RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LRRC24Q50LG9 513 aa16.24■□□□□ 0.19
PRPF40B-209ENST00000548825 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRPF40B-209ENST00000548825 UBE2HP62256 183 aa16.23■□□□□ 0.19
PRPF40B-209ENST00000548825 KRT85P78386 507 aa16.23■□□□□ 0.19
PRPF40B-209ENST00000548825 AOX1Q06278 1338 aa16.23■□□□□ 0.19
PRPF40B-209ENST00000548825 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
PRPF40B-209ENST00000548825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRPF40B-209ENST00000548825 LIG1P18858 919 aa16.23■□□□□ 0.19
PRPF40B-209ENST00000548825 NECTIN1Q15223 517 aa16.23■□□□□ 0.19
PRPF40B-209ENST00000548825 PUS3Q9BZE2 481 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-209ENST00000548825 DACT1Q9NYF0 836 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 APPP05067 770 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 APOBRQ0VD83 1088 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 TTLL5Q6EMB2 1281 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 SYNE4Q8N205 404 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 ANKARQ7Z5J8 1434 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 UQCRHLA0A096LP55 91 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 UQCRHP07919 91 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 PTPN12Q05209 780 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 TTC6Q86TZ1 520 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 NEK1Q96PY6 1258 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 ZSWIM6Q9HCJ5 1215 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 KIF13AQ9H1H9 1805 aa16.22■□□□□ 0.19
PRPF40B-209ENST00000548825 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
PRPF40B-209ENST00000548825 LUZP1Q86V48 1076 aa16.21■□□□□ 0.19
PRPF40B-209ENST00000548825 ZKSCAN5Q9Y2L8 839 aa16.21■□□□□ 0.19
PRPF40B-209ENST00000548825 PI16Q6UXB8 463 aa16.21■□□□□ 0.19
PRPF40B-209ENST00000548825 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-209ENST00000548825 TCHHQ07283 1943 aa16.21■□□□□ 0.18
PRPF40B-209ENST00000548825 ST3GAL1Q11201 340 aa16.21■□□□□ 0.18
PRPF40B-209ENST00000548825 MAP4K1Q92918 833 aa16.21■□□□□ 0.18
PRPF40B-209ENST00000548825 TNMDQ9H2S6 317 aa16.21■□□□□ 0.18
PRPF40B-209ENST00000548825 ZSCAN31Q96LW9 406 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-209ENST00000548825 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
PRPF40B-209ENST00000548825 HIP1O00291 1037 aa16.2■□□□□ 0.18
PRPF40B-209ENST00000548825 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
PRPF40B-209ENST00000548825 SH2B1Q9NRF2 756 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-209ENST00000548825 NUP62CLQ9H1M0 184 aa16.19■□□□□ 0.18
PRPF40B-209ENST00000548825 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
PRPF40B-209ENST00000548825 TAF5LO75529 589 aa16.19■□□□□ 0.18
PRPF40B-209ENST00000548825 RPS6KB1P23443 525 aa16.19■□□□□ 0.18
PRPF40B-209ENST00000548825 CYP21A2P08686 494 aa16.18■□□□□ 0.18
PRPF40B-209ENST00000548825 DCAF5Q96JK2 942 aa16.18■□□□□ 0.18
PRPF40B-209ENST00000548825 TOMM22Q9NS69 142 aa16.18■□□□□ 0.18
PRPF40B-209ENST00000548825 RXRAP19793 462 aa16.18■□□□□ 0.18
PRPF40B-209ENST00000548825 MTX1Q13505 466 aa16.18■□□□□ 0.18
PRPF40B-209ENST00000548825 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
PRPF40B-209ENST00000548825 HELBQ8NG08 1087 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-209ENST00000548825 TRIM5Q9C035 493 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 TMEM94Q12767 1356 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 CSPP1Q1MSJ5 1256 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 CCDC57Q2TAC2 916 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 CHMP4CQ96CF2 233 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 POLR3DP05423 398 aaPredicted RBP16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 NBPF14Q5TI25 921 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 CWC25Q9NXE8 425 aaPredicted RBP16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-209ENST00000548825 TOB2Q14106 344 aaPredicted RBP16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 MCMDC2Q4G0Z9 681 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 ZCRB1Q8TBF4 217 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 ARHGAP23Q9P227 1491 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 ADGRL3Q9HAR2 1447 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 ISM2Q6H9L7 571 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 PAG1Q9NWQ8 432 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 A0A1B0GUL7 405 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 OFD1O75665 1012 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 TTC39AQ5SRH9 613 aa16.16■□□□□ 0.18
PRPF40B-209ENST00000548825 PDCP20941 246 aa16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 ADORA1P30542 326 aa16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 ME1P48163 572 aa16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 ANO6Q4KMQ2 910 aa16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 DNAJC25Q9H1X3 360 aa16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 SF3A1Q15459 793 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 CCDC82Q8N4S0 544 aa16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 ZNF592Q92610 1267 aa16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 NPHP4O75161 1426 aaPredicted RBP16.15■□□□□ 0.18
PRPF40B-209ENST00000548825 RGPD1P0DJD0 1748 aa16.14■□□□□ 0.17
PRPF40B-209ENST00000548825 SNAP23O00161 211 aa16.14■□□□□ 0.17
PRPF40B-209ENST00000548825 NR1I2O75469 434 aa16.14■□□□□ 0.17
PRPF40B-209ENST00000548825 IDH1O75874 414 aaKnown RBP16.14■□□□□ 0.17
PRPF40B-209ENST00000548825 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
PRPF40B-209ENST00000548825 SLIT1O75093 1534 aa16.14■□□□□ 0.17
PRPF40B-209ENST00000548825 ANKRD1Q15327 319 aa16.14■□□□□ 0.17
PRPF40B-209ENST00000548825 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
PRPF40B-209ENST00000548825 PDLIM2Q96JY6 352 aa16.13■□□□□ 0.17
PRPF40B-209ENST00000548825 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
PRPF40B-209ENST00000548825 RGPD2P0DJD1 1756 aa16.13■□□□□ 0.17
PRPF40B-209ENST00000548825 PLBD2Q8NHP8 589 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 TOPAZ1Q8N9V7 1692 aa16.12■□□□□ 0.17
PRPF40B-209ENST00000548825 CPLX1O14810 134 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms