RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.38
MDH1-216ENST00000544381 E2F4Q16254 413 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 DMRTA1Q5VZB9 504 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 SMIM5Q71RC9 77 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 G2E3Q7L622 706 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 FMNL2Q96PY5 1086 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 HEG1Q9ULI3 1381 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
MDH1-216ENST00000544381 ADGRD1Q6QNK2 874 aa12.64□□□□□ -0.39
MDH1-216ENST00000544381 RNF166Q96A37 237 aaPredicted RBP12.64□□□□□ -0.39
MDH1-216ENST00000544381 RWDD1Q9H446 243 aaPredicted RBP12.64□□□□□ -0.39
MDH1-216ENST00000544381 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
MDH1-216ENST00000544381 CHPF2Q9P2E5 772 aa12.64□□□□□ -0.39
MDH1-216ENST00000544381 DBF4Q9UBU7 674 aaPredicted RBP12.64□□□□□ -0.39
MDH1-216ENST00000544381 PALLDQ8WX93 1383 aa12.64□□□□□ -0.39
MDH1-216ENST00000544381 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
MDH1-216ENST00000544381 SLC4A10Q6U841 1118 aa12.63□□□□□ -0.39
MDH1-216ENST00000544381 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
MDH1-216ENST00000544381 ZBTB40Q9NUA8 1239 aa12.63□□□□□ -0.39
MDH1-216ENST00000544381 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
MDH1-216ENST00000544381 CD2APQ9Y5K6 639 aa12.63□□□□□ -0.39
MDH1-216ENST00000544381 KDM2BQ8NHM5 1336 aa12.63□□□□□ -0.39
MDH1-216ENST00000544381 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
MDH1-216ENST00000544381 TK2O00142 265 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
MDH1-216ENST00000544381 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
MDH1-216ENST00000544381 PRAMEF22A3QJZ6 481 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 F6X3S4 739 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 IGHDP01880 384 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 HSPA6P17066 643 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 PTPREP23469 700 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 ADAM33Q9BZ11 813 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 PHAXQ9H814 394 aaKnown RBP12.62□□□□□ -0.39
MDH1-216ENST00000544381 HYPKQ9NX55 129 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 PCDHGA10Q9Y5H3 936 aa12.62□□□□□ -0.39
MDH1-216ENST00000544381 N4BP2Q86UW6 1770 aaPredicted RBP12.61□□□□□ -0.39
MDH1-216ENST00000544381 DDX21Q9NR30 783 aaKnown RBP eCLIP12.61□□□□□ -0.394e-6■□□□□ 11.2
MDH1-216ENST00000544381 WWC3Q9ULE0 1092 aa12.61□□□□□ -0.39
MDH1-216ENST00000544381 ZNF526Q8TF50 670 aaPredicted RBP12.6□□□□□ -0.39
MDH1-216ENST00000544381 GPBP1L1Q9HC44 474 aaPredicted RBP12.6□□□□□ -0.39
MDH1-216ENST00000544381 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
MDH1-216ENST00000544381 PCNTO95613 3336 aa12.59□□□□□ -0.39
MDH1-216ENST00000544381 PHF14O94880 888 aa12.59□□□□□ -0.39
MDH1-216ENST00000544381 DDX58O95786 925 aaKnown RBP12.59□□□□□ -0.39
MDH1-216ENST00000544381 ANXA1P04083 346 aa12.59□□□□□ -0.39
MDH1-216ENST00000544381 HDAC1Q13547 482 aaPredicted RBP12.59□□□□□ -0.39
MDH1-216ENST00000544381 PIGBQ92521 554 aa12.59□□□□□ -0.39
MDH1-216ENST00000544381 USP16Q9Y5T5 823 aa12.59□□□□□ -0.39
MDH1-216ENST00000544381 COL5A3P25940 1745 aaPredicted RBP12.58□□□□□ -0.4
MDH1-216ENST00000544381 UBR2Q8IWV8 1755 aa12.58□□□□□ -0.4
MDH1-216ENST00000544381 PTCD1O75127 700 aaKnown RBP12.58□□□□□ -0.4
MDH1-216ENST00000544381 PROSER3Q2NL68 480 aa12.58□□□□□ -0.4
MDH1-216ENST00000544381 TYW1BQ6NUM6 668 aa12.58□□□□□ -0.4
MDH1-216ENST00000544381 LINC00116Q8NCU8 138 aa12.58□□□□□ -0.4
MDH1-216ENST00000544381 FBXW7Q969H0 707 aa12.58□□□□□ -0.4
MDH1-216ENST00000544381 LAMB4A4D0S4 1761 aa12.57□□□□□ -0.4
MDH1-216ENST00000544381 C4AP0C0L4 1744 aa12.57□□□□□ -0.4
MDH1-216ENST00000544381 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.57□□□□□ -0.4
MDH1-216ENST00000544381 SPDYE16A6NNV3 312 aaPredicted RBP12.57□□□□□ -0.4
MDH1-216ENST00000544381 MYL6BP14649 208 aa12.57□□□□□ -0.4
MDH1-216ENST00000544381 DNAAF4Q8WXU2 420 aa12.57□□□□□ -0.4
MDH1-216ENST00000544381 C1orf115Q9H7X2 142 aa12.57□□□□□ -0.4
MDH1-216ENST00000544381 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
MDH1-216ENST00000544381 ZNF831Q5JPB2 1677 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 MYH14Q7Z406 1995 aaKnown RBP12.56□□□□□ -0.4
MDH1-216ENST00000544381 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 GNAI3P08754 354 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 AIMP1Q12904 312 aaKnown RBP12.56□□□□□ -0.4
MDH1-216ENST00000544381 ITPK1Q13572 414 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 PDIA6Q15084 440 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 FLAD1Q8NFF5 587 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 MEIS3Q99687 375 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
MDH1-216ENST00000544381 SRCIN1Q9C0H9 1055 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 ERBB4Q15303 1308 aa12.56□□□□□ -0.4
MDH1-216ENST00000544381 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
MDH1-216ENST00000544381 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
MDH1-216ENST00000544381 DDX12PQ92771 950 aa12.55□□□□□ -0.4
MDH1-216ENST00000544381 EPAS1Q99814 870 aa12.55□□□□□ -0.4
MDH1-216ENST00000544381 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
MDH1-216ENST00000544381 ARIH1Q9Y4X5 557 aaPredicted RBP12.55□□□□□ -0.4
MDH1-216ENST00000544381 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 C10orf71Q711Q0 1435 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 HRO43593 1189 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 RPAP2Q8IXW5 612 aaPredicted RBP12.54□□□□□ -0.4
MDH1-216ENST00000544381 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 XAGE3Q8WTP9 111 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 AK7Q96M32 723 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 VPS9D1Q9Y2B5 631 aa12.54□□□□□ -0.4
MDH1-216ENST00000544381 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
MDH1-216ENST00000544381 STARD3NLO95772 234 aa12.53□□□□□ -0.4
MDH1-216ENST00000544381 GNAI2P04899 355 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms