RNA–Protein interactions for RNA: ENST00000543604.1

AC053513.1-201, humanhuman

TSL 3 BASIC

Gene AC053513.1, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC053513.1-201ENST00000543604 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
AC053513.1-201ENST00000543604 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
AC053513.1-201ENST00000543604 LOC102724428A0A0B4J2F2 783 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 LCE2BO14633 110 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 SPTLC1O15269 473 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 CYP27B1O15528 508 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 SIK1P57059 783 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 TGFB2P61812 414 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 MTMR2Q13614 643 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 PIGBQ92521 554 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 PKD2L1Q9P0L9 805 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 DOT1LQ8TEK3 1739 aa11.14□□□□□ -0.63
AC053513.1-201ENST00000543604 PRR20EP86478 221 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 PRR20CP86479 221 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 PRR20DP86480 221 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 PRR20BP86481 221 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 PRR20AP86496 221 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 CSPP1Q1MSJ5 1256 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 AMIGO3Q86WK7 504 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 TUBGCP6Q96RT7 1819 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 INSRP06213 1382 aa11.13□□□□□ -0.63
AC053513.1-201ENST00000543604 FYB1O15117 783 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 MMP10P09238 476 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 GJA5P36382 358 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 HSP90AB2PQ58FF8 381 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 MYSM1Q5VVJ2 828 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 TRAF7Q6Q0C0 670 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 C16orf71Q8IYS4 520 aaPredicted RBP11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 SPG7Q9UQ90 795 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 BCS1LQ9Y276 419 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 KIF24Q5T7B8 1368 aa11.12□□□□□ -0.63
AC053513.1-201ENST00000543604 TRIM32Q13049 653 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 ARHGAP27Q6ZUM4 889 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 SMIM5Q71RC9 77 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 LINC00116Q8NCU8 138 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 TESK2Q96S53 571 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 NUDT12Q9BQG2 462 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 GGNBP2Q9H3C7 697 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 TMOD3Q9NYL9 352 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 LIMD1Q9UGP4 676 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 FLT4P35916 1363 aa11.11□□□□□ -0.63
AC053513.1-201ENST00000543604 ST20-MTHFSA0A0A6YYL1 179 aa11.1□□□□□ -0.63
AC053513.1-201ENST00000543604 TMF1P82094 1093 aa11.1□□□□□ -0.63
AC053513.1-201ENST00000543604 FSTL1Q12841 308 aa11.1□□□□□ -0.63
AC053513.1-201ENST00000543604 TRAPPC3LQ5T215 181 aa11.1□□□□□ -0.63
AC053513.1-201ENST00000543604 PTCRAQ6ISU1 281 aaPredicted RBP11.1□□□□□ -0.63
AC053513.1-201ENST00000543604 KDM4CQ9H3R0 1056 aa11.1□□□□□ -0.63
AC053513.1-201ENST00000543604 C5P01031 1676 aa11.09□□□□□ -0.63
AC053513.1-201ENST00000543604 A0A0G2JLW4 131 aa11.09□□□□□ -0.63
AC053513.1-201ENST00000543604 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
AC053513.1-201ENST00000543604 NMRK2Q9NPI5 230 aa11.09□□□□□ -0.63
AC053513.1-201ENST00000543604 CCDC87Q9NVE4 849 aa11.09□□□□□ -0.63
AC053513.1-201ENST00000543604 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
AC053513.1-201ENST00000543604 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
AC053513.1-201ENST00000543604 ASAP1Q9ULH1 1129 aa11.08□□□□□ -0.64
AC053513.1-201ENST00000543604 C4BP0C0L5 1744 aa11.08□□□□□ -0.64
AC053513.1-201ENST00000543604 KDM2BQ8NHM5 1336 aa11.08□□□□□ -0.64
AC053513.1-201ENST00000543604 TONSLQ96HA7 1378 aa11.07□□□□□ -0.64
AC053513.1-201ENST00000543604 CFAP99D6REC4 459 aa11.07□□□□□ -0.64
AC053513.1-201ENST00000543604 ITPK1Q13572 414 aa11.07□□□□□ -0.64
AC053513.1-201ENST00000543604 JMYQ8N9B5 988 aa11.07□□□□□ -0.64
AC053513.1-201ENST00000543604 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
AC053513.1-201ENST00000543604 POLR3EQ9NVU0 708 aa11.07□□□□□ -0.64
AC053513.1-201ENST00000543604 PARP3Q9Y6F1 533 aa11.07□□□□□ -0.64
AC053513.1-201ENST00000543604 PXDNLA1KZ92 1463 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 PLEKHG2Q9H7P9 1386 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 FAM187AA6NFU0 413 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 PPM1GO15355 546 aaPredicted RBP11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 DPEP1P16444 411 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 RFC4P35249 363 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 QPCTQ16769 361 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 CDCA8Q53HL2 280 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 C9orf131Q5VYM1 1079 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 IFNL2Q8IZJ0 200 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 FAM117AQ9C073 453 aa11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 CICQ96RK0 1608 aaPredicted RBP11.06□□□□□ -0.64
AC053513.1-201ENST00000543604 CCNYL3P0C7X3 344 aa11.05□□□□□ -0.64
AC053513.1-201ENST00000543604 PTPRNQ16849 979 aa11.05□□□□□ -0.64
AC053513.1-201ENST00000543604 PKDCCQ504Y2 493 aa11.05□□□□□ -0.64
AC053513.1-201ENST00000543604 RC3H1Q5TC82 1133 aaKnown RBP11.05□□□□□ -0.64
AC053513.1-201ENST00000543604 PRPF38BQ5VTL8 546 aaKnown RBP11.05□□□□□ -0.64
AC053513.1-201ENST00000543604 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
AC053513.1-201ENST00000543604 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
AC053513.1-201ENST00000543604 PHKG2P15735 406 aa11.04□□□□□ -0.64
AC053513.1-201ENST00000543604 SKOR1P84550 965 aa11.04□□□□□ -0.64
AC053513.1-201ENST00000543604 DALRD3Q5D0E6 543 aaKnown RBP11.04□□□□□ -0.64
AC053513.1-201ENST00000543604 DESI1Q6ICB0 168 aa11.04□□□□□ -0.64
AC053513.1-201ENST00000543604 TNS4Q8IZW8 715 aa11.04□□□□□ -0.64
AC053513.1-201ENST00000543604 EMILIN1Q9Y6C2 1016 aa11.04□□□□□ -0.64
AC053513.1-201ENST00000543604 C10orf71Q711Q0 1435 aa11.03□□□□□ -0.64
AC053513.1-201ENST00000543604 ERVV-2B6SEH9 535 aa11.03□□□□□ -0.64
AC053513.1-201ENST00000543604 DGAT1O75907 488 aa11.03□□□□□ -0.64
AC053513.1-201ENST00000543604 GYS1P13807 737 aa11.03□□□□□ -0.64
AC053513.1-201ENST00000543604 CLK2P49760 499 aaKnown RBP11.03□□□□□ -0.64
AC053513.1-201ENST00000543604 HTRA3P83110 453 aa11.03□□□□□ -0.64
AC053513.1-201ENST00000543604 SMC1BQ8NDV3 1235 aa11.03□□□□□ -0.64
AC053513.1-201ENST00000543604 RSPH6AQ9H0K4 717 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms