RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 BBOX1O75936 387 aa12.33□□□□□ -0.44
SSH1-205ENST00000546812 NTSR2O95665 410 aa12.33□□□□□ -0.44
SSH1-205ENST00000546812 ZNF157P51786 506 aaPredicted RBP12.33□□□□□ -0.44
SSH1-205ENST00000546812 TAF7Q15545 349 aaPredicted RBP12.33□□□□□ -0.44
SSH1-205ENST00000546812 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
SSH1-205ENST00000546812 SP8Q8IXZ3 490 aa12.33□□□□□ -0.44
SSH1-205ENST00000546812 MPNDQ8N594 471 aa12.33□□□□□ -0.44
SSH1-205ENST00000546812 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
SSH1-205ENST00000546812 DCTN1Q14203 1278 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 SLC10A5Q5PT55 438 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 KRT26Q7Z3Y9 468 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 DPF2Q92785 391 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 CSRNP1Q96S65 589 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 HPS5Q9UPZ3 1129 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 RRP7AQ9Y3A4 280 aaKnown RBP12.32□□□□□ -0.44
SSH1-205ENST00000546812 ABCC4O15439 1325 aa12.32□□□□□ -0.44
SSH1-205ENST00000546812 YDJCA8MPS7 323 aa12.31□□□□□ -0.44
SSH1-205ENST00000546812 SLC10A3P09131 477 aa12.31□□□□□ -0.44
SSH1-205ENST00000546812 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
SSH1-205ENST00000546812 PKN2Q16513 984 aaKnown RBP12.31□□□□□ -0.44
SSH1-205ENST00000546812 PARP10Q53GL7 1025 aa12.31□□□□□ -0.44
SSH1-205ENST00000546812 SAMD7Q7Z3H4 446 aa12.31□□□□□ -0.44
SSH1-205ENST00000546812 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
SSH1-205ENST00000546812 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
SSH1-205ENST00000546812 GIGYF2Q6Y7W6 1299 aaKnown RBP12.3□□□□□ -0.44
SSH1-205ENST00000546812 DCPSQ96C86 337 aaKnown RBP12.3□□□□□ -0.44
SSH1-205ENST00000546812 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
SSH1-205ENST00000546812 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
SSH1-205ENST00000546812 ADM5C9JUS6 153 aa12.29□□□□□ -0.44
SSH1-205ENST00000546812 EGFRP00533 1210 aa12.29□□□□□ -0.44
SSH1-205ENST00000546812 MYL6BP14649 208 aa12.29□□□□□ -0.44
SSH1-205ENST00000546812 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
SSH1-205ENST00000546812 UTP14AQ9BVJ6 771 aaKnown RBP12.29□□□□□ -0.44
SSH1-205ENST00000546812 PSMD14O00487 310 aa12.28□□□□□ -0.44
SSH1-205ENST00000546812 PNISRQ8TF01 805 aaKnown RBP12.28□□□□□ -0.44
SSH1-205ENST00000546812 CFAP53Q96M91 514 aa12.28□□□□□ -0.44
SSH1-205ENST00000546812 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
SSH1-205ENST00000546812 MKI67P46013 3256 aaKnown RBP12.27□□□□□ -0.45
SSH1-205ENST00000546812 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
SSH1-205ENST00000546812 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
SSH1-205ENST00000546812 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.45
SSH1-205ENST00000546812 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.45
SSH1-205ENST00000546812 CNGB1Q14028 1251 aaPredicted RBP12.27□□□□□ -0.45
SSH1-205ENST00000546812 RBM26Q5T8P6 1007 aaKnown RBP12.27□□□□□ -0.45
SSH1-205ENST00000546812 GRAPQ13588 217 aa12.26□□□□□ -0.45
SSH1-205ENST00000546812 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
SSH1-205ENST00000546812 HABP4Q5JVS0 413 aaKnown RBP12.26□□□□□ -0.45
SSH1-205ENST00000546812 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
SSH1-205ENST00000546812 TMC4Q7Z404 712 aa12.26□□□□□ -0.45
SSH1-205ENST00000546812 SULF1Q8IWU6 871 aa12.26□□□□□ -0.45
SSH1-205ENST00000546812 GRAPLQ8TC17 118 aaPredicted RBP12.26□□□□□ -0.45
SSH1-205ENST00000546812 HDAC9Q9UKV0 1011 aa12.26□□□□□ -0.45
SSH1-205ENST00000546812 HCLS1P14317 486 aaPredicted RBP12.25□□□□□ -0.45
SSH1-205ENST00000546812 RASAL3Q86YV0 1011 aa12.25□□□□□ -0.45
SSH1-205ENST00000546812 ZNF296Q8WUU4 475 aaPredicted RBP12.25□□□□□ -0.45
SSH1-205ENST00000546812 ERBB4Q15303 1308 aa12.25□□□□□ -0.45
SSH1-205ENST00000546812 FKBP1BP68106 108 aa12.24□□□□□ -0.45
SSH1-205ENST00000546812 KIF4BQ2VIQ3 1234 aa12.24□□□□□ -0.45
SSH1-205ENST00000546812 CDCA5Q96FF9 252 aa12.24□□□□□ -0.45
SSH1-205ENST00000546812 DBNDD1Q9H9R9 158 aa12.24□□□□□ -0.45
SSH1-205ENST00000546812 GGA3Q9NZ52 723 aa12.24□□□□□ -0.45
SSH1-205ENST00000546812 TBC1D8O95759 1140 aa12.23□□□□□ -0.45
SSH1-205ENST00000546812 NOM1Q5C9Z4 860 aaKnown RBP12.23□□□□□ -0.45
SSH1-205ENST00000546812 FBXO46Q6PJ61 603 aaPredicted RBP12.23□□□□□ -0.45
SSH1-205ENST00000546812 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
SSH1-205ENST00000546812 KCNQ5Q9NR82 932 aa12.23□□□□□ -0.45
SSH1-205ENST00000546812 NSFL1CQ9UNZ2 370 aaKnown RBP12.23□□□□□ -0.45
SSH1-205ENST00000546812 NUP98P52948 1817 aa12.23□□□□□ -0.45
SSH1-205ENST00000546812 RTL9Q8NET4 1388 aa12.22□□□□□ -0.45
SSH1-205ENST00000546812 ASTN2O75129 1339 aaPredicted RBP12.22□□□□□ -0.45
SSH1-205ENST00000546812 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
SSH1-205ENST00000546812 PDIA6Q15084 440 aa12.22□□□□□ -0.45
SSH1-205ENST00000546812 NLRP10Q86W26 655 aa12.22□□□□□ -0.45
SSH1-205ENST00000546812 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
SSH1-205ENST00000546812 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
SSH1-205ENST00000546812 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
SSH1-205ENST00000546812 C6orf229H3BNL8 230 aa12.21□□□□□ -0.45
SSH1-205ENST00000546812 GPR25O00155 361 aa12.21□□□□□ -0.45
SSH1-205ENST00000546812 ECE2O60344 883 aa12.21□□□□□ -0.45
SSH1-205ENST00000546812 VIL1P09327 827 aaKnown RBP12.21□□□□□ -0.45
SSH1-205ENST00000546812 DOK7Q18PE1 504 aa12.21□□□□□ -0.45
SSH1-205ENST00000546812 HSP90AB3PQ58FF7 597 aa12.21□□□□□ -0.45
SSH1-205ENST00000546812 TRMT112Q9UI30 125 aaKnown RBP12.21□□□□□ -0.45
SSH1-205ENST00000546812 TM4SF4P48230 202 aa12.2□□□□□ -0.46
SSH1-205ENST00000546812 SCARF1Q14162 830 aa12.2□□□□□ -0.46
SSH1-205ENST00000546812 ANGEL2Q5VTE6 544 aaKnown RBP12.2□□□□□ -0.46
SSH1-205ENST00000546812 EYA3Q99504 573 aa12.2□□□□□ -0.46
SSH1-205ENST00000546812 DUOX1Q9NRD9 1551 aa12.2□□□□□ -0.46
SSH1-205ENST00000546812 HTTP42858 3142 aa12.2□□□□□ -0.46
SSH1-205ENST00000546812 ZNF280AP59817 542 aaPredicted RBP12.19□□□□□ -0.46
SSH1-205ENST00000546812 GPSM2P81274 684 aa12.19□□□□□ -0.46
SSH1-205ENST00000546812 TCIRG1Q13488 830 aa12.19□□□□□ -0.46
SSH1-205ENST00000546812 PROSER3Q2NL68 480 aa12.19□□□□□ -0.46
SSH1-205ENST00000546812 LAMB4A4D0S4 1761 aa12.18□□□□□ -0.46
SSH1-205ENST00000546812 AKAP11Q9UKA4 1901 aa12.18□□□□□ -0.46
SSH1-205ENST00000546812 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
SSH1-205ENST00000546812 FKTNO75072 461 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms