RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 SUPT20HQ8NEM7 779 aa10.6□□□□□ -0.71
PCNX1-203ENST00000553272 TRPM4Q8TD43 1214 aa10.6□□□□□ -0.71
PCNX1-203ENST00000553272 CFAP53Q96M91 514 aa10.6□□□□□ -0.71
PCNX1-203ENST00000553272 NLRP3Q96P20 1036 aa10.6□□□□□ -0.71
PCNX1-203ENST00000553272 NUDCQ9Y266 331 aa10.6□□□□□ -0.71
PCNX1-203ENST00000553272 KDM3BQ7LBC6 1761 aa10.6□□□□□ -0.71
PCNX1-203ENST00000553272 SHTN1A0MZ66 631 aa10.59□□□□□ -0.71
PCNX1-203ENST00000553272 RAD17O75943 681 aa10.59□□□□□ -0.71
PCNX1-203ENST00000553272 MYL6BP14649 208 aa10.59□□□□□ -0.71
PCNX1-203ENST00000553272 EIF4A1P60842 406 aaKnown RBP10.59□□□□□ -0.71
PCNX1-203ENST00000553272 TNIP1Q15025 636 aa10.59□□□□□ -0.71
PCNX1-203ENST00000553272 PPP1R42Q7Z4L9 355 aa10.59□□□□□ -0.71
PCNX1-203ENST00000553272 SP8Q8IXZ3 490 aa10.59□□□□□ -0.71
PCNX1-203ENST00000553272 TMX4Q9H1E5 349 aaPredicted RBP10.59□□□□□ -0.71
PCNX1-203ENST00000553272 CNOT7Q9UIV1 285 aaKnown RBP10.59□□□□□ -0.71
PCNX1-203ENST00000553272 ABCC4O15439 1325 aa10.58□□□□□ -0.71
PCNX1-203ENST00000553272 DLG5Q8TDM6 1919 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 ANKRD36CQ5JPF3 1778 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 RBBP6Q7Z6E9 1792 aaKnown RBP10.58□□□□□ -0.72
PCNX1-203ENST00000553272 YDJCA8MPS7 323 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 TRPA1O75762 1119 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 BBOX1O75936 387 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 HUNKP57058 714 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 PARP10Q53GL7 1025 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 HABP4Q5JVS0 413 aaKnown RBP10.58□□□□□ -0.72
PCNX1-203ENST00000553272 DPP8Q6V1X1 898 aaPredicted RBP10.58□□□□□ -0.72
PCNX1-203ENST00000553272 LRP10Q7Z4F1 713 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 USP48Q86UV5 1035 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 MPNDQ8N594 471 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 PNISRQ8TF01 805 aaKnown RBP10.58□□□□□ -0.72
PCNX1-203ENST00000553272 BCL2L13Q9BXK5 485 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 SAGE1Q9NXZ1 904 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 HPS5Q9UPZ3 1129 aa10.58□□□□□ -0.72
PCNX1-203ENST00000553272 KIAA0100Q14667 2235 aaKnown RBP10.58□□□□□ -0.72
PCNX1-203ENST00000553272 CENPFP49454 3210 aa10.57□□□□□ -0.72
PCNX1-203ENST00000553272 TRIOBPQ9H2D6 2365 aa10.57□□□□□ -0.72
PCNX1-203ENST00000553272 RGMBQ6NW40 437 aa10.57□□□□□ -0.72
PCNX1-203ENST00000553272 DPF2Q92785 391 aa10.57□□□□□ -0.72
PCNX1-203ENST00000553272 UTP14AQ9BVJ6 771 aaKnown RBP10.57□□□□□ -0.72
PCNX1-203ENST00000553272 H7C1D1 291 aa10.56□□□□□ -0.72
PCNX1-203ENST00000553272 KIF23Q02241 960 aaPredicted RBP10.56□□□□□ -0.72
PCNX1-203ENST00000553272 PDIA6Q15084 440 aa10.56□□□□□ -0.72
PCNX1-203ENST00000553272 CTU1Q7Z7A3 348 aaKnown RBP10.56□□□□□ -0.72
PCNX1-203ENST00000553272 MICALL2Q8IY33 904 aa10.56□□□□□ -0.72
PCNX1-203ENST00000553272 CCDC102AQ96A19 550 aa10.56□□□□□ -0.72
PCNX1-203ENST00000553272 RNF186Q9NXI6 227 aa10.56□□□□□ -0.72
PCNX1-203ENST00000553272 BRCA2P51587 3418 aa10.56□□□□□ -0.72
PCNX1-203ENST00000553272 ERBB4Q15303 1308 aa10.56□□□□□ -0.72
PCNX1-203ENST00000553272 CEP290O15078 2479 aa10.55□□□□□ -0.72
PCNX1-203ENST00000553272 EGFRP00533 1210 aa10.55□□□□□ -0.72
PCNX1-203ENST00000553272 PPP2R1AP30153 589 aa10.55□□□□□ -0.72
PCNX1-203ENST00000553272 SAMD7Q7Z3H4 446 aa10.55□□□□□ -0.72
PCNX1-203ENST00000553272 GCC1Q96CN9 775 aa10.55□□□□□ -0.72
PCNX1-203ENST00000553272 GBA2Q9HCG7 927 aaPredicted RBP10.55□□□□□ -0.72
PCNX1-203ENST00000553272 ZBTB12Q9Y330 459 aaPredicted RBP10.55□□□□□ -0.72
PCNX1-203ENST00000553272 DUOX1Q9NRD9 1551 aa10.55□□□□□ -0.72
PCNX1-203ENST00000553272 DDX60Q8IY21 1712 aaKnown RBP10.55□□□□□ -0.72
PCNX1-203ENST00000553272 SZT2Q5T011 3432 aa10.55□□□□□ -0.72
PCNX1-203ENST00000553272 HTTP42858 3142 aa10.54□□□□□ -0.72
PCNX1-203ENST00000553272 LRRC37AA6NMS7 1700 aa10.54□□□□□ -0.72
PCNX1-203ENST00000553272 PSMD14O00487 310 aa10.54□□□□□ -0.72
PCNX1-203ENST00000553272 HCLS1P14317 486 aaPredicted RBP10.54□□□□□ -0.72
PCNX1-203ENST00000553272 GRAPQ13588 217 aa10.54□□□□□ -0.72
PCNX1-203ENST00000553272 KRT26Q7Z3Y9 468 aa10.54□□□□□ -0.72
PCNX1-203ENST00000553272 C2orf69Q8N8R5 385 aa10.54□□□□□ -0.72
PCNX1-203ENST00000553272 GRAPLQ8TC17 118 aaPredicted RBP10.54□□□□□ -0.72
PCNX1-203ENST00000553272 CSRNP1Q96S65 589 aa10.54□□□□□ -0.72
PCNX1-203ENST00000553272 THUMPD2Q9BTF0 503 aaKnown RBP10.54□□□□□ -0.72
PCNX1-203ENST00000553272 FXR1P51114 621 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCNX1-203ENST00000553272 ZNF157P51786 506 aaPredicted RBP10.53□□□□□ -0.72
PCNX1-203ENST00000553272 TBC1D10BQ4KMP7 808 aaPredicted RBP10.53□□□□□ -0.72
PCNX1-203ENST00000553272 DDX46Q7L014 1031 aaKnown RBP10.53□□□□□ -0.72
PCNX1-203ENST00000553272 NLRP10Q86W26 655 aa10.53□□□□□ -0.72
PCNX1-203ENST00000553272 PLEKHF1Q96S99 279 aa10.53□□□□□ -0.72
PCNX1-203ENST00000553272 SCN9AQ15858 1988 aa10.53□□□□□ -0.72
PCNX1-203ENST00000553272 ADM5C9JUS6 153 aa10.52□□□□□ -0.73
PCNX1-203ENST00000553272 SLC10A3P09131 477 aa10.52□□□□□ -0.73
PCNX1-203ENST00000553272 RPS12P25398 132 aaKnown RBP10.52□□□□□ -0.73
PCNX1-203ENST00000553272 WASHC4Q2M389 1173 aa10.52□□□□□ -0.73
PCNX1-203ENST00000553272 PROSER3Q2NL68 480 aa10.52□□□□□ -0.73
PCNX1-203ENST00000553272 TMC4Q7Z404 712 aa10.52□□□□□ -0.73
PCNX1-203ENST00000553272 DCPSQ96C86 337 aaKnown RBP10.52□□□□□ -0.73
PCNX1-203ENST00000553272 KCNQ5Q9NR82 932 aa10.52□□□□□ -0.73
PCNX1-203ENST00000553272 ANXA1P04083 346 aa10.51□□□□□ -0.73
PCNX1-203ENST00000553272 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
PCNX1-203ENST00000553272 DBNDD1Q9H9R9 158 aa10.51□□□□□ -0.73
PCNX1-203ENST00000553272 POLLQ9UGP5 575 aa10.51□□□□□ -0.73
PCNX1-203ENST00000553272 RTL9Q8NET4 1388 aa10.51□□□□□ -0.73
PCNX1-203ENST00000553272 EIF2S2P20042 333 aaKnown RBP10.5□□□□□ -0.73
PCNX1-203ENST00000553272 TCIRG1Q13488 830 aa10.5□□□□□ -0.73
PCNX1-203ENST00000553272 HSP90AB3PQ58FF7 597 aa10.5□□□□□ -0.73
PCNX1-203ENST00000553272 RBM26Q5T8P6 1007 aaKnown RBP10.5□□□□□ -0.73
PCNX1-203ENST00000553272 COPS6Q7L5N1 327 aa10.5□□□□□ -0.73
PCNX1-203ENST00000553272 REM2Q8IYK8 340 aaPredicted RBP10.5□□□□□ -0.73
PCNX1-203ENST00000553272 CCER1Q8TC90 406 aaPredicted RBP10.5□□□□□ -0.73
PCNX1-203ENST00000553272 TRMT112Q9UI30 125 aaKnown RBP10.5□□□□□ -0.73
PCNX1-203ENST00000553272 HDAC9Q9UKV0 1011 aa10.5□□□□□ -0.73
PCNX1-203ENST00000553272 NSFL1CQ9UNZ2 370 aaKnown RBP10.5□□□□□ -0.73
PCNX1-203ENST00000553272 SH3TC1Q8TE82 1336 aa10.5□□□□□ -0.73
PCNX1-203ENST00000553272 PSME4Q14997 1843 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms