RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
VARS2-212ENST00000542001 HSPA4P34932 840 aa18.82■□□□□ 0.6
VARS2-212ENST00000542001 TSR1Q2NL82 804 aaKnown RBP18.82■□□□□ 0.6
VARS2-212ENST00000542001 BEND3Q5T5X7 828 aa18.82■□□□□ 0.6
VARS2-212ENST00000542001 NOL10Q9BSC4 688 aaKnown RBP18.82■□□□□ 0.6
VARS2-212ENST00000542001 RRP9O43818 475 aaKnown RBP18.82■□□□□ 0.6
VARS2-212ENST00000542001 PTGS1P23219 599 aa18.82■□□□□ 0.6
VARS2-212ENST00000542001 NACAP1Q9BZK3 213 aa18.82■□□□□ 0.6
VARS2-212ENST00000542001 HOOK1Q9UJC3 728 aaKnown RBP18.82■□□□□ 0.6
VARS2-212ENST00000542001 A0A087WWV3 80 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 TPM1P09493 284 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 SLC9C2Q5TAH2 1124 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 CPLX3Q8WVH0 158 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 INTS4Q96HW7 963 aaKnown RBP18.81■□□□□ 0.6
VARS2-212ENST00000542001 EFCAB6Q5THR3 1501 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 TTC41PQ6P2S7 1318 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 IGSF3O75054 1194 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 BRD1O95696 1058 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 NOLC1Q14978 699 aaKnown RBP eCLIP18.81■□□□□ 0.6
VARS2-212ENST00000542001 SLFNL1Q499Z3 407 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 TNNT1P13805 278 aa18.81■□□□□ 0.6
VARS2-212ENST00000542001 DHX8Q14562 1220 aaKnown RBP18.81■□□□□ 0.6
VARS2-212ENST00000542001 TYRO3Q06418 890 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 AKAP2Q9Y2D5 859 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 PLXNC1O60486 1568 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 MLH3Q9UHC1 1453 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 UNC13BO14795 1591 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 KIF2CQ99661 725 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 FAM135BQ49AJ0 1406 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 ABCC3O15438 1527 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 KIAA0232Q92628 1395 aa18.8■□□□□ 0.6
VARS2-212ENST00000542001 GCKRQ14397 625 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 ZKSCAN3Q9BRR0 538 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 TSPOAP1O95153 1857 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 ANKRD18BA2A2Z9 1011 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 ATP2B3Q16720 1220 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
VARS2-212ENST00000542001 JMYQ8N9B5 988 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 SLC26A6Q9BXS9 759 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 LARGE1O95461 756 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 PODXL2Q9NZ53 605 aa18.79■□□□□ 0.6
VARS2-212ENST00000542001 A0A1B0GVL5 298 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 PTPDC1A2A3K4 754 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 GOLGA8AA7E2F4 631 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 TNNI3KQ59H18 835 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 TTLL7Q6ZT98 887 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 DDX19AQ9NUU7 478 aaKnown RBP18.78■□□□□ 0.6
VARS2-212ENST00000542001 FPGT-TNNI3KV9GXZ4 949 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 ABCA6Q8N139 1617 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 RNF17Q9BXT8 1623 aaKnown RBP18.78■□□□□ 0.6
VARS2-212ENST00000542001 TET3O43151 1660 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 MIGA1Q8NAN2 632 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 A0A1B0GUL7 405 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 TMEM67Q5HYA8 995 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 TMC6Q7Z403 805 aa18.78■□□□□ 0.6
VARS2-212ENST00000542001 FSD2A1L4K1 749 aa18.77■□□□□ 0.6
VARS2-212ENST00000542001 XBP1P17861 261 aa18.77■□□□□ 0.6
VARS2-212ENST00000542001 IGHMBP2P38935 993 aaKnown RBP18.77■□□□□ 0.6
VARS2-212ENST00000542001 PDCL2Q8N4E4 241 aa18.77■□□□□ 0.6
VARS2-212ENST00000542001 C19orf44Q9H6X5 657 aa18.77■□□□□ 0.6
VARS2-212ENST00000542001 TPCN1Q9ULQ1 816 aa18.77■□□□□ 0.6
VARS2-212ENST00000542001 SLC3A2P08195 630 aaKnown RBP18.77■□□□□ 0.59
VARS2-212ENST00000542001 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.59
VARS2-212ENST00000542001 SLC12A7Q9Y666 1083 aa18.77■□□□□ 0.59
VARS2-212ENST00000542001 LMOD1P29536 600 aaPredicted RBP18.76■□□□□ 0.59
VARS2-212ENST00000542001 AMOTL1Q8IY63 956 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 ANO10Q9NW15 660 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 IBTKQ9P2D0 1353 aaPredicted RBP18.76■□□□□ 0.59
VARS2-212ENST00000542001 CADPS2Q86UW7 1296 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 AOPEPQ8N6M6 819 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 PRC1O43663 620 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 PTPN14Q15678 1187 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 ZSCAN25Q6NSZ9 544 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 CCDC24Q8N4L8 307 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 FAM200AQ8TCP9 573 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 HMG20BQ9P0W2 317 aa18.76■□□□□ 0.59
VARS2-212ENST00000542001 LIG1P18858 919 aa18.75■□□□□ 0.59
VARS2-212ENST00000542001 SFPQP23246 707 aaKnown RBP eCLIP18.75■□□□□ 0.59
VARS2-212ENST00000542001 ZNF445P59923 1031 aa18.75■□□□□ 0.59
VARS2-212ENST00000542001 MYL10Q9BUA6 226 aa18.75■□□□□ 0.59
VARS2-212ENST00000542001 METTL22Q9BUU2 404 aaPredicted RBP18.75■□□□□ 0.59
VARS2-212ENST00000542001 IGSF1Q8N6C5 1336 aa18.75■□□□□ 0.59
VARS2-212ENST00000542001 NEO1Q92859 1461 aa18.75■□□□□ 0.59
VARS2-212ENST00000542001 METAP2P50579 478 aaKnown RBP eCLIP18.75■□□□□ 0.59
VARS2-212ENST00000542001 BRMS1Q9HCU9 246 aa18.75■□□□□ 0.59
VARS2-212ENST00000542001 HMGB1P09429 215 aaKnown RBP18.74■□□□□ 0.59
VARS2-212ENST00000542001 IARSP41252 1262 aaKnown RBP18.74■□□□□ 0.59
VARS2-212ENST00000542001 ANKRD20A12PQ8NF67 263 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 SPHKAPQ2M3C7 1700 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 NEURL1BA8MQ27 555 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 EXOC5O00471 708 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 RPS6KB1P23443 525 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
VARS2-212ENST00000542001 NAP1L1P55209 391 aaKnown RBP18.74■□□□□ 0.59
VARS2-212ENST00000542001 ZSWIM4Q9H7M6 989 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 ERBB4Q15303 1308 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 MAP3K12Q12852 859 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 ZNF589Q86UQ0 364 aaPredicted RBP18.74■□□□□ 0.59
VARS2-212ENST00000542001 DCAF5Q96JK2 942 aa18.74■□□□□ 0.59
VARS2-212ENST00000542001 SLC52A2Q9HAB3 445 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms