RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 HAUS7Q99871 368 aa21.22■□□□□ 0.99
SCARB1-208ENST00000544327 GPR108Q9NPR9 543 aa21.22■□□□□ 0.99
SCARB1-208ENST00000544327 CWC25Q9NXE8 425 aaPredicted RBP21.22■□□□□ 0.99
SCARB1-208ENST00000544327 ATP6V1DQ9Y5K8 247 aa21.22■□□□□ 0.99
SCARB1-208ENST00000544327 TAF5LO75529 589 aa21.21■□□□□ 0.99
SCARB1-208ENST00000544327 F13A1P00488 732 aa21.21■□□□□ 0.99
SCARB1-208ENST00000544327 ST3GAL1Q11201 340 aa21.21■□□□□ 0.99
SCARB1-208ENST00000544327 ANKRD1Q15327 319 aa21.21■□□□□ 0.99
SCARB1-208ENST00000544327 USP48Q86UV5 1035 aa21.21■□□□□ 0.99
SCARB1-208ENST00000544327 LMBR1LQ6UX01 489 aa21.2■□□□□ 0.98
SCARB1-208ENST00000544327 CCDC83Q8IWF9 413 aa21.2■□□□□ 0.98
SCARB1-208ENST00000544327 SLAIN2Q9P270 581 aa21.2■□□□□ 0.98
SCARB1-208ENST00000544327 TOGARAM1Q9Y4F4 1720 aa21.2■□□□□ 0.98
SCARB1-208ENST00000544327 ME3Q16798 604 aa21.2■□□□□ 0.98
SCARB1-208ENST00000544327 KLHL34Q8N239 644 aa21.2■□□□□ 0.98
SCARB1-208ENST00000544327 CCDC191Q8NCU4 936 aa21.2■□□□□ 0.98
SCARB1-208ENST00000544327 SYCE3A1L190 88 aa21.19■□□□□ 0.98
SCARB1-208ENST00000544327 GJB2P29033 226 aa21.19■□□□□ 0.98
SCARB1-208ENST00000544327 TTLL7Q6ZT98 887 aa21.19■□□□□ 0.98
SCARB1-208ENST00000544327 ZNF589Q86UQ0 364 aaPredicted RBP21.19■□□□□ 0.98
SCARB1-208ENST00000544327 LARP6Q9BRS8 491 aaKnown RBP21.19■□□□□ 0.98
SCARB1-208ENST00000544327 NHSL1Q5SYE7 1610 aa21.19■□□□□ 0.98
SCARB1-208ENST00000544327 TCHHQ07283 1943 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 PHF14O94880 888 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 RPS6KB1P23443 525 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 BLOC1S2Q6QNY1 142 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 PDLIM2Q96JY6 352 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 DBNDD2Q9BQY9 259 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 ATG3Q9NT62 314 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 MTMR6Q9Y217 621 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 PALLDQ8WX93 1383 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 KRT32Q14532 448 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 HS1BP3Q53T59 392 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 ATG9AQ7Z3C6 839 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 TPCN1Q9ULQ1 816 aa21.18■□□□□ 0.98
SCARB1-208ENST00000544327 ZNF609O15014 1411 aa21.17■□□□□ 0.98
SCARB1-208ENST00000544327 GADD45BO75293 160 aaPredicted RBP21.17■□□□□ 0.98
SCARB1-208ENST00000544327 SPEF2Q9C093 1822 aa21.17■□□□□ 0.98
SCARB1-208ENST00000544327 A1BGP04217 495 aa21.16■□□□□ 0.98
SCARB1-208ENST00000544327 IL15P40933 162 aaPredicted RBP21.16■□□□□ 0.98
SCARB1-208ENST00000544327 EDC3Q96F86 508 aaKnown RBP21.16■□□□□ 0.98
SCARB1-208ENST00000544327 SH3TC1Q8TE82 1336 aa21.16■□□□□ 0.98
SCARB1-208ENST00000544327 CIAO1O76071 339 aa21.15■□□□□ 0.98
SCARB1-208ENST00000544327 PRKCSHP14314 528 aaPredicted RBP21.15■□□□□ 0.98
SCARB1-208ENST00000544327 CSPP1Q1MSJ5 1256 aa21.15■□□□□ 0.98
SCARB1-208ENST00000544327 CNPY2Q9Y2B0 182 aa21.15■□□□□ 0.98
SCARB1-208ENST00000544327 U3KPZ7 1027 aaPredicted RBP21.15■□□□□ 0.98
SCARB1-208ENST00000544327 UBE2HP62256 183 aa21.15■□□□□ 0.98
SCARB1-208ENST00000544327 KBTBD3Q8NAB2 608 aa21.15■□□□□ 0.98
SCARB1-208ENST00000544327 ISCA1Q9BUE6 129 aa21.15■□□□□ 0.98
SCARB1-208ENST00000544327 GDPD2Q9HCC8 539 aa21.15■□□□□ 0.98
SCARB1-208ENST00000544327 MCMDC2Q4G0Z9 681 aa21.14■□□□□ 0.97
SCARB1-208ENST00000544327 TOB2Q14106 344 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-208ENST00000544327 TSPY26PQ9H489 355 aa21.13■□□□□ 0.97
SCARB1-208ENST00000544327 EYA2O00167 538 aa21.13■□□□□ 0.97
SCARB1-208ENST00000544327 TRIM28Q13263 835 aaKnown RBP21.13■□□□□ 0.97
SCARB1-208ENST00000544327 CCDC183Q5T5S1 534 aa21.13■□□□□ 0.97
SCARB1-208ENST00000544327 LETM1O95202 739 aaPredicted RBP21.12■□□□□ 0.97
SCARB1-208ENST00000544327 PDCP20941 246 aa21.12■□□□□ 0.97
SCARB1-208ENST00000544327 FOXD4L6Q3SYB3 417 aaPredicted RBP21.12■□□□□ 0.97
SCARB1-208ENST00000544327 FOXD4L3Q6VB84 417 aaPredicted RBP21.12■□□□□ 0.97
SCARB1-208ENST00000544327 VSIG10Q8N0Z9 540 aa21.12■□□□□ 0.97
SCARB1-208ENST00000544327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.12■□□□□ 0.97
SCARB1-208ENST00000544327 FBXO3Q9UK99 471 aa21.12■□□□□ 0.97
SCARB1-208ENST00000544327 TAF6LQ9Y6J9 622 aa21.12■□□□□ 0.97
SCARB1-208ENST00000544327 NECAB1Q8N987 351 aa21.11■□□□□ 0.97
SCARB1-208ENST00000544327 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
SCARB1-208ENST00000544327 DNAJC2Q99543 621 aaKnown RBP21.11■□□□□ 0.97
SCARB1-208ENST00000544327 TEX13AQ9BXU3 409 aaPredicted RBP21.11■□□□□ 0.97
SCARB1-208ENST00000544327 HELLSQ9NRZ9 838 aa21.11■□□□□ 0.97
SCARB1-208ENST00000544327 CHMP3Q9Y3E7 222 aa21.11■□□□□ 0.97
SCARB1-208ENST00000544327 COL9A3Q14050 684 aaPredicted RBP21.11■□□□□ 0.97
SCARB1-208ENST00000544327 ZSCAN30Q86W11 494 aa21.11■□□□□ 0.97
SCARB1-208ENST00000544327 ZBTB3Q9H5J0 574 aa21.11■□□□□ 0.97
SCARB1-208ENST00000544327 TCIRG1Q13488 830 aa21.1■□□□□ 0.97
SCARB1-208ENST00000544327 EVA1CP58658 441 aa21.09■□□□□ 0.97
SCARB1-208ENST00000544327 NEK1Q96PY6 1258 aa21.09■□□□□ 0.97
SCARB1-208ENST00000544327 PLA2G12BQ9BX93 195 aa21.09■□□□□ 0.97
SCARB1-208ENST00000544327 PAG1Q9NWQ8 432 aa21.09■□□□□ 0.97
SCARB1-208ENST00000544327 TMOD3Q9NYL9 352 aa21.09■□□□□ 0.97
SCARB1-208ENST00000544327 ZNF335Q9H4Z2 1342 aaPredicted RBP21.09■□□□□ 0.97
SCARB1-208ENST00000544327 DDX46Q7L014 1031 aaKnown RBP21.08■□□□□ 0.97
SCARB1-208ENST00000544327 FAM184AQ8NB25 1140 aa21.08■□□□□ 0.97
SCARB1-208ENST00000544327 DSCC1Q9BVC3 393 aa21.08■□□□□ 0.97
SCARB1-208ENST00000544327 LARP1BQ659C4 914 aaKnown RBP21.08■□□□□ 0.96
SCARB1-208ENST00000544327 STRN4Q9NRL3 753 aa21.08■□□□□ 0.96
SCARB1-208ENST00000544327 NDUFB9Q9Y6M9 179 aa21.08■□□□□ 0.96
SCARB1-208ENST00000544327 LRP6O75581 1613 aa21.08■□□□□ 0.96
SCARB1-208ENST00000544327 UVSSAQ2YD98 709 aa21.07■□□□□ 0.96
SCARB1-208ENST00000544327 ZMYM1Q5SVZ6 1142 aa21.07■□□□□ 0.96
SCARB1-208ENST00000544327 CCDC129Q6ZRS4 1044 aa21.07■□□□□ 0.96
SCARB1-208ENST00000544327 FIBPO43427 364 aa21.06■□□□□ 0.96
SCARB1-208ENST00000544327 CYP21A2P08686 494 aa21.06■□□□□ 0.96
SCARB1-208ENST00000544327 DNM1Q05193 864 aaKnown RBP21.06■□□□□ 0.96
SCARB1-208ENST00000544327 LRRC24Q50LG9 513 aa21.06■□□□□ 0.96
SCARB1-208ENST00000544327 NEUROD6Q96NK8 337 aa21.06■□□□□ 0.96
SCARB1-208ENST00000544327 SEC62Q99442 399 aaKnown RBP21.06■□□□□ 0.96
SCARB1-208ENST00000544327 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
SCARB1-208ENST00000544327 PCCAP05165 728 aaPredicted RBP21.06■□□□□ 0.96
SCARB1-208ENST00000544327 HMGB1P09429 215 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms