RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 LMBR1LQ6UX01 489 aa7.35□□□□□ -1.23
ABCF1-207ENST00000542772 C3orf67Q6ZVT6 689 aa7.35□□□□□ -1.23
ABCF1-207ENST00000542772 CCDC24Q8N4L8 307 aa7.35□□□□□ -1.23
ABCF1-207ENST00000542772 CRAMP1Q96RY5 1269 aa7.35□□□□□ -1.23
ABCF1-207ENST00000542772 BICC1Q9H694 974 aaKnown RBP7.35□□□□□ -1.23
ABCF1-207ENST00000542772 FBXO3Q9UK99 471 aa7.35□□□□□ -1.23
ABCF1-207ENST00000542772 PCDHB15Q9Y5E8 787 aa7.35□□□□□ -1.23
ABCF1-207ENST00000542772 LRRFIP2Q9Y608 721 aaKnown RBP7.35□□□□□ -1.23
ABCF1-207ENST00000542772 MYH3P11055 1940 aa7.35□□□□□ -1.23
ABCF1-207ENST00000542772 ABCC12Q96J65 1359 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 LAMB2P55268 1798 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 H0YIN7 160 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 BBOX1O75936 387 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 NPR1P16066 1061 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 ALDH1B1P30837 517 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 CTSWP56202 376 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 PTPN12Q05209 780 aaKnown RBP7.34□□□□□ -1.23
ABCF1-207ENST00000542772 CCDC152Q4G0S7 254 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 STYK1Q6J9G0 422 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 MASTLQ96GX5 879 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 COPRSQ9NQ92 184 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 NOP58Q9Y2X3 529 aaKnown RBP7.34□□□□□ -1.23
ABCF1-207ENST00000542772 C10orf71Q711Q0 1435 aa7.34□□□□□ -1.23
ABCF1-207ENST00000542772 PNMA6EA0A0J9YXQ4 647 aa7.33□□□□□ -1.24
ABCF1-207ENST00000542772 RPS8P62241 208 aaKnown RBP7.33□□□□□ -1.24
ABCF1-207ENST00000542772 IRX6P78412 446 aaPredicted RBP7.33□□□□□ -1.24
ABCF1-207ENST00000542772 HDAC1Q13547 482 aaPredicted RBP7.33□□□□□ -1.24
ABCF1-207ENST00000542772 CCDC57Q2TAC2 916 aa7.33□□□□□ -1.24
ABCF1-207ENST00000542772 C7orf43Q8WVR3 580 aa7.33□□□□□ -1.24
ABCF1-207ENST00000542772 RBM17Q96I25 401 aaKnown RBP7.33□□□□□ -1.24
ABCF1-207ENST00000542772 GREM2Q9H772 168 aa7.33□□□□□ -1.24
ABCF1-207ENST00000542772 DCTPP1Q9H773 170 aa7.33□□□□□ -1.24
ABCF1-207ENST00000542772 SEC31BQ9NQW1 1179 aa7.33□□□□□ -1.24
ABCF1-207ENST00000542772 RIPOR2Q9Y4F9 1068 aa7.33□□□□□ -1.24
ABCF1-207ENST00000542772 ANKRD18BA2A2Z9 1011 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 NPHP1O15259 732 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 SRGAP3O43295 1099 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 ITGA6P23229 1130 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 IFIT5Q13325 482 aaKnown RBP7.32□□□□□ -1.24
ABCF1-207ENST00000542772 GRAPQ13588 217 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 DDX46Q7L014 1031 aaKnown RBP7.32□□□□□ -1.24
ABCF1-207ENST00000542772 TMC4Q7Z404 712 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 C2CD5Q86YS7 1000 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 GRAPLQ8TC17 118 aaPredicted RBP7.32□□□□□ -1.24
ABCF1-207ENST00000542772 SYT17Q9BSW7 474 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 C1orf115Q9H7X2 142 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 BSDC1Q9NW68 430 aaPredicted RBP7.32□□□□□ -1.24
ABCF1-207ENST00000542772 KIAA1551Q9HCM1 1747 aa7.32□□□□□ -1.24
ABCF1-207ENST00000542772 A0A0G2JLW4 131 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 HMMRO75330 724 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 CIAO1O76071 339 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 IGHDP01880 384 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 NEFLP07196 543 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 DPEP1P16444 411 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 TAF1P21675 1872 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 CHRNA5P30532 468 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 FAM161AQ3B820 660 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 ATG9AQ7Z3C6 839 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 CELF1Q92879 486 aaKnown RBP7.31□□□□□ -1.24
ABCF1-207ENST00000542772 CNKSR1Q969H4 720 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 CDC5LQ99459 802 aaKnown RBP7.31□□□□□ -1.24
ABCF1-207ENST00000542772 RWDD1Q9H446 243 aaPredicted RBP7.31□□□□□ -1.24
ABCF1-207ENST00000542772 PIM2Q9P1W9 311 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 TNRC6CQ9HCJ0 1690 aaKnown RBP7.31□□□□□ -1.24
ABCF1-207ENST00000542772 DLEC1Q9Y238 1755 aa7.31□□□□□ -1.24
ABCF1-207ENST00000542772 EYA2O00167 538 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 RAB11FIP3O75154 756 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 SASH1O94885 1247 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 GRIPAP1Q4V328 841 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 LDHAL6AQ6ZMR3 332 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 ANKRD18AQ8IVF6 992 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 SMC5Q8IY18 1101 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 TTLL6Q8N841 843 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 RPGRQ92834 1020 aaKnown RBP7.3□□□□□ -1.24
ABCF1-207ENST00000542772 ZNF594Q96JF6 807 aaPredicted RBP7.3□□□□□ -1.24
ABCF1-207ENST00000542772 CCDC85AQ96PX6 553 aaPredicted RBP7.3□□□□□ -1.24
ABCF1-207ENST00000542772 PUS3Q9BZE2 481 aaKnown RBP7.3□□□□□ -1.24
ABCF1-207ENST00000542772 FHDC1Q9C0D6 1143 aaPredicted RBP7.3□□□□□ -1.24
ABCF1-207ENST00000542772 PPP4R2Q9NY27 417 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 PODXL2Q9NZ53 605 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 MINPP1Q9UNW1 487 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 ATP6V0A2Q9Y487 856 aa7.3□□□□□ -1.24
ABCF1-207ENST00000542772 COL4A1P02462 1669 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 ZBTB22O15209 634 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 SURF6O75683 361 aaKnown RBP7.29□□□□□ -1.24
ABCF1-207ENST00000542772 IGHMBP2P38935 993 aaKnown RBP7.29□□□□□ -1.24
ABCF1-207ENST00000542772 IL15P40933 162 aaPredicted RBP7.29□□□□□ -1.24
ABCF1-207ENST00000542772 G3BP1Q13283 466 aaKnown RBP eCLIP7.29□□□□□ -1.24
ABCF1-207ENST00000542772 LRRC24Q50LG9 513 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 HSP90AB4PQ58FF6 505 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 CC2D2BQ6DHV5 1058 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 VGLL2Q8N8G2 317 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 NLGN2Q8NFZ4 835 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 KLHDC4Q8TBB5 520 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 ZNF622Q969S3 477 aaKnown RBP eCLIP7.29□□□□□ -1.242e-16■■■■■ 28.7
ABCF1-207ENST00000542772 GCC1Q96CN9 775 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 MPHOSPH8Q99549 860 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 GPR108Q9NPR9 543 aa7.29□□□□□ -1.24
ABCF1-207ENST00000542772 PA2G4Q9UQ80 394 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms