RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 BACH2Q9BYV9 841 aa10.44□□□□□ -0.74
LEMD3-206ENST00000545026 CHRDQ9H2X0 955 aa10.44□□□□□ -0.74
LEMD3-206ENST00000545026 CNTN3Q9P232 1028 aa10.44□□□□□ -0.74
LEMD3-206ENST00000545026 KHNYNO15037 678 aaKnown RBP10.43□□□□□ -0.74
LEMD3-206ENST00000545026 MAPTP10636 758 aaKnown RBP10.43□□□□□ -0.74
LEMD3-206ENST00000545026 TCF3P15923 654 aa10.43□□□□□ -0.74
LEMD3-206ENST00000545026 GNA15P30679 374 aa10.43□□□□□ -0.74
LEMD3-206ENST00000545026 LAMC2Q13753 1193 aa10.43□□□□□ -0.74
LEMD3-206ENST00000545026 TSNAXIP1Q2TAA8 658 aa10.43□□□□□ -0.74
LEMD3-206ENST00000545026 GSX2Q9BZM3 304 aa10.43□□□□□ -0.74
LEMD3-206ENST00000545026 STRN4Q9NRL3 753 aa10.43□□□□□ -0.74
LEMD3-206ENST00000545026 ABI2Q9NYB9 513 aaPredicted RBP10.43□□□□□ -0.74
LEMD3-206ENST00000545026 BNIP3LO60238 219 aa10.42□□□□□ -0.74
LEMD3-206ENST00000545026 SORBS3O60504 671 aa10.42□□□□□ -0.74
LEMD3-206ENST00000545026 SASH3O75995 380 aa10.42□□□□□ -0.74
LEMD3-206ENST00000545026 CCINQ13939 588 aa10.42□□□□□ -0.74
LEMD3-206ENST00000545026 C1orf127Q8N9H9 656 aa10.42□□□□□ -0.74
LEMD3-206ENST00000545026 CCDC74AQ96AQ1 378 aa10.42□□□□□ -0.74
LEMD3-206ENST00000545026 ZNF837Q96EG3 531 aaPredicted RBP10.42□□□□□ -0.74
LEMD3-206ENST00000545026 MRS2Q9HD23 443 aa10.42□□□□□ -0.74
LEMD3-206ENST00000545026 SNRPBP14678 240 aaKnown RBP10.41□□□□□ -0.74
LEMD3-206ENST00000545026 ITGA6P23229 1130 aa10.41□□□□□ -0.74
LEMD3-206ENST00000545026 GRIN2CQ14957 1233 aa10.41□□□□□ -0.74
LEMD3-206ENST00000545026 GMCL1Q96IK5 515 aa10.41□□□□□ -0.74
LEMD3-206ENST00000545026 FRMD6Q96NE9 622 aa10.41□□□□□ -0.74
LEMD3-206ENST00000545026 EREGO14944 169 aa10.4□□□□□ -0.74
LEMD3-206ENST00000545026 TARSP26639 723 aaKnown RBP10.4□□□□□ -0.74
LEMD3-206ENST00000545026 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.4□□□□□ -0.74
LEMD3-206ENST00000545026 EPS8L3Q8TE67 593 aaKnown RBP10.4□□□□□ -0.74
LEMD3-206ENST00000545026 MARK1Q9P0L2 795 aa10.4□□□□□ -0.74
LEMD3-206ENST00000545026 AK5Q9Y6K8 562 aa10.4□□□□□ -0.74
LEMD3-206ENST00000545026 POLR3DP05423 398 aaPredicted RBP10.39□□□□□ -0.75
LEMD3-206ENST00000545026 IRS1P35568 1242 aa10.39□□□□□ -0.75
LEMD3-206ENST00000545026 ITGAEP38570 1179 aa10.39□□□□□ -0.75
LEMD3-206ENST00000545026 TTC39BQ5VTQ0 682 aaPredicted RBP10.39□□□□□ -0.75
LEMD3-206ENST00000545026 PI16Q6UXB8 463 aa10.39□□□□□ -0.75
LEMD3-206ENST00000545026 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
LEMD3-206ENST00000545026 VTI1BQ9UEU0 232 aa10.39□□□□□ -0.75
LEMD3-206ENST00000545026 KRT25Q7Z3Z0 450 aa10.38□□□□□ -0.75
LEMD3-206ENST00000545026 GALNT12Q8IXK2 581 aa10.38□□□□□ -0.75
LEMD3-206ENST00000545026 PMEPA1Q969W9 287 aa10.38□□□□□ -0.75
LEMD3-206ENST00000545026 GTPBP3Q969Y2 492 aaKnown RBP10.38□□□□□ -0.75
LEMD3-206ENST00000545026 ZFATQ9P243 1243 aa10.38□□□□□ -0.75
LEMD3-206ENST00000545026 SPG7Q9UQ90 795 aa10.38□□□□□ -0.75
LEMD3-206ENST00000545026 LCE2BO14633 110 aa10.37□□□□□ -0.75
LEMD3-206ENST00000545026 MMP20O60882 483 aa10.37□□□□□ -0.75
LEMD3-206ENST00000545026 CYP2E1P05181 493 aaPredicted RBP10.37□□□□□ -0.75
LEMD3-206ENST00000545026 CES1P23141 567 aa10.37□□□□□ -0.75
LEMD3-206ENST00000545026 SPEM2Q0P670 501 aa10.37□□□□□ -0.75
LEMD3-206ENST00000545026 SLC30A3Q99726 388 aa10.37□□□□□ -0.75
LEMD3-206ENST00000545026 ATXN7L1Q9ULK2 861 aaPredicted RBP10.37□□□□□ -0.75
LEMD3-206ENST00000545026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.37□□□□□ -0.75
LEMD3-206ENST00000545026 SCAMP3O14828 347 aaKnown RBP10.36□□□□□ -0.75
LEMD3-206ENST00000545026 CD33P20138 364 aa10.36□□□□□ -0.75
LEMD3-206ENST00000545026 VEGFBP49765 207 aa10.36□□□□□ -0.75
LEMD3-206ENST00000545026 OR13H1Q8NG92 308 aa10.36□□□□□ -0.75
LEMD3-206ENST00000545026 OSBPL7Q9BZF2 842 aa10.36□□□□□ -0.75
LEMD3-206ENST00000545026 NPHS2Q9NP85 383 aa10.36□□□□□ -0.75
LEMD3-206ENST00000545026 NLRP2Q9NX02 1062 aa10.36□□□□□ -0.75
LEMD3-206ENST00000545026 PPFIA3O75145 1194 aa10.35□□□□□ -0.75
LEMD3-206ENST00000545026 CTSHP09668 335 aa10.35□□□□□ -0.75
LEMD3-206ENST00000545026 RARAP10276 462 aa10.35□□□□□ -0.75
LEMD3-206ENST00000545026 TMEM87AQ8NBN3 555 aa10.35□□□□□ -0.75
LEMD3-206ENST00000545026 EFCC1Q9HA90 598 aa10.35□□□□□ -0.75
LEMD3-206ENST00000545026 C11orf95C9JLR9 678 aaPredicted RBP10.34□□□□□ -0.75
LEMD3-206ENST00000545026 GIPC1O14908 333 aa10.34□□□□□ -0.75
LEMD3-206ENST00000545026 MAP3K6O95382 1288 aa10.34□□□□□ -0.75
LEMD3-206ENST00000545026 NFKB1P19838 968 aa10.34□□□□□ -0.75
LEMD3-206ENST00000545026 FAM182BQ5T319 152 aa10.34□□□□□ -0.75
LEMD3-206ENST00000545026 KANSL3Q9P2N6 904 aa10.34□□□□□ -0.75
LEMD3-206ENST00000545026 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.34□□□□□ -0.75
LEMD3-206ENST00000545026 EIF4BP23588 611 aaKnown RBP10.33□□□□□ -0.76
LEMD3-206ENST00000545026 PNMA5Q96PV4 448 aa10.33□□□□□ -0.76
LEMD3-206ENST00000545026 C12orf49Q9H741 205 aa10.33□□□□□ -0.76
LEMD3-206ENST00000545026 TLR7Q9NYK1 1049 aaKnown RBP10.33□□□□□ -0.76
LEMD3-206ENST00000545026 SALL4Q9UJQ4 1053 aa10.33□□□□□ -0.76
LEMD3-206ENST00000545026 PHF24Q9UPV7 400 aa10.33□□□□□ -0.76
LEMD3-206ENST00000545026 FGFR3P22607 806 aa10.32□□□□□ -0.76
LEMD3-206ENST00000545026 HDLBPQ00341 1268 aaKnown RBP10.32□□□□□ -0.76
LEMD3-206ENST00000545026 Q6ZNB5 142 aa10.32□□□□□ -0.76
LEMD3-206ENST00000545026 RAB44Q7Z6P3 723 aaPredicted RBP10.32□□□□□ -0.76
LEMD3-206ENST00000545026 BHMTQ93088 406 aa10.32□□□□□ -0.76
LEMD3-206ENST00000545026 CRELD1Q96HD1 420 aa10.32□□□□□ -0.76
LEMD3-206ENST00000545026 PHF20L1A8MW92 1017 aa10.31□□□□□ -0.76
LEMD3-206ENST00000545026 GPR25O00155 361 aa10.31□□□□□ -0.76
LEMD3-206ENST00000545026 GADD45BO75293 160 aaPredicted RBP10.31□□□□□ -0.76
LEMD3-206ENST00000545026 HOXD8P13378 290 aaPredicted RBP10.31□□□□□ -0.76
LEMD3-206ENST00000545026 SOX18P35713 384 aa10.31□□□□□ -0.76
LEMD3-206ENST00000545026 CTBSQ01459 385 aa10.31□□□□□ -0.76
LEMD3-206ENST00000545026 PEAR1Q5VY43 1037 aaPredicted RBP10.31□□□□□ -0.76
LEMD3-206ENST00000545026 VWA5B2Q8N398 1253 aa10.31□□□□□ -0.76
LEMD3-206ENST00000545026 BCO2Q9BYV7 579 aa10.31□□□□□ -0.76
LEMD3-206ENST00000545026 LATS2Q9NRM7 1088 aa10.31□□□□□ -0.76
LEMD3-206ENST00000545026 A0A1W2PP55 124 aa10.3□□□□□ -0.76
LEMD3-206ENST00000545026 PSAPP07602 524 aa10.3□□□□□ -0.76
LEMD3-206ENST00000545026 EDN3P14138 238 aa10.3□□□□□ -0.76
LEMD3-206ENST00000545026 COL13A1Q5TAT6 717 aaPredicted RBP10.3□□□□□ -0.76
LEMD3-206ENST00000545026 KIAA0319Q5VV43 1072 aa10.3□□□□□ -0.76
LEMD3-206ENST00000545026 NXPE4Q6UWF7 544 aa10.3□□□□□ -0.76
LEMD3-206ENST00000545026 NANOS1Q8WY41 292 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 283.9 ms