RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GMPR2Q9P2T1 348 aaKnown RBP3.52□□□□□ -1.85
PRPF39-206ENST00000554429 WDR90Q96KV7 1748 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 ARFGEF2Q9Y6D5 1785 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 INSRP06213 1382 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 MAP4K4O95819 1239 aaPredicted RBP3.52□□□□□ -1.85
PRPF39-206ENST00000554429 ANKRD24Q8TF21 1146 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 PDGFDQ9GZP0 370 aaPredicted RBP3.52□□□□□ -1.85
PRPF39-206ENST00000554429 GPHNQ9NQX3 736 aaPredicted RBP3.52□□□□□ -1.85
PRPF39-206ENST00000554429 TJP1Q07157 1748 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 SCN11AQ9UI33 1791 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 KAT6BQ8WYB5 2073 aa3.52□□□□□ -1.85
PRPF39-206ENST00000554429 SBF1O95248 1867 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 AXIN1O15169 862 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 ZBTB7AO95365 584 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 GIMAP6Q6P9H5 292 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 HDGFL2Q7Z4V5 671 aaPredicted RBP3.51□□□□□ -1.85
PRPF39-206ENST00000554429 TESK2Q96S53 571 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.51□□□□□ -1.85
PRPF39-206ENST00000554429 POLD1P28340 1107 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 HOXC9P31274 260 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 RTL5Q5HYW3 569 aaPredicted RBP3.51□□□□□ -1.85
PRPF39-206ENST00000554429 NME8Q8N427 588 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 CCDC97Q96F63 343 aaPredicted RBP3.51□□□□□ -1.85
PRPF39-206ENST00000554429 KIAA1522Q9P206 1035 aaPredicted RBP3.51□□□□□ -1.85
PRPF39-206ENST00000554429 KIAA1468Q9P260 1216 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 UBR2Q8IWV8 1755 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 KDRP35968 1356 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 SEMA3EO15041 775 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 ST8SIA5O15466 376 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 ZMYND10O75800 440 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 CANXP27824 592 aaKnown RBP3.51□□□□□ -1.85
PRPF39-206ENST00000554429 RALBP1Q15311 655 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 ADAM33Q9BZ11 813 aa3.51□□□□□ -1.85
PRPF39-206ENST00000554429 DICER1Q9UPY3 1922 aaKnown RBP3.51□□□□□ -1.85
PRPF39-206ENST00000554429 PXDNLA1KZ92 1463 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 TESPA1A2RU30 521 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-206ENST00000554429 LCE3BQ5TA77 95 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 NME9Q86XW9 330 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 ANKLE1Q8NAG6 615 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 SMARCC1Q92922 1105 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-206ENST00000554429 POM121Q96HA1 1249 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 FLT4P35916 1363 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 ATP10DQ9P241 1426 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 MRC1P22897 1456 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 SIPA1L3O60292 1781 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-206ENST00000554429 GIGYF1O75420 1035 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-206ENST00000554429 GDF11O95390 407 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 CSB-PGBD3P0DP91 1061 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 LCE2CQ5TA81 110 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 ZNF697Q5TEC3 545 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 N4BP2Q86UW6 1770 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-206ENST00000554429 ZCRB1Q8TBF4 217 aaKnown RBP3.5□□□□□ -1.85
PRPF39-206ENST00000554429 PCDH11XQ9BZA7 1347 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 PCDH11YQ9BZA8 1340 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 KLHL42Q9P2K6 505 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 PNMA2Q9UL42 364 aa3.5□□□□□ -1.85
PRPF39-206ENST00000554429 ZC3H4Q9UPT8 1303 aaKnown RBP3.5□□□□□ -1.85
PRPF39-206ENST00000554429 ARIH1Q9Y4X5 557 aaPredicted RBP3.5□□□□□ -1.85
PRPF39-206ENST00000554429 KDM6AO15550 1401 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-206ENST00000554429 USP47Q96K76 1375 aa3.49□□□□□ -1.85
PRPF39-206ENST00000554429 SSFA2P28290 1259 aa3.49□□□□□ -1.85
PRPF39-206ENST00000554429 TRIM47Q96LD4 638 aa3.49□□□□□ -1.85
PRPF39-206ENST00000554429 PHF14O94880 888 aa3.49□□□□□ -1.85
PRPF39-206ENST00000554429 YBX3P16989 372 aaKnown RBP eCLIP3.49□□□□□ -1.85
PRPF39-206ENST00000554429 RINLQ6ZS11 566 aa3.49□□□□□ -1.85
PRPF39-206ENST00000554429 COL23A1Q86Y22 540 aaPredicted RBP3.49□□□□□ -1.85
PRPF39-206ENST00000554429 NLRP2Q9NX02 1062 aa3.49□□□□□ -1.85
PRPF39-206ENST00000554429 RPS6KL1Q9Y6S9 549 aa3.49□□□□□ -1.85
PRPF39-206ENST00000554429 PALLDQ8WX93 1383 aa3.49□□□□□ -1.85
PRPF39-206ENST00000554429 AFDNP55196 1824 aaKnown RBP3.49□□□□□ -1.85
PRPF39-206ENST00000554429 PAX3P23760 479 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 GSK3AP49840 483 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 RC3H1Q5TC82 1133 aaKnown RBP3.48□□□□□ -1.85
PRPF39-206ENST00000554429 MRRFQ96E11 262 aaKnown RBP3.48□□□□□ -1.85
PRPF39-206ENST00000554429 COG3Q96JB2 828 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 DNMT3AQ9Y6K1 912 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-206ENST00000554429 MYH14Q7Z406 1995 aaKnown RBP3.48□□□□□ -1.85
PRPF39-206ENST00000554429 BCORQ6W2J9 1755 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 TIAM2Q8IVF5 1701 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 SCN7AQ01118 1682 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 CNTNAP4Q9C0A0 1308 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 A6NJR5 290 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 CCER2I3L3R5 266 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 PPFIA4O75335 1185 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 HSPA6P17066 643 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 PRIM1P49642 420 aaKnown RBP3.48□□□□□ -1.85
PRPF39-206ENST00000554429 TGFB2P61812 414 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 RASSF7Q02833 373 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 FLIIQ13045 1269 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 CNGB1Q14028 1251 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-206ENST00000554429 DRC1Q96MC2 740 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 MFRPQ9BY79 579 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 CCNL1Q9UK58 526 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-206ENST00000554429 WASHC2AQ641Q2 1341 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 SENP3-EIF4A1A0A087X0R7 540 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 KIF4AO95239 1232 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 GMPRP36959 345 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 NLGN2Q8NFZ4 835 aa3.48□□□□□ -1.85
PRPF39-206ENST00000554429 ACSBG1Q96GR2 724 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms