RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 IGLV1-40P01703 118 aa6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 ARID4AP29374 1257 aaPredicted RBP6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 PSMA6P60900 246 aaKnown RBP6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 GTF2IP78347 998 aa6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 CCINQ13939 588 aa6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 DZIP1LQ8IYY4 767 aaKnown RBP6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 TNS4Q8IZW8 715 aa6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 HSH2DQ96JZ2 352 aa6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 FRRS1LQ9P0K9 344 aa6.38□□□□□ -1.39
GTF2H3-209ENST00000542279 USP17L3A6NCW0 530 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 USP17L4A6NCW7 530 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 USP17L5A8MUK1 530 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 SRPK2P78362 688 aaKnown RBP6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 TYRO3Q06418 890 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 USP17L2Q6R6M4 530 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 USP17L1Q7RTZ2 530 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 DEPDC4Q8N2C3 294 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 TMEM130Q8N3G9 435 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 PHACTR1Q9C0D0 580 aa6.37□□□□□ -1.39
GTF2H3-209ENST00000542279 CARNS1A5YM72 827 aa6.36□□□□□ -1.39
GTF2H3-209ENST00000542279 USTQ9Y2C2 406 aa6.36□□□□□ -1.39
GTF2H3-209ENST00000542279 KIAA1324LA8MWY0 1029 aaPredicted RBP6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 ALX3O95076 343 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 TGFB1P01137 390 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 GLB1P16278 677 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 EPB42P16452 691 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 NFKB1P19838 968 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 ILDR2Q71H61 639 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 BTLAQ7Z6A9 289 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 NFATC2IPQ8NCF5 419 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 ZNF280CQ8ND82 737 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 GSX2Q9BZM3 304 aa6.35□□□□□ -1.39
GTF2H3-209ENST00000542279 DHX15O43143 795 aaKnown RBP6.34□□□□□ -1.39
GTF2H3-209ENST00000542279 ATG7O95352 703 aa6.34□□□□□ -1.39
GTF2H3-209ENST00000542279 MED26O95402 600 aa6.34□□□□□ -1.39
GTF2H3-209ENST00000542279 PDE4CQ08493 712 aa6.34□□□□□ -1.39
GTF2H3-209ENST00000542279 NCOA4Q13772 614 aa6.34□□□□□ -1.39
GTF2H3-209ENST00000542279 TTC9Q92623 222 aa6.34□□□□□ -1.39
GTF2H3-209ENST00000542279 VRTNQ9H8Y1 702 aa6.34□□□□□ -1.39
GTF2H3-209ENST00000542279 RBM19Q9Y4C8 960 aaKnown RBP6.34□□□□□ -1.39
GTF2H3-209ENST00000542279 SH3PXD2AQ5TCZ1 1133 aa6.33□□□□□ -1.4
GTF2H3-209ENST00000542279 TRIM50Q86XT4 487 aa6.33□□□□□ -1.4
GTF2H3-209ENST00000542279 PLEKHM2Q8IWE5 1019 aa6.33□□□□□ -1.4
GTF2H3-209ENST00000542279 F8W735 103 aaPredicted RBP6.32□□□□□ -1.4
GTF2H3-209ENST00000542279 DLL1O00548 723 aa6.32□□□□□ -1.4
GTF2H3-209ENST00000542279 PERM1Q5SV97 790 aa6.32□□□□□ -1.4
GTF2H3-209ENST00000542279 KANK4Q5T7N3 995 aaPredicted RBP6.32□□□□□ -1.4
GTF2H3-209ENST00000542279 NAGPAQ9UK23 515 aa6.32□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L15C9J2P7 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L10C9JJH3 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L13C9JLJ4 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L12C9JPN9 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L11C9JVI0 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L21D6R901 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L18D6R9N7 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L22D6RA61 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L17D6RBQ6 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L19D6RCP7 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L20D6RJB6 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 PPP1R12BO60237 982 aaPredicted RBP6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 HIRAP54198 1017 aaPredicted RBP6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 EPHA4P54764 986 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 USP17L24Q0WX57 530 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 CRTC2Q53ET0 693 aaPredicted RBP6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 MAP4K3Q8IVH8 894 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 STK32AQ8WU08 396 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 LPIN3Q9BQK8 851 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 SRA1Q9HD15 236 aaKnown RBP6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 MKRN1Q9UHC7 482 aaKnown RBP6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 ZMIZ1Q9ULJ6 1067 aa6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 NOVA2Q9UNW9 492 aaKnown RBP6.31□□□□□ -1.4
GTF2H3-209ENST00000542279 TMEM88BA6NKF7 163 aa6.3□□□□□ -1.4
GTF2H3-209ENST00000542279 MAP3K6O95382 1288 aa6.3□□□□□ -1.4
GTF2H3-209ENST00000542279 ATP1A2P50993 1020 aa6.3□□□□□ -1.4
GTF2H3-209ENST00000542279 ALDH16A1Q8IZ83 802 aa6.3□□□□□ -1.4
GTF2H3-209ENST00000542279 CEP41Q9BYV8 373 aa6.3□□□□□ -1.4
GTF2H3-209ENST00000542279 SMG9Q9H0W8 520 aaKnown RBP6.3□□□□□ -1.4
GTF2H3-209ENST00000542279 RBSNQ9H1K0 784 aa6.3□□□□□ -1.4
GTF2H3-209ENST00000542279 FAM196BA6NMK8 535 aa6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 DEAF1O75398 565 aaPredicted RBP6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 RASA1P20936 1047 aa6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 JAG1P78504 1218 aa6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 NFIAQ12857 509 aa6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 GRIK5Q16478 980 aa6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 TMEM164Q5U3C3 297 aa6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 LARP1Q6PKG0 1096 aaKnown RBP6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 DHX32Q7L7V1 743 aaKnown RBP6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 TRPM4Q8TD43 1214 aa6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 ZNF594Q96JF6 807 aaPredicted RBP6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 TSPAN10Q9H1Z9 355 aaPredicted RBP6.29□□□□□ -1.4
GTF2H3-209ENST00000542279 BRD1O95696 1058 aa6.28□□□□□ -1.4
GTF2H3-209ENST00000542279 EIF2AK2P19525 551 aaKnown RBP6.28□□□□□ -1.4
GTF2H3-209ENST00000542279 MLLT1Q03111 559 aaPredicted RBP6.28□□□□□ -1.4
GTF2H3-209ENST00000542279 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
GTF2H3-209ENST00000542279 CCDC102BQ68D86 513 aa6.28□□□□□ -1.4
GTF2H3-209ENST00000542279 KRT25Q7Z3Z0 450 aa6.28□□□□□ -1.4
GTF2H3-209ENST00000542279 IL22RA1Q8N6P7 574 aa6.28□□□□□ -1.4
GTF2H3-209ENST00000542279 TPCN2Q8NHX9 752 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms