RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 KIF6Q6ZMV9 814 aa21.19■□□□□ 0.98
DDX55-212ENST00000544738 CCDC146Q8IYE0 955 aa21.19■□□□□ 0.98
DDX55-212ENST00000544738 ZC3H15Q8WU90 426 aaKnown RBP21.19■□□□□ 0.98
DDX55-212ENST00000544738 MAP3K15Q6ZN16 1313 aa21.19■□□□□ 0.98
DDX55-212ENST00000544738 RAD17O75943 681 aa21.18■□□□□ 0.98
DDX55-212ENST00000544738 MYL6BP14649 208 aa21.18■□□□□ 0.98
DDX55-212ENST00000544738 PRPF38BQ5VTL8 546 aaKnown RBP21.18■□□□□ 0.98
DDX55-212ENST00000544738 DLK2Q6UY11 383 aa21.18■□□□□ 0.98
DDX55-212ENST00000544738 ADAMTS8Q9UP79 889 aa21.18■□□□□ 0.98
DDX55-212ENST00000544738 ZEB1P37275 1124 aaPredicted RBP21.17■□□□□ 0.98
DDX55-212ENST00000544738 SUSD4Q5VX71 490 aa21.17■□□□□ 0.98
DDX55-212ENST00000544738 TRPM4Q8TD43 1214 aa21.17■□□□□ 0.98
DDX55-212ENST00000544738 VPS33BQ9H267 617 aa21.17■□□□□ 0.98
DDX55-212ENST00000544738 TRPA1O75762 1119 aa21.16■□□□□ 0.98
DDX55-212ENST00000544738 C3orf67Q6ZVT6 689 aa21.16■□□□□ 0.98
DDX55-212ENST00000544738 SUPT20HQ8NEM7 779 aa21.16■□□□□ 0.98
DDX55-212ENST00000544738 CNOT7Q9UIV1 285 aaKnown RBP21.16■□□□□ 0.98
DDX55-212ENST00000544738 ATP6V0A2Q9Y487 856 aa21.16■□□□□ 0.98
DDX55-212ENST00000544738 KIF23Q02241 960 aaPredicted RBP21.15■□□□□ 0.98
DDX55-212ENST00000544738 TNIP1Q15025 636 aa21.15■□□□□ 0.98
DDX55-212ENST00000544738 RGMBQ6NW40 437 aa21.15■□□□□ 0.98
DDX55-212ENST00000544738 TTLL7Q6ZT98 887 aa21.15■□□□□ 0.98
DDX55-212ENST00000544738 SHTN1A0MZ66 631 aa21.14■□□□□ 0.97
DDX55-212ENST00000544738 H7C1D1 291 aa21.14■□□□□ 0.97
DDX55-212ENST00000544738 EIF2S2P20042 333 aaKnown RBP21.14■□□□□ 0.97
DDX55-212ENST00000544738 NLRP3Q96P20 1036 aa21.14■□□□□ 0.97
DDX55-212ENST00000544738 ZBTB3Q9H5J0 574 aa21.14■□□□□ 0.97
DDX55-212ENST00000544738 TRIM35Q9UPQ4 493 aa21.14■□□□□ 0.97
DDX55-212ENST00000544738 UBN2Q6ZU65 1347 aa21.13■□□□□ 0.97
DDX55-212ENST00000544738 CHL1O00533 1208 aa21.13■□□□□ 0.97
DDX55-212ENST00000544738 DPP8Q6V1X1 898 aaPredicted RBP21.13■□□□□ 0.97
DDX55-212ENST00000544738 GIGYF2Q6Y7W6 1299 aaKnown RBP21.13■□□□□ 0.97
DDX55-212ENST00000544738 RNF186Q9NXI6 227 aa21.13■□□□□ 0.97
DDX55-212ENST00000544738 SAGE1Q9NXZ1 904 aa21.13■□□□□ 0.97
DDX55-212ENST00000544738 FAM155AB1AL88 458 aaPredicted RBP21.12■□□□□ 0.97
DDX55-212ENST00000544738 ZNF157P51786 506 aaPredicted RBP21.12■□□□□ 0.97
DDX55-212ENST00000544738 C2orf69Q8N8R5 385 aa21.12■□□□□ 0.97
DDX55-212ENST00000544738 CCDC102AQ96A19 550 aa21.12■□□□□ 0.97
DDX55-212ENST00000544738 NUP98P52948 1817 aa21.11■□□□□ 0.97
DDX55-212ENST00000544738 PDIA6Q15084 440 aa21.11■□□□□ 0.97
DDX55-212ENST00000544738 MPNDQ8N594 471 aa21.11■□□□□ 0.97
DDX55-212ENST00000544738 RTFDC1Q9BY42 306 aaPredicted RBP21.11■□□□□ 0.97
DDX55-212ENST00000544738 GBA2Q9HCG7 927 aaPredicted RBP21.11■□□□□ 0.97
DDX55-212ENST00000544738 LAS1LQ9Y4W2 734 aaKnown RBP21.11■□□□□ 0.97
DDX55-212ENST00000544738 IBTKQ9P2D0 1353 aaPredicted RBP21.1■□□□□ 0.97
DDX55-212ENST00000544738 CDHR2Q9BYE9 1310 aa21.1■□□□□ 0.97
DDX55-212ENST00000544738 NTSR2O95665 410 aa21.1■□□□□ 0.97
DDX55-212ENST00000544738 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
DDX55-212ENST00000544738 PPP1R42Q7Z4L9 355 aa21.1■□□□□ 0.97
DDX55-212ENST00000544738 CTU1Q7Z7A3 348 aaKnown RBP21.1■□□□□ 0.97
DDX55-212ENST00000544738 MICALL2Q8IY33 904 aa21.1■□□□□ 0.97
DDX55-212ENST00000544738 ZNF34Q8IZ26 560 aa21.1■□□□□ 0.97
DDX55-212ENST00000544738 RIC1Q4ADV7 1423 aa21.1■□□□□ 0.97
DDX55-212ENST00000544738 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
DDX55-212ENST00000544738 PARP10Q53GL7 1025 aa21.09■□□□□ 0.97
DDX55-212ENST00000544738 SAMD7Q7Z3H4 446 aa21.09■□□□□ 0.97
DDX55-212ENST00000544738 LRP10Q7Z4F1 713 aa21.09■□□□□ 0.97
DDX55-212ENST00000544738 ZBTB12Q9Y330 459 aaPredicted RBP21.09■□□□□ 0.97
DDX55-212ENST00000544738 ABCC4O15439 1325 aa21.08■□□□□ 0.97
DDX55-212ENST00000544738 BBOX1O75936 387 aa21.08■□□□□ 0.97
DDX55-212ENST00000544738 RBM26Q5T8P6 1007 aaKnown RBP21.08■□□□□ 0.97
DDX55-212ENST00000544738 SP8Q8IXZ3 490 aa21.08■□□□□ 0.97
DDX55-212ENST00000544738 HOXB7P09629 217 aa21.07■□□□□ 0.96
DDX55-212ENST00000544738 TBC1D10BQ4KMP7 808 aaPredicted RBP21.07■□□□□ 0.96
DDX55-212ENST00000544738 CSRNP1Q96S65 589 aa21.07■□□□□ 0.96
DDX55-212ENST00000544738 YDJCA8MPS7 323 aa21.06■□□□□ 0.96
DDX55-212ENST00000544738 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
DDX55-212ENST00000544738 PROSER3Q2NL68 480 aa21.06■□□□□ 0.96
DDX55-212ENST00000544738 DCPSQ96C86 337 aaKnown RBP21.06■□□□□ 0.96
DDX55-212ENST00000544738 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
DDX55-212ENST00000544738 ADM5C9JUS6 153 aa21.05■□□□□ 0.96
DDX55-212ENST00000544738 ANXA1P04083 346 aa21.05■□□□□ 0.96
DDX55-212ENST00000544738 HSP90AB3PQ58FF7 597 aa21.05■□□□□ 0.96
DDX55-212ENST00000544738 COPS6Q7L5N1 327 aa21.05■□□□□ 0.96
DDX55-212ENST00000544738 NECTIN2Q92692 538 aa21.05■□□□□ 0.96
DDX55-212ENST00000544738 HPS5Q9UPZ3 1129 aa21.05■□□□□ 0.96
DDX55-212ENST00000544738 APAF1O14727 1248 aa21.04■□□□□ 0.96
DDX55-212ENST00000544738 SLC10A5Q5PT55 438 aa21.04■□□□□ 0.96
DDX55-212ENST00000544738 PSMD14O00487 310 aa21.03■□□□□ 0.96
DDX55-212ENST00000544738 EGFRP00533 1210 aa21.03■□□□□ 0.96
DDX55-212ENST00000544738 AIMP1Q12904 312 aaKnown RBP21.03■□□□□ 0.96
DDX55-212ENST00000544738 KRT24Q2M2I5 525 aa21.03■□□□□ 0.96
DDX55-212ENST00000544738 HDGFL1Q5TGJ6 251 aa21.03■□□□□ 0.96
DDX55-212ENST00000544738 XAGE3Q8WTP9 111 aa21.03■□□□□ 0.96
DDX55-212ENST00000544738 DPF2Q92785 391 aa21.03■□□□□ 0.96
DDX55-212ENST00000544738 HCLS1P14317 486 aaPredicted RBP21.02■□□□□ 0.96
DDX55-212ENST00000544738 DDX46Q7L014 1031 aaKnown RBP21.02■□□□□ 0.96
DDX55-212ENST00000544738 DBF4Q9UBU7 674 aaPredicted RBP21.02■□□□□ 0.96
DDX55-212ENST00000544738 HDAC9Q9UKV0 1011 aa21.02■□□□□ 0.96
DDX55-212ENST00000544738 SLC10A3P09131 477 aa21.01■□□□□ 0.95
DDX55-212ENST00000544738 ZNF853P0CG23 659 aa21.01■□□□□ 0.95
DDX55-212ENST00000544738 GNAI1P63096 354 aa21.01■□□□□ 0.95
DDX55-212ENST00000544738 MBIPQ9NS73 344 aa21.01■□□□□ 0.95
DDX55-212ENST00000544738 IFT57Q9NWB7 429 aa21.01■□□□□ 0.95
DDX55-212ENST00000544738 CHPF2Q9P2E5 772 aa21.01■□□□□ 0.95
DDX55-212ENST00000544738 TCIRG1Q13488 830 aa21■□□□□ 0.95
DDX55-212ENST00000544738 DBNDD1Q9H9R9 158 aa21■□□□□ 0.95
DDX55-212ENST00000544738 RIMBP2O15034 1052 aa20.99■□□□□ 0.95
DDX55-212ENST00000544738 WASHC4Q2M389 1173 aa20.99■□□□□ 0.95
DDX55-212ENST00000544738 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms