RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 CTSWP56202 376 aa19.81■□□□□ 0.76
XRCC1-202ENST00000543982 NBPF5PQ86XG9 351 aaPredicted RBP19.81■□□□□ 0.76
XRCC1-202ENST00000543982 SIL1Q9H173 461 aa19.81■□□□□ 0.76
XRCC1-202ENST00000543982 GREM2Q9H772 168 aa19.81■□□□□ 0.76
XRCC1-202ENST00000543982 TSHZ2Q9NRE2 1034 aa19.81■□□□□ 0.76
XRCC1-202ENST00000543982 OTUD7AQ8TE49 926 aaPredicted RBP19.81■□□□□ 0.76
XRCC1-202ENST00000543982 HMGB2P26583 209 aaKnown RBP19.8■□□□□ 0.76
XRCC1-202ENST00000543982 POLRMTO00411 1230 aaKnown RBP19.79■□□□□ 0.76
XRCC1-202ENST00000543982 SLC10A5Q5PT55 438 aa19.79■□□□□ 0.76
XRCC1-202ENST00000543982 PUS3Q9BZE2 481 aaKnown RBP19.79■□□□□ 0.76
XRCC1-202ENST00000543982 SASH1O94885 1247 aa19.78■□□□□ 0.76
XRCC1-202ENST00000543982 FLAD1Q8NFF5 587 aa19.78■□□□□ 0.76
XRCC1-202ENST00000543982 IL1RAPL2Q9NP60 686 aa19.78■□□□□ 0.76
XRCC1-202ENST00000543982 COPRSQ9NQ92 184 aa19.78■□□□□ 0.76
XRCC1-202ENST00000543982 SEC31BQ9NQW1 1179 aa19.78■□□□□ 0.76
XRCC1-202ENST00000543982 SERPINB2P05120 415 aa19.77■□□□□ 0.76
XRCC1-202ENST00000543982 TPTE2Q6XPS3 522 aa19.77■□□□□ 0.76
XRCC1-202ENST00000543982 LRRC24Q50LG9 513 aa19.77■□□□□ 0.75
XRCC1-202ENST00000543982 PRR5LQ6MZQ0 368 aa19.77■□□□□ 0.75
XRCC1-202ENST00000543982 CARMIL3Q8ND23 1372 aa19.77■□□□□ 0.75
XRCC1-202ENST00000543982 ITGA6P23229 1130 aa19.76■□□□□ 0.75
XRCC1-202ENST00000543982 GTF2E1P29083 439 aaPredicted RBP19.76■□□□□ 0.75
XRCC1-202ENST00000543982 ATG9AQ7Z3C6 839 aa19.76■□□□□ 0.75
XRCC1-202ENST00000543982 RHPN1Q8TCX5 695 aa19.76■□□□□ 0.75
XRCC1-202ENST00000543982 COL4A1P02462 1669 aa19.76■□□□□ 0.75
XRCC1-202ENST00000543982 COL24A1Q17RW2 1714 aa19.76■□□□□ 0.75
XRCC1-202ENST00000543982 NYXQ9GZU5 481 aa19.75■□□□□ 0.75
XRCC1-202ENST00000543982 NLGN1Q8N2Q7 840 aa19.75■□□□□ 0.75
XRCC1-202ENST00000543982 LRRCC1Q9C099 1032 aa19.75■□□□□ 0.75
XRCC1-202ENST00000543982 MMP10P09238 476 aa19.74■□□□□ 0.75
XRCC1-202ENST00000543982 CCDC57Q2TAC2 916 aa19.74■□□□□ 0.75
XRCC1-202ENST00000543982 DDX60Q8IY21 1712 aaKnown RBP19.74■□□□□ 0.75
XRCC1-202ENST00000543982 RAB11FIP3O75154 756 aa19.74■□□□□ 0.75
XRCC1-202ENST00000543982 IFIT5Q13325 482 aaKnown RBP19.74■□□□□ 0.75
XRCC1-202ENST00000543982 CNBD1Q8NA66 436 aa19.74■□□□□ 0.75
XRCC1-202ENST00000543982 G3BP1Q13283 466 aaKnown RBP eCLIP19.73■□□□□ 0.75
XRCC1-202ENST00000543982 OS9Q13438 667 aaPredicted RBP19.73■□□□□ 0.75
XRCC1-202ENST00000543982 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
XRCC1-202ENST00000543982 SLC51AQ86UW1 340 aa19.72■□□□□ 0.75
XRCC1-202ENST00000543982 PLEKHM2Q8IWE5 1019 aa19.72■□□□□ 0.75
XRCC1-202ENST00000543982 TFCP2Q12800 502 aa19.72■□□□□ 0.75
XRCC1-202ENST00000543982 KIF1BPQ96EK5 621 aa19.72■□□□□ 0.75
XRCC1-202ENST00000543982 ANKRD18BA2A2Z9 1011 aa19.71■□□□□ 0.75
XRCC1-202ENST00000543982 EYA2O00167 538 aa19.71■□□□□ 0.75
XRCC1-202ENST00000543982 TSHZ3Q63HK5 1081 aa19.71■□□□□ 0.75
XRCC1-202ENST00000543982 RIPOR2Q9Y4F9 1068 aa19.7■□□□□ 0.74
XRCC1-202ENST00000543982 SALL3Q9BXA9 1300 aa19.7■□□□□ 0.74
XRCC1-202ENST00000543982 NPHP1O15259 732 aa19.7■□□□□ 0.74
XRCC1-202ENST00000543982 CCDC152Q4G0S7 254 aa19.7■□□□□ 0.74
XRCC1-202ENST00000543982 HSP90AB4PQ58FF6 505 aa19.7■□□□□ 0.74
XRCC1-202ENST00000543982 EAF2Q96CJ1 260 aaPredicted RBP19.7■□□□□ 0.74
XRCC1-202ENST00000543982 NLRP3Q96P20 1036 aa19.7■□□□□ 0.74
XRCC1-202ENST00000543982 TNRC6CQ9HCJ0 1690 aaKnown RBP19.69■□□□□ 0.74
XRCC1-202ENST00000543982 R3HDM1Q15032 1099 aaKnown RBP19.68■□□□□ 0.74
XRCC1-202ENST00000543982 CELF1Q92879 486 aaKnown RBP19.68■□□□□ 0.74
XRCC1-202ENST00000543982 TLR7Q9NYK1 1049 aaKnown RBP19.68■□□□□ 0.74
XRCC1-202ENST00000543982 TAF7LQ5H9L4 462 aa19.68■□□□□ 0.74
XRCC1-202ENST00000543982 LDHAL6AQ6ZMR3 332 aa19.68■□□□□ 0.74
XRCC1-202ENST00000543982 RTL9Q8NET4 1388 aa19.67■□□□□ 0.74
XRCC1-202ENST00000543982 CIAO1O76071 339 aa19.67■□□□□ 0.74
XRCC1-202ENST00000543982 CCDC8Q9H0W5 538 aaPredicted RBP19.67■□□□□ 0.74
XRCC1-202ENST00000543982 PARP3Q9Y6F1 533 aa19.66■□□□□ 0.74
XRCC1-202ENST00000543982 HSP90B1P14625 803 aaKnown RBP19.66■□□□□ 0.74
XRCC1-202ENST00000543982 IL15P40933 162 aaPredicted RBP19.66■□□□□ 0.74
XRCC1-202ENST00000543982 ERC1Q8IUD2 1116 aa19.66■□□□□ 0.74
XRCC1-202ENST00000543982 HELBQ8NG08 1087 aaPredicted RBP19.66■□□□□ 0.74
XRCC1-202ENST00000543982 WTIPA6NIX2 430 aaPredicted RBP19.65■□□□□ 0.74
XRCC1-202ENST00000543982 SNAP23O00161 211 aa19.65■□□□□ 0.74
XRCC1-202ENST00000543982 ZBTB7AO95365 584 aa19.65■□□□□ 0.74
XRCC1-202ENST00000543982 PDE1AP54750 535 aa19.65■□□□□ 0.74
XRCC1-202ENST00000543982 ST5P78524 1137 aa19.65■□□□□ 0.74
XRCC1-202ENST00000543982 AACSQ86V21 672 aa19.65■□□□□ 0.74
XRCC1-202ENST00000543982 LAMB2P55268 1798 aa19.65■□□□□ 0.74
XRCC1-202ENST00000543982 PSDA5PKW4 1024 aaPredicted RBP19.64■□□□□ 0.74
XRCC1-202ENST00000543982 TIMM10P62072 90 aa19.64■□□□□ 0.74
XRCC1-202ENST00000543982 CRY2Q49AN0 593 aa19.64■□□□□ 0.74
XRCC1-202ENST00000543982 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.74
XRCC1-202ENST00000543982 RIC1Q4ADV7 1423 aa19.64■□□□□ 0.73
XRCC1-202ENST00000543982 KLRG2A4D1S0 409 aaPredicted RBP19.64■□□□□ 0.73
XRCC1-202ENST00000543982 GSPT1P15170 499 aaKnown RBP19.64■□□□□ 0.73
XRCC1-202ENST00000543982 TNNI3KQ59H18 835 aa19.64■□□□□ 0.73
XRCC1-202ENST00000543982 VGLL2Q8N8G2 317 aa19.64■□□□□ 0.73
XRCC1-202ENST00000543982 CNNM1Q9NRU3 951 aa19.64■□□□□ 0.73
XRCC1-202ENST00000543982 FPGT-TNNI3KV9GXZ4 949 aa19.64■□□□□ 0.73
XRCC1-202ENST00000543982 QSER1Q2KHR3 1735 aa19.64■□□□□ 0.73
XRCC1-202ENST00000543982 MYH3P11055 1940 aa19.63■□□□□ 0.73
XRCC1-202ENST00000543982 CLASRPQ8N2M8 674 aaKnown RBP19.63■□□□□ 0.73
XRCC1-202ENST00000543982 TAF1P21675 1872 aa19.63■□□□□ 0.73
XRCC1-202ENST00000543982 ATF5Q9Y2D1 282 aaPredicted RBP19.63■□□□□ 0.73
XRCC1-202ENST00000543982 RBM19Q9Y4C8 960 aaKnown RBP19.63■□□□□ 0.73
XRCC1-202ENST00000543982 TAF5LO75529 589 aa19.62■□□□□ 0.73
XRCC1-202ENST00000543982 MX1P20591 662 aa19.62■□□□□ 0.73
XRCC1-202ENST00000543982 BRIP1Q9BX63 1249 aa19.62■□□□□ 0.73
XRCC1-202ENST00000543982 STAP2Q9UGK3 403 aa19.62■□□□□ 0.73
XRCC1-202ENST00000543982 DBNLQ9UJU6 430 aaKnown RBP19.62■□□□□ 0.73
XRCC1-202ENST00000543982 RPS8P62241 208 aaKnown RBP19.61■□□□□ 0.73
XRCC1-202ENST00000543982 METTL24Q5JXM2 366 aa19.61■□□□□ 0.73
XRCC1-202ENST00000543982 ANKRD18AQ8IVF6 992 aa19.61■□□□□ 0.73
XRCC1-202ENST00000543982 DBNDD2Q9BQY9 259 aa19.61■□□□□ 0.73
XRCC1-202ENST00000543982 CEP126Q9P2H0 1117 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms