RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 SYCE3A1L190 88 aa10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 RFX5P48382 616 aaPredicted RBP10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 CHAF1AQ13111 956 aaPredicted RBP10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 DNAJC2Q99543 621 aaKnown RBP10.78□□□□□ -0.68
AL049839.2-201ENST00000553947 PCDH11XQ9BZA7 1347 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 PCDH11YQ9BZA8 1340 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 KDM4FA0A1W2PPD8 638 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 CCDC66A2RUB6 948 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 EPB41L2O43491 1005 aaKnown RBP10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 CPA1P15085 419 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 MCM2P49736 904 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 TTLL7Q6ZT98 887 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 DDX54Q8TDD1 881 aaKnown RBP10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 LARP6Q9BRS8 491 aaKnown RBP10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 STRN4Q9NRL3 753 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 DIAPH3Q9NSV4 1193 aa10.77□□□□□ -0.68
AL049839.2-201ENST00000553947 ARFGEF2Q9Y6D5 1785 aa10.77□□□□□ -0.69
AL049839.2-201ENST00000553947 A1BGP04217 495 aa10.77□□□□□ -0.69
AL049839.2-201ENST00000553947 NOLC1Q14978 699 aaKnown RBP eCLIP10.77□□□□□ -0.698e-20■□□□□ 9.4
AL049839.2-201ENST00000553947 FAM227BQ96M60 508 aa10.77□□□□□ -0.69
AL049839.2-201ENST00000553947 LMBRD1Q9NUN5 540 aa10.77□□□□□ -0.69
AL049839.2-201ENST00000553947 PARP4Q9UKK3 1724 aaKnown RBP10.77□□□□□ -0.69
AL049839.2-201ENST00000553947 AFDNP55196 1824 aaKnown RBP10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 A0A087WZG4 1122 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 CASP7P55210 303 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 PTPN12Q05209 780 aaKnown RBP10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 KLHL34Q8N239 644 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 EVI5LQ96CN4 794 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 GPATCH3Q96I76 525 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 BOLA2Q9H3K6 86 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 C17orf53Q8N3J3 647 aaPredicted RBP10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 PLBD2Q8NHP8 589 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 IL2RBP14784 551 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 RABL6Q3YEC7 729 aaPredicted RBP10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 EDC3Q96F86 508 aaKnown RBP10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 TTC14Q96N46 770 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 COPRSQ9NQ92 184 aa10.76□□□□□ -0.69
AL049839.2-201ENST00000553947 LAMB4A4D0S4 1761 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 NMIQ13287 307 aaPredicted RBP10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 KCPQ6ZWJ8 1503 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 ABCA3Q99758 1704 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 ERVV-2B6SEH9 535 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 TFCP2Q12800 502 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 ADCK5Q3MIX3 580 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 TIGD1Q96MW7 591 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 CARD10Q9BWT7 1032 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
AL049839.2-201ENST00000553947 SHANK3Q9BYB0 1731 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 BRD1O95696 1058 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 AK2P54819 239 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 COL9A3Q14050 684 aaPredicted RBP10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 PRPF40BQ6NWY9 871 aaKnown RBP10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 INTS4Q96HW7 963 aaKnown RBP10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 DBNLQ9UJU6 430 aaKnown RBP10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 A0A0D9SFI3 127 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 ERICH4A6NGS2 130 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 DTNBO60941 627 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 RUFY3Q7L099 469 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 RUFY2Q8WXA3 655 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 UBR2Q8IWV8 1755 aa10.74□□□□□ -0.69
AL049839.2-201ENST00000553947 LRSAM1Q6UWE0 723 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 LMBR1LQ6UX01 489 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 ZBTB3Q9H5J0 574 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 CHGBP05060 677 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 CASTP20810 708 aaKnown RBP10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 FOXO4P98177 505 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 TNNI3KQ59H18 835 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 GPT2Q8TD30 523 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 TRIM34Q9BYJ4 488 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 TTC12Q9H892 705 aaPredicted RBP10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 FPGT-TNNI3KV9GXZ4 949 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 CCDC171Q6TFL3 1326 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 H7C1W4 665 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 LARGE1O95461 756 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 EVA1CP58658 441 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 NECTIN1Q15223 517 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 SECISBP2LQ93073 1101 aaKnown RBP10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 FSD1Q9BTV5 496 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 OGFRQ9NZT2 677 aa10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 NSFL1CQ9UNZ2 370 aaKnown RBP10.73□□□□□ -0.69
AL049839.2-201ENST00000553947 COL15A1P39059 1388 aa10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 GTF2F1P35269 517 aaKnown RBP eCLIP10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 TNNT3P45378 269 aaPredicted RBP10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 PIBF1Q8WXW3 757 aa10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 JAKMIP1Q96N16 626 aaKnown RBP10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 FEZ1Q99689 392 aa10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 RBM8AQ9Y5S9 174 aaKnown RBP10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 PAPPAQ13219 1627 aa10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 KCNB2Q92953 911 aa10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 DBNDD2Q9BQY9 259 aa10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 TAF6LQ9Y6J9 622 aa10.72□□□□□ -0.69
AL049839.2-201ENST00000553947 FOXD4L6Q3SYB3 417 aaPredicted RBP10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 NUP188Q5SRE5 1749 aa10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 FOXD4L3Q6VB84 417 aaPredicted RBP10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 ZNF589Q86UQ0 364 aaPredicted RBP10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 TEX2Q8IWB9 1127 aa10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 CHMP3Q9Y3E7 222 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms