RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 STX17P56962 302 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 IKBKGQ9Y6K9 419 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 KINO60870 393 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 UTP14CQ5TAP6 766 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 MCM8Q9UJA3 840 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 LMTK3Q96Q04 1460 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC66A2RUB6 948 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 MTRQ99707 1265 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 CCP110O43303 1012 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 PRPF40BQ6NWY9 871 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 CAPN12Q6ZSI9 719 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 SEPT10Q9P0V9 454 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 APBA3O96018 575 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 SMARCE1Q969G3 411 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 JADE2Q9NQC1 790 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 GADL1Q6ZQY3 521 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 GNPATO15228 680 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 CITO14578 2027 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 COL9A2Q14055 689 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 RABEP1Q15276 862 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 SKA2Q8WVK7 121 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 RFC4P35249 363 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 ITKQ08881 620 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 PLEKHO1Q53GL0 409 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 TLDC2A0PJX2 215 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 TNIP1Q15025 636 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 TSC22D1Q15714 1073 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 DNAJC21Q5F1R6 531 aaKnown RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 SEC63Q9UGP8 760 aaKnown RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 TRIM21P19474 475 aaKnown RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 SAT1P21673 171 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 GEN1Q17RS7 908 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 PRR23CQ6ZRP0 262 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 RINLQ6ZS11 566 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 KLHDC4Q8TBB5 520 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 PPP2R5EQ16537 467 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 NAT10Q9H0A0 1025 aaKnown RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 NESP48681 1621 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 SCNN1DP51172 638 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 TAF7Q15545 349 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 CAPZA3Q96KX2 299 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 CGNL1Q0VF96 1302 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 EVC2Q86UK5 1308 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 HCLS1P14317 486 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 TCEA2Q15560 299 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC129Q6ZRS4 1044 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC25Q86WR0 208 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 MKL2Q9ULH7 1088 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 BACH1O14867 736 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 DESP17661 470 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 TXLNAP40222 546 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 LRMPQ12912 555 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 KRT28Q7Z3Y7 464 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 USTQ9Y2C2 406 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 GPRASP1Q5JY77 1395 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 CYP7A1P22680 504 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 ATP6V1AP38606 617 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC158Q5M9N0 1113 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 MYO18AQ92614 2054 aaKnown RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 IGHMBP2P38935 993 aaKnown RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC117Q8IWD4 279 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 WHAMMQ8TF30 809 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 ZBTB24O43167 697 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 FERP16591 822 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 TNNI2P48788 182 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 PPP1R9BQ96SB3 815 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 NAP1L3Q99457 506 aaPredicted RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 HMGB1P09429 215 aaKnown RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 MTIF2P46199 727 aaKnown RBP3.79□□□□□ -1.8
SYNE2-212ENST00000554584 GBP3Q9H0R5 595 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 FIS1Q9Y3D6 152 aa3.79□□□□□ -1.8
SYNE2-212ENST00000554584 NSMFQ6X4W1 530 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 POMGNT1Q8WZA1 660 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 PARP3Q9Y6F1 533 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 EXOC5O00471 708 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 PPP1R12CQ9BZL4 782 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 RRP9O43818 475 aaKnown RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 RAD17O75943 681 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 PTGS1P23219 599 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 HLTFQ14527 1009 aaKnown RBP eCLIP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 GLYCTKQ8IVS8 523 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 EIF3JO75822 258 aaKnown RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 ZBTB7AO95365 584 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 YIPF2Q9BWQ6 316 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 CENPQQ7L2Z9 268 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 SPECC1Q5M775 1068 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 PDCL2Q8N4E4 241 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 MICAL1Q8TDZ2 1067 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 STAMQ92783 540 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 ERCC4Q92889 916 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 ZNF830Q96NB3 372 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 CEP126Q9P2H0 1117 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 SMARCC2Q8TAQ2 1214 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 SP100P23497 879 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 PLCB3Q01970 1234 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 ARIH1Q9Y4X5 557 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 AFMP43652 599 aa3.78□□□□□ -1.8
SYNE2-212ENST00000554584 MYLK4Q86YV6 388 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-212ENST00000554584 ABT1Q9ULW3 272 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms