 TRDNQ13061 729 aa19.67■□□□□ 0.74
PCNX1-209ENST00000554879 RALYLQ86SE5 291 aaKnown RBP19.67■□□□□ 0.74
PCNX1-209ENST00000554879 RTCBQ9Y3I0 505 aaKnown RBP19.67■□□□□ 0.74
PCNX1-209ENST00000554879 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
PCNX1-209ENST00000554879 PPP4R3BQ5MIZ7 849 aa19.67■□□□□ 0.74
PCNX1-209ENST00000554879 CCDC152Q4G0S7 254 aa19.67■□□□□ 0.74
PCNX1-209ENST00000554879 SMIM5Q71RC9 77 aa19.67■□□□□ 0.74
PCNX1-209ENST00000554879 LRP2BPQ9P2M1 347 aa19.67■□□□□ 0.74
PCNX1-209ENST00000554879 CPA1P15085 419 aa19.66■□□□□ 0.74
PCNX1-209ENST00000554879 MARCH10Q8NA82 808 aaPredicted RBP19.66■□□□□ 0.74
PCNX1-209ENST00000554879 CAMTA1Q9Y6Y1 1673 aa19.66■□□□□ 0.74
PCNX1-209ENST00000554879 KDM4AO75164 1064 aa19.66■□□□□ 0.74
PCNX1-209ENST00000554879 PTPN12Q05209 780 aaKnown RBP19.65■□□□□ 0.74
PCNX1-209ENST00000554879 RBM8AQ9Y5S9 174 aaKnown RBP19.65■□□□□ 0.74
PCNX1-209ENST00000554879 PAG1Q9NWQ8 432 aa19.65■□□□□ 0.74
PCNX1-209ENST00000554879 SPATA31A1Q5TZJ5 1347 aa19.65■□□□□ 0.74
PCNX1-209ENST00000554879 CCDC129Q6ZRS4 1044 aa19.65■□□□□ 0.74
PCNX1-209ENST00000554879 THRAP3Q9Y2W1 955 aaKnown RBP19.65■□□□□ 0.74
PCNX1-209ENST00000554879 H3BQV1 296 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 SLC5A1P13866 664 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 RRP12Q5JTH9 1297 aaKnown RBP19.64■□□□□ 0.73
PCNX1-209ENST00000554879 IFFO2Q5TF58 517 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 ZBTB38Q8NAP3 1195 aaPredicted RBP19.64■□□□□ 0.73
PCNX1-209ENST00000554879 COPRSQ9NQ92 184 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 DTNBO60941 627 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 TAF5LO75529 589 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 OSBPL3Q9H4L5 887 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 QTRT2Q9H974 415 aaKnown RBP19.64■□□□□ 0.73
PCNX1-209ENST00000554879 RAI14Q9P0K7 980 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 GREM2Q9H772 168 aa19.64■□□□□ 0.73
PCNX1-209ENST00000554879 PDE8AO60658 829 aa19.63■□□□□ 0.73
PCNX1-209ENST00000554879 STAP2Q9UGK3 403 aa19.63■□□□□ 0.73
PCNX1-209ENST00000554879 MED1Q15648 1581 aaPredicted RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 SLIT3O75094 1523 aa19.63■□□□□ 0.73
PCNX1-209ENST00000554879 CYP19A1P11511 503 aaPredicted RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 IL6STP40189 918 aaPredicted RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 HAND2P61296 217 aa19.63■□□□□ 0.73
PCNX1-209ENST00000554879 GNL2Q13823 731 aaKnown RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 CDC5LQ99459 802 aaKnown RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 DBNLQ9UJU6 430 aaKnown RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 SSFA2P28290 1259 aa19.63■□□□□ 0.73
PCNX1-209ENST00000554879 NKX1-1Q15270 411 aaPredicted RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 CCDC83Q8IWF9 413 aa19.63■□□□□ 0.73
PCNX1-209ENST00000554879 SMAP1Q8IYB5 467 aaPredicted RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 RNF214Q8ND24 703 aa19.63■□□□□ 0.73
PCNX1-209ENST00000554879 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
PCNX1-209ENST00000554879 PCCAP05165 728 aaPredicted RBP19.62■□□□□ 0.73
PCNX1-209ENST00000554879 SGSM2O43147 1006 aa19.62■□□□□ 0.73
PCNX1-209ENST00000554879 NLRP10Q86W26 655 aa19.62■□□□□ 0.73
PCNX1-209ENST00000554879 ISY1Q9ULR0 285 aaKnown RBP19.62■□□□□ 0.73
PCNX1-209ENST00000554879 PALLDQ8WX93 1383 aa19.62■□□□□ 0.73
PCNX1-209ENST00000554879 H7C1W4 665 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 HSPA1LP34931 641 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 CCDC173Q0VFZ6 552 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 PALD1Q9ULE6 856 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.61■□□□□ 0.73
PCNX1-209ENST00000554879 CSPP1Q1MSJ5 1256 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 XAGE2Q96GT9 111 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 ANKIB1Q9P2G1 1089 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 NFXL1Q6ZNB6 911 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 ANKRD18AQ8IVF6 992 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 TMX3Q96JJ7 454 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
PCNX1-209ENST00000554879 AOX1Q06278 1338 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms