RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ZNF75DP51815 510 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 GNG11P61952 73 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 PTH1RQ03431 593 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 CCDC144CPQ8IYA2 1237 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 KLHDC4Q8TBB5 520 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 ZBTB9Q96C00 473 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 OGFRQ9NZT2 677 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 MTMR6Q9Y217 621 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 CCDC150Q8NCX0 1101 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 ZDHHC9Q9Y397 364 aa11.87□□□□□ -0.51
SMARCC2-209ENST00000550164 MARCKSP29966 332 aaPredicted RBP11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 PDE4CQ08493 712 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 MCMDC2Q4G0Z9 681 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 SYT10Q6XYQ8 523 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 LINS1Q8NG48 757 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 AOX1Q06278 1338 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 ZNF213O14771 459 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 UBASH3AP57075 661 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 XAGE3Q8WTP9 111 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 PTPDC1A2A3K4 754 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 EPB41L2O43491 1005 aaKnown RBP11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 JAK2O60674 1132 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 EIF3JO75822 258 aaKnown RBP11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 KIF4BQ2VIQ3 1234 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 TTC6Q86TZ1 520 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 POGZQ7Z3K3 1410 aa11.86□□□□□ -0.51
SMARCC2-209ENST00000550164 MAP3K5Q99683 1374 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 KLF18A0A0U1RQI7 1052 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 A0A1B0GVL5 298 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 CCDC129Q6ZRS4 1044 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 LRRC59Q96AG4 307 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 RGS12O14924 1447 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 SETQ01105 290 aaPredicted RBP11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 ANKRD13DQ6ZTN6 518 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 MICU3Q86XE3 530 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 SSH3Q8TE77 659 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 BICC1Q9H694 974 aaKnown RBP11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 PDLIM2Q96JY6 352 aa11.85□□□□□ -0.51
SMARCC2-209ENST00000550164 SYKP43405 635 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 ADCK5Q3MIX3 580 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 CLTCL1P53675 1640 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 ATF3P18847 181 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 FAM193AP78312 1265 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 PTCH1Q13635 1447 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 TDO2P48775 406 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 KIF6Q6ZMV9 814 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 TIGD1Q96MW7 591 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 ZSCAN25Q6NSZ9 544 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 CLEC17AQ6ZS10 378 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 GTF3C6Q969F1 213 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 AIDAQ96BJ3 306 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 LGR6Q9HBX8 967 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 TPCN1Q9ULQ1 816 aa11.84□□□□□ -0.51
SMARCC2-209ENST00000550164 MADDQ8WXG6 1647 aa11.83□□□□□ -0.51
SMARCC2-209ENST00000550164 JAKMIP3Q5VZ66 844 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 LMBR1LQ6UX01 489 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 KCNG4Q8TDN1 519 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 EDC3Q96F86 508 aaKnown RBP11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 NCOA5Q9HCD5 579 aaKnown RBP11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 SSH2Q76I76 1423 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 SPTLC2O15270 562 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 KIF5CO60282 957 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 NR1I2O75469 434 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 CLSTN1O94985 981 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 ELF2Q15723 593 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 NACAP1Q9BZK3 213 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 NRBP1Q9UHY1 535 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 KIF20AO95235 890 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 HOXC9P31274 260 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 CCDC12Q8WUD4 166 aaPredicted RBP11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 STAP2Q9UGK3 403 aa11.83□□□□□ -0.52
SMARCC2-209ENST00000550164 UHRF1BP1LA0JNW5 1464 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 UNC13BO14795 1591 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 CCDC102BQ68D86 513 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 DHX32Q7L7V1 743 aaKnown RBP11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 UBAC1Q9BSL1 405 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 LMAN1P49257 510 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 TFCP2Q12800 502 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 MAGEC2Q9UBF1 373 aaPredicted RBP11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 H0YHG0 523 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 TXLNAP40222 546 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 FAM160A1Q05DH4 1040 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 TM6SF1Q9BZW5 370 aa11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 LSG1Q9H089 658 aaKnown RBP11.82□□□□□ -0.52
SMARCC2-209ENST00000550164 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms